FFCP PHASE1:Hg19::chr19:14640392..14640420,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4551 | |||
|TSSclassifier=strong | |||
|UniProt=B3KSQ1 | |||
|association_with_transcript=0bp_to_ENST00000436007_5end | |||
|cluster_id=chr19:14640392..14640420,+ | |||
|description=CAGE_peak_1_at_TECR_5end | |||
|id=chr19:14640392..14640420,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-09!254;CL:0000333!4.48e-08!41;CL:1000449!7.23e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.22e-07;15!CL:1000497;2.29e-07;17!CL:0002518;2.29e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.81e-10,253;CL:0000333,4.48e-08,41;CL:1000449,1.23e-07,15;CL:1000497,2.35e-07,17;CL:0002518,2.35e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.57e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.57e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000064!8.96e-09!219;UBERON:0001737!3.34e-07!9;UBERON:0000063!6.11e-07!97;UBERON:0004211!7.23e-07!16;UBERON:0001285!7.23e-07!16;UBERON:0007684!7.23e-07!16;UBERON:0003220!7.23e-07!16;UBERON:0004208!7.23e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15!UBERON:0001737;3.37e-07;9!UBERON:0001557;3.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.23e-07,15;UBERON:0009773,1.23e-07,15;UBERON:0001231,1.23e-07,15;UBERON:0001285,1.23e-07,15;UBERON:0007684,1.23e-07,15;UBERON:0004208,1.23e-07,15;UBERON:0004121,2.14e-07,171;UBERON:0000924,2.14e-07,171;UBERON:0006601,2.14e-07,171;UBERON:0001737,3.34e-07,9;UBERON:0006555,8.29e-07,16;UBERON:0004819,8.29e-07,16 | |||
|phase1_expression=116.455841112427,118.611690235605,138.981042438628,116.085026089631,140.792744744596,153.531580241665,230.502889133163,178.145004306366,252.305316841044,267.358522913642,634.999062854909,283.973783769224,175.932574478379,200.377725442315,128.913579158159,108.244348578736,115.11465485258,134.377056631277,128.814258880694,260.27791677433,198.288671889414,224.747035299789,133.672205990203,136.326927372593,153.162020305659,92.7658745780128,95.2366837619371,98.9394521112948,41.6966133459838,24.1812520801244,62.8553460663269,225.258199997337,291.266123458568,157.145454320885,135.722535416688,127.099293843755,161.480241634166,42.1036510484227,49.9355674200653,42.1001089188753,165.473535463304,133.44419039982,148.363526957291,25.8808865027625,24.1840603960838,30.323007648477,29.5184876870219,34.1269347058115,25.3959224133985,41.1400121020675,39.4487488054815,29.7967609659617,38.2667705617647,27.7558413941045,32.502356782642,29.3658049686463,33.0216441569993,18.2026022400519,36.7300670845083,33.3766188159137,35.1635419189473,34.3045352194185,36.1029220295154,30.688182038354,39.4684564534874,36.3126543802329,34.8780459437522,36.179807796971,37.0252872078343,35.401781686934,43.5887641896025,36.0912083267813,29.7474644194431,61.4752883167751,71.0098361883245,71.0742808273394,69.9807372042664,64.8764177075307,47.8962248357299,47.3121154610473,47.9389192049807,52.6072762842146,73.9184226737555,72.0902966866013,91.6194531479461,84.0658538456019,81.6807813553465,83.3391037934001,103.123000154438,92.5432141899303,59.1981487873826,49.3279239071589,58.48780390316,56.8336712889811,46.5222107274675,160.400907628022,74.5530028731427,76.244087973338,88.408644569789,131.575771872464,161.983366516894,154.817432475258,208.464599396465,175.471469594148,157.319554591563,164.156615886463,120.507719375432,147.689291643703,131.359941035477,125.137245403398,122.423057879131,146.930164467672,161.92892697297,152.765812839226,152.621864755266,153.307540669807,125.69632190143,145.01078199367,122.20851124542,121.691988271805,123.70585623272,111.20288920046,112.178463712941