FFCP PHASE1:Hg19::chr19:17375541..17375588,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83878 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24058 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6Y0,Q8N8Y1 | |||
|association_with_transcript=0bp_to_ENST00000252597,NM_031941,uc002nfs.1,uc002nft.1,uc010eam.1,uc010xpk.1_5end | |||
|cluster_id=chr19:17375541..17375588,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_USHBP1_5end | |||
|id=chr19:17375541..17375588,- | |||
|ontology_enrichment_celltype=CL:0002139!5.85e-25!24;CL:0000115!5.51e-23!35;CL:0000071!2.61e-18!18;CL:0002546!2.61e-18!18;CL:0002078!7.37e-16!44;CL:0000213!8.22e-10!57;CL:0000215!8.22e-10!57;CL:1000413!1.76e-09!9;CL:0005020!3.09e-08!6;CL:0002138!3.09e-08!6;CL:0005022!3.09e-08!6;CL:0002543!3.97e-07!6;CL:0002544!7.84e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.98e-31;24!CL:0000115;7.06e-26;36!CL:0000071;1.81e-22;18!CL:0002078;1.86e-14;45!CL:1000413;1.94e-11;9!CL:0002138;5.33e-10;6!CL:0000213;9.52e-10;58!CL:0000215;9.52e-10;58!CL:0002543;1.79e-08;6!CL:0002544;3.80e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.53e-31,24;CL:0000115,6.65e-31,36;CL:0000071,9.44e-23,18;CL:0002546,9.44e-23,18;CL:0002078,1.82e-22,45;CL:0000213,4.68e-15,58;CL:0000215,4.68e-15,58;CL:1000413,1.40e-11,9;CL:0005020,5.25e-10,6;CL:0002138,5.25e-10,6;CL:0005022,5.25e-10,6;CL:0002543,1.31e-08,6;CL:0002544,3.10e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.81e-22;18!CL:0005022;5.33e-10;6!UBERON:0004872;4.08e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.43e-55!115;UBERON:0004111!4.61e-25!241;UBERON:0000025!9.42e-22!194;UBERON:0000477!1.39e-21!286;UBERON:0001049!7.15e-20!57;UBERON:0005068!7.15e-20!57;UBERON:0006241!7.15e-20!57;UBERON:0007135!7.15e-20!57;UBERON:0001986!2.61e-18!18;UBERON:0004638!2.61e-18!18;UBERON:0004852!2.61e-18!18;UBERON:0005743!8.40e-17!86;UBERON:0001017!1.41e-16!82;UBERON:0002616!1.81e-16!59;UBERON:0003080!4.80e-16!42;UBERON:0002780!3.43e-15!41;UBERON:0001890!3.43e-15!41;UBERON:0006240!3.43e-15!41;UBERON:0003075!4.47e-15!86;UBERON:0007284!4.47e-15!86;UBERON:0000955!3.00e-14!69;UBERON:0006238!3.00e-14!69;UBERON:0002346!1.05e-13!90;UBERON:0000487!1.08e-13!22;UBERON:0000073!1.13e-13!94;UBERON:0001016!1.13e-13!94;UBERON:0001893!6.00e-13!34;UBERON:0002020!6.68e-13!34;UBERON:0003528!6.68e-13!34;UBERON:0002791!2.74e-12!33;UBERON:0001869!9.58e-12!32;UBERON:0006914!3.04e-11!25;UBERON:0001950!7.78e-11!20;UBERON:0000483!9.52e-11!309;UBERON:0000119!1.07e-10!312;UBERON:0002619!1.16e-10!22;UBERON:0000055!1.32e-09!69;UBERON:0003915!1.76e-09!9;UBERON:0004700!1.76e-09!9;UBERON:0001917!1.76e-09!9;UBERON:0003056!1.97e-09!61;UBERON:0000956!9.26e-09!25;UBERON:0000203!9.26e-09!25;UBERON:0000153!1.09e-08!129;UBERON:0007811!1.09e-08!129;UBERON:0004872!1.07e-07!84;UBERON:0000033!1.20e-07!123;UBERON:0003914!1.74e-07!118;UBERON:0002298!3.95e-07!8;UBERON:0003103!4.56e-07!69;UBERON:0002049!4.64e-07!79;UBERON:0007798!4.64e-07!79;UBERON:0000468!5.70e-07!659;UBERON:0002465!7.45e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.81e-22;18!UBERON:0001986;1.81e-22;18!UBERON:0004852;1.81e-22;18!UBERON:0000487;3.04e-17;22!UBERON:0006914;1.90e-14;25!UBERON:0007023;2.19e-14;114!UBERON:0003915;1.94e-11;9!UBERON:0004700;1.94e-11;9!UBERON:0001917;1.94e-11;9!UBERON:0002780;5.13e-10;41!UBERON:0001890;5.13e-10;41!UBERON:0001893;1.66e-09;34!UBERON:0000073;3.20e-09;53!UBERON:0002616;3.20e-09;53!UBERON:0003528;3.32e-09;34!UBERON:0002020;3.32e-09;34!UBERON:0002619;6.46e-09;22!UBERON:0000490;6.98e-09;33!UBERON:0001950;8.78e-09;20!UBERON:0001869;9.59e-09;32!UBERON:0002791;1.15e-08;32!UBERON:0002465;1.89e-08;10!UBERON:0000956;1.97e-07;25!UBERON:0000203;1.97e-07;25!UBERON:0001473;3.75e-07;8!UBERON:0004536;3.75e-07;8!UBERON:0006558;3.75e-07;8!UBERON:0001638;4.09e-07;9!UBERON:0003920;4.09e-07;9!UBERON:0004582;4.