FFCP PHASE1:Hg19::chr8:74205888..74205923,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:74205888..74205923,-
|short_description=p2@RPL7
|description=CAGE_peak_2_at_RPL7_5end
|association_with_transcript=-19bp_to_NM_000971,uc003xzg.2_5end
|Ent...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6129 | |EntrezGene=6129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10363 | |HGNC=10363 | ||
|TSSclassifier=strong | |||
|UniProt=P18124 | |UniProt=P18124 | ||
|association_with_transcript=-19bp_to_NM_000971,uc003xzg.2_5end | |||
|cluster_id=chr8:74205888..74205923,- | |||
|description=CAGE_peak_2_at_RPL7_5end | |||
|id=chr8:74205888..74205923,- | |||
|ontology_enrichment_celltype=CL:0000012!2.99e-16!682;CL:0000548!6.53e-16!679;CL:0000004!6.53e-16!679;CL:0000255!6.53e-16!679;CL:0000066!1.47e-12!254;CL:0002321!1.45e-10!248;CL:0000220!4.92e-10!246;CL:0000055!1.80e-09!180;CL:0000003!5.06e-09!722;CL:0000076!4.84e-07!62;CL:0000144!7.26e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.16e-10,253;CL:0002321,2.62e-09,250;CL:0000076,7.75e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.89e-30!239;DOID:162!1.52e-28!235;DOID:0050686!1.52e-13!137;DOID:305!2.33e-13!106;DOID:2531!1.93e-12!51;DOID:0060083!1.93e-12!51;DOID:0050687!2.69e-12!143;DOID:8692!9.68e-11!31;DOID:1240!2.65e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.78e-12;31!DOID:1240;2.88e-09;39!DOID:2531;1.47e-07;51!DOID:0060083;1.47e-07;51!DOID:1036;4.19e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.00e-29,239;DOID:162,3.04e-28,235;DOID:2531,1.65e-12,51;DOID:0060083,1.65e-12,51;DOID:0050686,1.85e-12,137;DOID:305,3.35e-12,106;DOID:8692,3.98e-12,31;DOID:0050687,1.33e-11,143;DOID:1240,5.48e-11,39;DOID:1036,4.69e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.78e-07;9!UBERON:0001557;1.78e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.18e-07,9 | |||
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| ||
|short_description=p2@RPL7 | |||
}} | }} |
Latest revision as of 01:48, 19 September 2015
Short description: | p2@RPL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL7_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_NM_000971, uc003xzg.2_5end |
EntrezGene: | RPL7 |
HGNC: | 10363 |
UniProt: | P18124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.16e-10 | 253 |
embryonic cell | 2.62e-09 | 250 |
squamous epithelial cell | 7.75e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.00e-29 | 239 |
cancer | 3.04e-28 | 235 |
hematologic cancer | 1.65e-12 | 51 |
immune system cancer | 1.65e-12 | 51 |
organ system cancer | 1.85e-12 | 137 |
carcinoma | 3.35e-12 | 106 |
myeloid leukemia | 3.98e-12 | 31 |
cell type cancer | 1.33e-11 | 143 |
leukemia | 5.48e-11 | 39 |
chronic leukemia | 4.69e-07 | 8 |