,114.42003037205,127.429341083393,132.121706640561,116.600175562789,56.6514948461498,47.0694744578973,61.6951960540724,80.4562658836074,234.745300896273,139.881642656822,70.4806347149904,113.302367803711,100.23379112089,128.041037475227,107.546306336883,142.180365014758,122.394627399335,109.354308187942,220.699742213646,451.726157482752,275.863625431615,89.2505332550379,99.7763394724801,108.892569664951,76.7939810263201,69.2113842043955,57.204455204753,116.077245902156,110.97026276869,133.301952617316,85.9268071724495,128.366827480231,157.092401947779,141.071602412347,82.4349461750159,80.0474091045098,74.6426966465215,126.891234889381,110.239455329184,110.560112069321,108.460608702031,131.242995556845,115.196649486463,112.264686313085,128.039253309537,183.97996495906,235.417883572896,122.745168433373,19.7670626154095,15.511210565933,342.333830931889,62.6184659136101,83.4495071869581,54.0229457717933,197.630431695933,99.30714701554,126.152460032019,167.595923295637,149.233866792382,98.3426871863262,72.7437629176316,87.6155800688139,248.074823910043,152.11044406272,250.020967766661,116.43570865771,159.732110032446,98.3372318030851,130.117424497291,116.710392889423,130.619250233091,147.807619988543,193.095546814099,150.339011610739,117.612282870923,90.7469630452304,479.65503774134,462.071465187841,174.227877942459,174.415216701518,117.752249080778,156.715010654459,109.722630896049,100.359023349607,101.408371745059,228.901175138988,98.8770710229967,80.1102586383144,279.684901550663,98.9304280689013,131.396675423271,134.376370271408,184.303754807463,80.4829662631501,136.566671866066,82.0164596902887,85.6724101139703,302.468172824155,97.4272789861281,155.826184333338,126.199337115633,120.553785301149,123.612780612661,234.311489474953,193.758521286011,201.480296935745,173.217622930684,229.611974296822,157.670219120759,259.706223667494,263.08554372089,290.083334840209,111.448302727675,167.476039747344,353.500718519054,380.495645506276,377.423272797533,364.080403989632,356.232891091084,371.091248289755,400.448985235688,398.329574204453,428.993079995225,180.848086383039,301.519813677409,230.893020356915,279.31655163253,181.259699795218,199.513924985558,166.602753684156,162.458420584591,203.299888911767,180.146200813452,167.478935533563,284.376435741777,172.206129741124,181.288175620401,115.661948385165,311.980435583874,167.424356749317,215.050901228768,121.048363757132,104.81004107454,150.007306074822,79.3359814818275,402.214038561271,428.384594885341,157.332666889847,153.974806461618,153.535990644256,105.919232405058,86.8467602788104,108.74149958491,82.662516454729,115.381673590043,292.520984203056,152.232940509847,145.896255159916,98.273526766326,111.692963898145,105.917401644733,206.431654343842,394.212055176143,595.464631827039,342.14489204541,197.531613483084,270.008409001682,274.679201757986,236.484456884366,212.312553521807,195.593208284474,101.349025154098,1405.5898321979,192.729027582768,126.852481610983,185.133237702232,308.391641740308,163.12650182677,242.44418290465,160.850242865416,297.899261359902,274.962272484777,112.053247397045,130.428845188514,204.323583216825,94.9534037737696,129.858485331444,112.569588070996,291.897073538857,242.590175161717,238.242351615826,89.3800710983603,127.496748775866,139.784166939904,74.5623729338033,109.313403596804,110.659675282255,141.451451719831,50.2428438514914,41.6161219478868,42.2248589360372,153.219058406145,130.139853857622,113.673455478321,141.38372794219,81.0182214599517,19.4741826226267,11.966458368161,14.0901274568252,152.505524206891,298.601801072627,109.591069574693,51.5767736596402,52.993409672757