FFCP PHASE1:Hg19::chr19:41768412..41768437,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17011 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUJ2 | |||
|association_with_transcript=21bp_to_ENST00000352456,NM_144732,uc002opz.3,uc002oqa.3_5end | |||
|cluster_id=chr19:41768412..41768437,+ | |||
|description=CAGE_peak_14_at_HNRNPUL1_5end | |||
|id=chr19:41768412..41768437,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.33e-08!254;CL:0002319!9.55e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.29e-09;25!CL:0000095;2.39e-07;17!CL:0000039;9.39e-07;7!CL:0000586;9.39e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.84e-10,25;CL:0000095,5.10e-08,17;CL:0000123,5.10e-08,17;CL:0000333,5.08e-07,41;CL:0000066,6.12e-07,253;CL:0000039,6.27e-07,7;CL:0000586,6.27e-07,7;CL:0000243,8.15e-07,15;CL:0000125,8.15e-07,15;CL:0000030,8.15e-07,15;CL:0000339,8.15e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.70e-25!235;DOID:14566!2.52e-23!239;DOID:0050687!5.97e-20!143;DOID:305!1.73e-16!106;DOID:0050686!2.81e-13!137;DOID:3095!5.83e-10!22;DOID:2994!5.83e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.44e-10;22!DOID:2994;1.44e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.10e-22,235;DOID:14566,1.67e-20,239;DOID:0050687,8.23e-16,143;DOID:0050686,4.99e-15,137;DOID:305,7.97e-13,106;DOID:3095,6.05e-11,22;DOID:2994,6.05e-11,22;DOID:3119,9.93e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0000924!3.53e-08!173;UBERON:0006601!3.53e-08!173;UBERON:0005743!4.81e-08!86;UBERON:0001017!1.09e-07!82;UBERON:0004121!1.22e-07!169;UBERON:0000955!9.25e-07!69;UBERON:0006238!9.25e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.02e-07,89 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,1.26343974685366,0.261185628199839,0.982935746006035,0,2.40285509343189,0.791300934685361,0.247532705920093,0.994192127183747,0.672325146451775,0,0.730310090387373,0,2.70866327768933,1.83600622119828,2.19418305034661,2.0036519099174,1.91624195102038,1.88313959392204,0.840547463227464,1.06730766284929,0.708397031823113,0,0.383829398097213,0.154816123316076,0,1.204823675113,1.47901604066715,2.78881922089086,2.70121541726101,0.587200878669695,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0.587237189370939,1.14681968437569,1.32171328579026,0,1.05353633910031,0.590129310341499,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0.445641827540694,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.444859689486181,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.451725357233318,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.579297615531196,0,0,0.383587685530591,0.722878304769133,0.50133791063589,0,1.5905718941022,0,0.850813354476611,0.665188192387692,0.702678285545008,1.0478326039817,1.45718115317017,0.741568885568859,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0,1.59009925893364,1.72046919021225,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,1.00416183829401,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,1.09921046358244,0,0,1.74437620857014,0.993943903390637,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,1.66493170409425,0.576175924479999,2.10889288650417,0,1.1409436430889,0.298897361103602,1.64408298101271,0.323745888736263,0.561803226808994,0.61246251376468,0.61417158655884,0.516628905878827,0,0.247266929278557,0.910161361938026,2.15585442544872,1.17835279767846,1.7516592782075,1.10825646193673,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.339121184620975,0.773043412653187,0,0.573609190778008,10.4897387271452,9.80720285578991,7.32021840077966,6.21966330092223,5.55105871926382,5.83963774521328,0,0,0,0.464367928031979,0,0.828147600278907,0.674338760312407,0.482022059766964,0.661763836394364,1.52515610864684,0.71181185733329,0.539325232640658,0.588664395376038,1.92373578473195,0.738155454624648,0,1.2347220339942,0,0,0,0,1.32438929824395,2.33678033231916,1.54411029268673,0.658501712451753,1.1240175325762,1.10581869652794,1.11106134190236,0.325808305310325,0,0,2.78232971940184,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.716468181622786,1.45316969256981,1.91691339582606,0,0.352193736052904,0.621984346622316,1.58531948758658,0.50496973370552,0.444485260045183,1.52795370223311,0,1.71072446022705,0.411309970813294,0.300343057843917,0.571652865261156,0.897048674762886,1.30788020649984,0.51336800074665,0,3.57656445851882,0,1.06375246633948,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,1.14861935834114,1.42636905040718,0.289562613335158,0.410952645100767,0.537182889719687,1.00876629594175,0.197030760201927,0.431255149719035,0.385029108839245,0.508189248444927,6.50699269288109,1.54657