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.34e-56,114;UBERON:0004111,2.13e-23,240;UBERON:0004638,9.44e-23,18;UBERON:0001986,9.44e-23,18;UBERON:0004852,9.44e-23,18;UBERON:0000025,3.73e-19,192;UBERON:0000487,1.82e-17,22;UBERON:0001049,2.64e-15,56;UBERON:0005068,2.64e-15,56;UBERON:0006241,2.64e-15,56;UBERON:0007135,2.64e-15,56;UBERON:0006914,1.23e-14,25;UBERON:0000073,1.84e-14,53;UBERON:0002616,1.84e-14,53;UBERON:0001017,2.73e-12,81;UBERON:0000055,3.11e-12,68;UBERON:0002780,4.22e-12,41;UBERON:0001890,4.22e-12,41;UBERON:0003080,4.22e-12,41;UBERON:0006240,4.22e-12,41;UBERON:0003915,1.40e-11,9;UBERON:0004700,1.40e-11,9;UBERON:0001917,1.40e-11,9;UBERON:0001893,2.99e-11,34;UBERON:0003528,3.34e-11,34;UBERON:0002020,3.34e-11,34;UBERON:0003075,5.12e-11,82;UBERON:0007284,5.12e-11,82;UBERON:0002346,4.91e-10,86;UBERON:0001016,5.00e-10,89;UBERON:0000955,5.57e-10,68;UBERON:0006238,5.57e-10,68;UBERON:0001869,6.84e-10,32;UBERON:0002791,8.73e-10,32;UBERON:0002049,1.93e-09,78;UBERON:0007798,1.93e-09,78;UBERON:0010314,2.59e-09,132;UBERON:0000483,3.11e-09,306;UBERON:0004872,3.54e-09,83;UBERON:0011216,4.61e-09,223;UBERON:0000119,6.13e-09,309;UBERON:0002619,1.05e-08,22;UBERON:0001950,1.33e-08,20;UBERON:0002465,1.54e-08,10;UBERON:0007500,1.64e-08,59;UBERON:0001981,1.64e-08,59;UBERON:0004537,1.64e-08,59;UBERON:0006965,1.64e-08,59;UBERON:0001009,2.15e-08,112;UBERON:0010371,2.66e-07,104;UBERON:0000956,2.97e-07,25;UBERON:0000203,2.97e-07,25;UBERON:0003914,3.20e-07,117;UBERON:0001638,3.46e-07,9;UBERON:0003920,3.46e-07,9;UBERON:0004582,3.46e-07,9;UBERON:0001473,3.71e-07,8;UBERON:0004536,3.71e-07,8;UBERON:0006558,3.71e-07,8;UBERON:0004535,6.72e-07,109;UBERON:0000922,7.48e-07,592;UBERON:0003056,8.74e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.664601683750863,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,7.85874452986276,0,0,0,0,0,0,0,0,4.57153536943422,2.58070378531837,5.9013885273291,3.39184765154406,4.19499436209906,10.4544855937226,3.9709043641994,16.538672586837,13.519117982095,23.4304428935269,28.6008815147494,12.9246257972147,34.9008742293882,7.72092468726324,16.2028389576352,8.75137337183982,9.6547630229253,5.63057402416611,7.66583187329416,2.84779697870439,6.96166626935548,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.538842688278752,1.30769522490767,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,2.78312513475119,1.85910308591229,1.24393266018445,1.00928340350251,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3591300026134,8.41450642820675,0.4115740113314,0,0,0,5.31710916013264,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,16.7465079402846,16.667478452758,14.4593155698295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0,0,0,0,21.6093429734704,14.4579649485038,6.0456456508599,37.0145406456694,0,0,0,0,0,0,0,0,0.328014645699706,0,6.80070676874967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.11934705049064,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,12.7462115966548,0,0,0,0,0,0,1.9882952955326,2.2507106625682,0,0,0,3.18796781201712,2.48655523978033,0,0,0,0,0,0,0,2.26879832964947,0,0,4.84666373047609,0.556608588971108,0,0,0,10.1499940560871,0,0,0,0,0,0,0,2.29133233388275,0,1.10579259931225