,63.8694780887435,86.3332228496296,100.816943408786,191.022303407027,160.383260503383,133.509345305623,128.136572136484,119.20431905021,501.250963104616,270.740161386765,75.263561508731,52.8499792005611,61.0481630635702,280.696131159236,416.088598776243,361.356400528968,103.709063668249,97.7552769844958,94.0211316350796,128.395427554212,103.364864311474,124.179227122865,182.554221727339,142.027127992246,132.638608808906,124.258387048893,158.372600901004,103.543447207824,200.505826872501,74.7889134231253,77.8084356508324,105.629292311438,123.093629572541,92.442712546394,337.497310454744,182.911425622985,833.763804634997,355.118315907423,178.171149571174,261.586783363062,157.506771086054,131.060961073999,516.661296512469,322.968153552273,353.189600793817,304.067393742731,340.741163660777,253.202347590784,95.5973062176275,122.874661981703,243.114718610337,229.282237344094,179.93425224936,161.774388286924,217.294340013929,206.851316300914,160.220085100932,156.014459048765,73.9146077283134,132.245542623623,140.64638742567,139.841847675504,119.504308344088,166.393959300956,164.448930898735,137.214870139922,122.419049014264,56.3621561380935,65.9211931062314,66.8690613471621,71.3162355031627,60.4299214086472,192.03553156669,158.227460326456,107.811753061631,127.221141245768,143.538943692387,125.835144771562,31.0581004230121,125.045212104848,132.246599532427,120.668912753781,305.541962825733,100.137723199937,239.925248936156,156.204779399647,150.553246997234,152.36805150351,152.331436232973,115.24401449679,133.148669785327,105.735872515984,448.135406223334,64.0966477730278,161.644724537836,113.84092611426,120.053211728702,169.512174930364,221.097502761996,112.121186815766,99.9668018378579,251.188581871742,180.371056812824,91.1067592562541,115.564164791207,119.720631076203,158.899778242089,147.668308642721,94.5178286425313,207.180461417229,79.3764708719217,90.556095563973,331.659553871235,375.130020102622,142.601171059209,305.657837644319,292.916749276958,159.573742316641,223.001783043697,237.544780691352,251.868327208832,113.713083102445,66.9830844186464,73.405171885668,76.3327230813378,75.5194728201191,74.045209155515,79.7622172767042,52.9230808493352,95.9681463316067,162.158939971504,76.0359085658053,254.841824620273,110.924495550054,141.816636355845,107.139616082712,174.093489819874,176.228584975177,192.845907723293,118.960553490822,210.355017297912,251.032677233432,122.790257319857,251.314552819929,127.823583315934,175.047698246858,325.351440160095,189.086325638012,195.46342309986,284.765930802529,281.739780870856,335.066809622839,325.355826338222,156.896640607838,123.055528861697,105.855163095033,67.8843752974718,311.422290077962,74.7231126965602,177.596372847401,85.2677603362423,124.63725583675,211.519543358654,169.061007349816,87.1417369292569,114.628366801399,84.1620323751896,193.858791314428,134.057953839219,104.630182721532,159.530150251503,195.079877110266,57.5826686045592,79.5697676729705,220.441154372492,134.585586172836,69.9121695018875,42.3013839220058,163.650267439282,72.6825969182973,203.094230980068,73.2920503882417,35.922463852041,170.039594921294,176.41855978933,218.376103072998,89.8262091005374,92.712282946343,168.535419992669,63.074963062827,84.2071517312697,94.0738506083235,124.81269597347,267.176114262135,351.675163740205,163.554745227161,135.518432029517,141.700815384854,190.727170396354,217.61998354465,128.563214244793,140.187268781388,192.167449647499,163.125780805966,127.429628082288,101.408429703831,83.9252611972539,206.532339786886,185.56971124279,162.690591463279,132.8165104327,147.650632957162,182.926003770368,146.776539729348