762555539,1.50764638800914,0,0,0,0,0.613457458595699,1.00034104211935,0.813795071099207,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,1.32845119707087,0,0.173767228936166,2.15381273209015,0.686286847621712,0,0,0.106727557803444,1.81876542867756,0,1.5119514666484,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.739144404124282,0.519254429183621,0.232420756919918,2.1754700926492,0.802025881213139,0.552485933615378,0.229628896329213,0,0.262248829918848,3.60959690325929,1.61732207919271,3.92174884588428,0,1.68882606228601,0,0,0.431831832204279,0,0.812839312631559,1.50506932156456,1.78413391131527,3.3243040357149,1.11937377361089,0,0.261435451024901,2.05160100093111,0.656029291399411,0.325378394664303,0.309123034943167,0.732555718546747,0.82509499920588,0.574265537996172,1.30012049207304,1.6068392984416,1.54673149267395,0.462145851343933,0.767518373630648,0.964856007391714,1.82614416276065,1.0151168573996,0.511359764496605,0.890320356467374,0,0,0.510450849978337,0.4046311234222,0,0,1.3940745403212,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0.42793898803392,1.27281299170375,0,0.539617372749944,0.274537029736055,0.353437207037059,0.202182481573316,0,1.26377536871694,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0,0,0,1.73632660280006,0.655894752046633,0.202910376962704,0,0.281695602532241,1.00387946542836,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,3.41525856389144,1.04980416073495,0.673554789078584,0.670302275535787,0,0.847294206991012,2.58303223602738,0,0.443430153536676,1.37834040124176,0,0.764637207142375,0,0.714695326373367,0,0.648473311192717,0,0,1.70918513803957,0,0.490080431962063,1.48642540100575,2.30830740762312,1.84968792705877,2.8696729091188,0.59873811429845,0.766021480529467,1.2700414963433,1.62310970137278,0.280797178113459,2.9670508274315,1.56679895773023,2.50634477090067,1.01575066680962,1.76646882614069,1.00899853595524,1.27753871307098,0.687010689511529,0.614481528616916,1.3420566473545,1.00109485027145,1.56310476321632,2.50565556505718,1.23087398947712,0.540911356951966,0.99921590399346,0,0.935702702041099,0.293016358543788,5.58258400047762,1.5602073798847,0.852408440419239,0,1.18785872333055,1.84296421259539,0.994147647766298,0.703347082052564,0.890469640183247,0.824019371133798,1.26675244876796,0.796991953004279,0.828851746593443,1.0077309914171,1.73856760253663,0.984678443688556,0,0.808815160325942,0.716084698702437,0,0.690503839458535,0,0,1.93866549219044,0.649376687132959,1.99613798001194,1.04171104434093,1.13697999995054,0.724999575434793,1.593108275997,1.27126825146383,1.18193840883968,2.41320361269025,2.62444152044929,0.694499979733169,0,1.20596438625408,3.05163472634166,1.76926815889959,1.47773809476774,0.219385397153973,2.1787692703798,0.83654246567162,0.923403102045565,0.227884111694002,2.99733075704478,1.70539524378567,4.34589487688032,0,0.183195186803725,0.533034776018635,0,0.470940769185074,1.82832850090172,0.902382642468723,0.784250137270958,1.34257269580674,3.03605972358696,2.86085842164682,2.95397290339238,1.14262965711403,3.25112064298064,2.59666367690509,0.995261931078505,0.973033209536731,1.83309043480088,0,0.617819694732514,0.417687798021821,1.61762719153625,0.802577647298789,0.468528891450678,3.64909578431332,2.15231080825299,2.18502341580683,0.394584402849391,0,1.83643656978294,0.31593289814244,1.20258735531594,1.65901106235595,1.32930774541437,2.64793564700399,0.941798755221676,2.38944859545918,2.27687636823834,2.21879476821022,1.38847790668105,1.66587075604442,1.04471047896483,0.698906672968121,0.859930162358083,2.03188295707079,1.60796497589608,1.56019368401098,0.678923115418936,0.706049013532002,1.80784592624426,1.78154502040776,0.596143835108969,0.823040347426423,0.586654148204409,0.721429382263803,0.213452994739353,0.39961921916426,3.02589876023623,3.77970767347522,2.9171149636534,4.89786313159709,0.49701014226173,1.17847017308398,1.76675467895698,1.35983700206033,1.22397861163586,1.44475294950759,0,1.23214841002794,0,0,0.788662062837943,0.558564802544508,0.229160424011684,0,1.59743200399193,1.28767814440971,1.33902874465124,2.68733889946905,0.360299883542404,3.49487848582361,1.49688046383725,1.31865373409866,1.28066733322951,0.984274815147488,1.69346664131569,0.795229689809303,1.77064427945048,2.08979093004525,4.26372253451425,6.23160507043778,0.2249738915515,0.77380195455795,0.789744236554321,0.670869375198532,1.18208560948797,1.62609223218494,1.26720403823288,0.717149357331379,2.1110671705139,0.714695326373367,0,1.27134268827375,0,0,0.653174720218818,2.39460383124975,1.97022049798414,0.340776043570843,0.566560457600628,0.58620893471233,0,0.646414781807