,0.591095237907095,1.09692698576986,0,0,7.07942378234933,0,0.23056390438806,2.78248697670294,2.17294743844016,0.957003479195758,0,1.5991043280559,0,0,0.997270091400938,0,0,0,0,0,0,0,0,0,0.995261931078505,3.00755719311353,1.83309043480088,0,0,0,3.03305098413047,4.01288823649394,1.87411556580271,0.182454789215666,0,0,1.97292201424695,1.20990716048664,0.91821828489147,5.56041900730694,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,2.79562669187248,0,0,0,0,3.20063754411784,0,2.48578814858586,0,0,2.46912104227927,0,0,5.33632486848381,0,0,0,0.514784993585894,0,0,0,0,0,0,0,3.00210144354895,3.9702559878678,0,0,0,10.3334488470734,15.8120692568062,12.2038414178058,6.38972801596772,11.5891032996874,5.57928643604681,9.06976878570805,0,10.4846354574708,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,2.17925449778521,5.30485389934563,4.12618309791701,2.49264202817511,0,0,4.1917194094037,0,3.94028536495991,6.24209598806477,0,0,0,4.2881719582402,5.95882773328889,0,0,0,0,0,0,0,0,1.46552233678082,0,2.32709321450791,3.30581504356725,0,0,8.43620559284788,13.5195702385713,11.1844544943743,1.9846640872478,0.592834895693833,0.243585196761792,0,1.08803560673895,4.2617281983859,1.22538230705385,2.62298104567844,0,0,0.488105059607853,3.004582336956,1.14681839138014,1.55300672151593,3.97416978824854,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46837815520881,0,3.19267718114303,1.23069818544453,0.252071696221718,2.28218933131919,2.26065903884592,0,0,0,0,0,0,0,0,2.70757182057326,0,1.56302802246618,0.261906694481422,0,0.295712172434091,3.17426647706455,0.781078098613847,1.2401207790071,2.09272173639893,2.18789923607288,2.19303106742873,7.93937885422871,0,0.638812138197976,0,1.00885116665647,0.606965604236632,1.59363533945908,7.00748724284847,0.115233987555779,0,4.35006291051723,3.485956998831,0,0,4.78807866388135,0.314231179832004,0,2.73947616152849,0,0,5.0748346365426,0,0,0.173858272302579,0,0,0,0,3.44181887056222,0,0,2.54032230114557,0,0,0,0,0.196300467230486,0,8.41657488344263,5.33846595652485,2.3196288626764,5.82853191670967,0,0,0,0,0,1.50962843566674,2.16087642702245,1.5299169235277,0,2.94177986104687,0,1.96308467114945,0.891139200981258,2.5359343655004,0,3.66537280121429,13.3427828105305,0,0,0,0,5.84269110597214,3.21110498383179,2.00675416412032,0,3.12760854878208,0,6.34832208618481,0,0,0,2.27099564703142,0.218531143927391,1.64708051314868,0.305966489225945,0.534434810531121,0.275684698604535,0.250707539292375,3.63737751447549,1.07185652062471,0.829169439458779,1.55149493792843,6.6102534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| |||
|short_description=p1@USHBP1 | |||
}} |
Latest revision as of 11:19, 16 September 2015
Short description: | p1@USHBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USHBP1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000252597, NM_031941, uc002nfs.1, uc002nft.1, uc010eam.1, uc010xpk.1_5end |
EntrezGene: | USHBP1 |
HGNC: | 24058 |
UniProt: | Q8N6Y0Q8N8Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.53e-31 | 24 |
endothelial cell | 6.65e-31 | 36 |
blood vessel endothelial cell | 9.44e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.44e-23 | 18 |
meso-epithelial cell | 1.82e-22 | 45 |
lining cell | 4.68e-15 | 58 |
barrier cell | 4.68e-15 | 58 |
endothelial cell of artery | 1.40e-11 | 9 |
lymphangioblast | 5.25e-10 | 6 |
endothelial cell of lymphatic vessel | 5.25e-10 | 6 |
vascular lymphangioblast | 5.25e-10 | 6 |
vein endothelial cell | 1.31e-08 | 6 |
aortic endothelial cell | 3.10e-08 | 6 |