FFCP PHASE1:Hg19::chr8:69770351..69770355,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:69770351..69770355,-
|short_description=p@chr8:69770351..69770355,-
|description=CAGE_peak_at_chr8:69770351..69770355,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:69770351..69770355,- | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr8:69770351..69770355,- | |||
|id=chr8:69770351..69770355,- | |||
|ontology_enrichment_celltype=CL:0000188!1.27e-11!9;CL:0000680!1.44e-11!57;CL:0000056!1.44e-11!57;CL:0000355!1.44e-11!57;CL:0000187!7.09e-10!54;CL:0000183!1.16e-08!59;CL:0000393!1.92e-08!60;CL:0000211!1.92e-08!60;CL:0000222!3.35e-08!119;CL:0002504!4.34e-08!3;CL:1000279!4.34e-08!3;CL:1000280!4.34e-08!3;CL:0000055!5.03e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002554;1.76e-11;2!CL:0002595;2.13e-10;5!CL:0002573;1.92e-08;2!CL:0002504;9.51e-08;3!CL:1000279;9.51e-08;3!CL:1000280;9.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.38e-11,2;CL:0002595,2.10e-10,5;CL:0002573,1.92e-08,2;CL:0002504,8.58e-08,3;CL:1000279,8.58e-08,3;CL:1000280,8.58e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.16e-09!14;DOID:120!7.18e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:0060072;1.16e-12;4!DOID:4231;5.98e-12;2!DOID:1907;5.98e-12;2!DOID:201;8.51e-09;6!DOID:0060100;8.51e-09;6!DOID:0060084;5.63e-08;3!DOID:127;5.63e-08;3!DOID:6193;4.09e-07;1!DOID:0060085;7.19e-07;1!DOID:3165;7.19e-07;1!DOID:0060121;7.19e-07;1!DOID:2438;7.19e-07;1!DOID:4418;7.19e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,1.16e-12,4;DOID:4231,7.64e-12,2;DOID:1907,7.64e-12,2;DOID:201,9.59e-09,6;DOID:0060100,9.59e-09,6;DOID:0060084,5.64e-08,3;DOID:127,5.64e-08,3;DOID:6193,4.09e-07,1;DOID:0060085,7.19e-07,1;DOID:3165,7.19e-07,1;DOID:0060121,7.19e-07,1;DOID:2438,7.19e-07,1;DOID:4418,7.19e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.24e-11!61;UBERON:0002036!1.24e-11!61;UBERON:0003082!1.24e-11!61;UBERON:0002385!4.31e-11!63;UBERON:0001015!4.31e-11!63;UBERON:0000383!4.31e-11!63;UBERON:0004290!1.68e-10!70;UBERON:0000486!4.45e-09!82;UBERON:0000914!5.22e-08!83;UBERON:0002329!5.22e-08!83;UBERON:0003077!5.22e-08!83;UBERON:0003059!5.22e-08!83;UBERON:0007282!5.22e-08!83;UBERON:0009618!5.22e-08!83;UBERON:0007285!5.22e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.13e-10;5!UBERON:0001533;2.13e-10;5!UBERON:0003513;1.50e-07;7!UBERON:0001282;6.43e-07;1!UBERON:0009842;6.43e-07;1!UBERON:0003704;6.43e-07;1!UBERON:0001171;6.43e-07;1!UBERON:0001172;6.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.10e-10,5;UBERON:0001533,2.10e-10,5;UBERON:0003513,1.49e-07,7;UBERON:0001282,6.43e-07,1;UBERON:0009842,6.43e-07,1;UBERON:0003704,6.43e-07,1;UBERON:0001171,6.43e-07,1;UBERON:0001172,6.43e-07,1 | |||
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| ||
|short_description=p@chr8:69770351..69770355,- | |||
}} | }} |
Latest revision as of 19:39, 31 July 2015
Short description: | p@chr8:69770351..69770355, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:69770351..69770355, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.38e-11 | 2 |
smooth muscle cell of the subclavian artery | 2.10e-10 | 5 |
Schwann cell | 1.92e-08 | 2 |
enteric smooth muscle cell | 8.58e-08 | 3 |
smooth muscle cell of large intestine | 8.58e-08 | 3 |
smooth muscle cell of colon | 8.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.10e-10 | 5 |
subclavian artery | 2.10e-10 | 5 |
trunk blood vessel | 1.49e-07 | 7 |
intralobular bile duct | 6.43e-07 | 1 |
acinus | 6.43e-07 | 1 |
intrahepatic bile duct | 6.43e-07 | 1 |
portal lobule | 6.43e-07 | 1 |
hepatic acinus | 6.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 1.16e-12 | 4 |
histiocytoma | 7.64e-12 | 2 |
malignant fibroxanthoma | 7.64e-12 | 2 |
connective tissue cancer | 9.59e-09 | 6 |
musculoskeletal system cancer | 9.59e-09 | 6 |
cell type benign neoplasm | 5.64e-08 | 3 |
leiomyoma | 5.64e-08 | 3 |
epithelioid sarcoma | 4.09e-07 | 1 |
organ system benign neoplasm | 7.19e-07 | 1 |
skin benign neoplasm | 7.19e-07 | 1 |
integumentary system benign neoplasm | 7.19e-07 | 1 |
dermis tumor | 7.19e-07 | 1 |
cutaneous fibrous histiocytoma | 7.19e-07 | 1 |