753,1.19009341568421,4.61934462287689,0.704815022316672,0.854299300541557,1.41483874589699,0.828478110694391,0,0.592834895693833,1.82688897571344,1.27668251554036,0.544017803369474,0.7520696820681,0,0.655745261419609,5.18278517625773,0,0,0.876336514945499,1.14681839138014,1.22021956690538,1.36612086471044,4.56550495289562,3.37447101497688,0,1.14186133417987,0,2.81000943484129,2.02889440055155,0.447764408660622,0.701139929541673,0,0.189403005275089,0.251567901752575,0.889811221596536,0.457680136793847,0,0.466311601748341,0.295710299979268,0.796483835818512,0,0.310525913752519,0,0,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0,0,0.336749488765919,0,1.92619830407303,1.28664954824955,1.04397716786085,0.453411851024545,0,0,0.537266523244462,1.85280868296583,0.438568099157414,0.530067437837643,0,0.168942440653073,0.512483037175893,1.0362910251936,0,1.24432592536558,0.584580926518165,0.398594520940089,0.981392365535065,0.327609848846413,1.47463745252232,0.633936370075881,0,1.17360902663555,0.688859918643263,0,0,0.979156554036111,0,3.19735928259129,3.23474434190045,3.61711666268562,2.51182167841632,0.678930119816101,2.97604888142356,0.619678821295011,2.23457967189298,0.318004350653419,2.3658523500376,0.80057074828547,0.705351887381368,0,0.899209151350433,0,1.75597244962866,0.615349092722265,1.26035848110859,1.10651603942749,0.484426936895553,2.85538840518309,0.588886311006154,2.94924308369351,0.366857197043358,0.577628330751691,0,0.690359926060101,0.596748666348824,1.27857558193737,1.21023041222112,0.781514011233092,3.66669372273991,0.327543835020193,0.887136517302272,0.87798860003913,0.781078098613847,1.03343398250592,0.887821342714695,2.18789923607288,0.548257766857182,1.98484471355718,2.63806866539431,0.766574565837572,2.14280734351315,0.672567444437648,0.606965604236632,1.82129753081038,0.620916591138472,0.576169937778896,0.685952037749674,1.22345519358297,0.855046056317038,0.945550727071746,1.00108261702862,1.25588948560822,0.942693539496011,2.80272163313789,4.56579360254748,1.51149313853035,0.47775168788705,2.14429632529969,6.63657169277452,1.3948971044175,4.52031507986707,0.801711364730253,0.62164849248911,0.17071847709395,0.691259661814092,0.860454717640555,0.236664001461131,0.511280428554946,1.27016115057279,0.22910686854405,2.17144469965024,0.955538938977433,1.67783147696688,1.66855397145913,0.609589624911347,0.647428837187895,0.718639647993729,2.3196288626764,1.45713297917742,3.74303141539369,3.18321240258189,4.04328308643733,3.16249029709088,10.0045870238341,1.81155412280008,1.15761237161917,1.31135736302374,4.23285566725371,1.71603825227734,0.707029641304878,1.76677620403451,0.594092800654172,0.4226557275834,0,0.281951753939561,0.966868319603658,0.699588091474503,0.535661815816973,1.76447435857846,3.2898960342559,0.730336388246517,0,0.430018749454354,4.25983217921598,0.611923411718232,4.36350690340377,0,0,0.462175628631418,0,3.53265989538221,4.47988845051152,2.15387451719443,3.56960904096936,4.80991329478009,2.11358268930143,7.27051863947888,0.682008283964155,1.07185652062471,0,0.930896962757057,0.426467963801962,1.42838658878244,3.55239004098034,2.29676442894674,1.90624166387043,1.20929600728513,1.0105859447911,0.435433495793923,0,0.673520530145875,0.717222053926764,0.99798106963804,1.13964576055364,2.13454691755431,1.9307228228694,1.3473780315988,0,1.58913877437726,2.03448089157869,0.665756774185513,0.805095174364105,0.320568492303233 | |||
|short_description=p14@HNRNPUL1 | |||
}} |
Latest revision as of 04:07, 18 September 2015
Short description: | p14@HNRNPUL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_HNRNPUL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000352456, NM_144732, uc002opz.3, uc002oqa.3_5end |
EntrezGene: | HNRNPUL1 |
HGNC: | 17011 |
UniProt: | Q9BUJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.84e-10 | 25 |
neuron associated cell | 5.10e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.10e-08 | 17 |
migratory neural crest cell | 5.08e-07 | 41 |
epithelial cell | 6.12e-07 | 253 |
germ line cell | 6.27e-07 | 7 |
germ cell | 6.27e-07 | 7 |
glial cell (sensu Vertebrata) | 8.15e-07 | 15 |
glial cell | 8.15e-07 | 15 |
glioblast | 8.15e-07 | 15 |
glioblast (sensu Vertebrata) | 8.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.02e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.10e-22 | 235 |
disease of cellular proliferation | 1.67e-20 | 239 |
cell type cancer | 8.23e-16 | 143 |
organ system cancer | 4.99e-15 | 137 |
carcinoma | 7.97e-13 | 106 |
germ cell and embryonal cancer | 6.05e-11 | 22 |
germ cell cancer | 6.05e-11 | 22 |
gastrointestinal system cancer | 9.93e-07 | 14 |