,175.353324404665,272.970749346789,265.468671466219,252.403666811667,167.74229972818,203.756694252845,131.240796136433,205.183639856049,235.635570080379,140.003449913133,103.507240832164,123.398302482158,79.4339188413713,107.340648582385,215.495509522701,232.025571801122,221.075716176621,39.3263047176407,180.383623208511,122.792073142143,92.3537001359463,88.8576189094779,200.054292244641,68.9647081477384,87.8428825879507,81.3843145614925,136.19301798953,186.638744515045,85.0756957065197,109.55833739479,123.061704015632,120.667154070688,95.3441979199806,144.637683952704,136.938633546418,146.792611326738,127.280560020549,95.5754875283905,141.716490756612,370.673505168485,407.472942755484,353.0964653288,123.467017989758,78.7244650088182,151.181115582176,99.4924372935412,142.478376591044,165.74766381249,160.156582459804,190.216880456889,100.749813516974,110.6945237085,176.078489762318,167.681576786901,140.193113253225,142.182085614304,92.6923915318127,148.722935843198,185.37333708441,226.151353727264,219.092171482819,238.095286078852,108.075651967762,122.393408729442,70.2606234368348,97.9865206437502,106.206491128843,67.027776305341,58.2067476989676,31.5864130813798,109.024734272449,92.7128263974993,55.3465214455844,107.762289868709,62.3318798528358,74.5574076975704,222.641273200214,216.506459967324,242.585354331211,97.935344107175,133.445171335676,139.165195716628,147.099678600502,171.68436256064,172.199374619737,184.040069746929,28.1217364439376,31.7258801368759,178.482197461276,149.603870669273,114.268275583837,177.296507896294,59.1361884508676,137.513389268292,138.946602859278,63.6078840472297,67.533380977274,153.323928205814,61.3589549981695,78.6441556993154,80.9936653071335,256.222609943723,139.557285273876,100.699320875184,149.118712440485,200.190351204261,113.95592446451,129.412239317912,123.505250027672,125.235565331329,374.256776850153,146.619117455445,112.401078146261,74.5630299624952,83.3558916644077,229.031881369717,160.40085206764,116.816450171943,77.2505280784653,82.727665027491,98.0305845643077,99.3454071050707,89.834943055134,155.061931494223,148.017859326081,141.966515421171,141.058662139758,166.726364459889,196.100440488889,166.710105098158,225.214695147716,117.224767859694,94.4890254033842,73.6382015655277,245.875825548613,142.167529067219,139.702495502114,110.780108867584,175.318652234826,151.333001214796,145.154679311236,223.34261662073,144.855763295253,128.999977970043,153.105642574039,114.144175791997,114.852969125029,156.981286145098,146.10244242056,172.103076253955,87.7277658041383,123.131834587569,125.915876339669,100.151770800393,82.1878881073416,123.475239598538,132.652037947473,160.555680917959,103.903026950339,170.811855511167,168.950686949934,167.701245405428,76.9727879194771,77.2405519933286,59.4003208108544,36.8001951670948,128.542259765458,117.844939430831,95.9367881665353,233.173671088097,242.409136021363,146.701029168155,77.3898459242959,118.256305460071,225.200273390546,180.90651212309,174.787752915986,127.317321638323,147.383492937745,41.5052457827897,66.1666904760548,53.1587531331494,78.626363723139,84.7916535200332,74.1705552988781,98.3937987606255,216.584211279106,159.471071165915,76.047137777956,258.668860103836,105.609028328181,95.1778207850448,117.151244114145,161.413742660833,224.57576497022,181.287999398743,360.51189362235,228.092889269106,162.72765847207,303.344190459471,75.0490267542068,150.625932952394,108.077051018538,101.570671782917,93.7111160700793,178.87839189364,167.20196006419,127.866721104778,123.685167637175,42.8521883576921,306.989043688663,155.178095452209,162.757139095436,274.126577773365,193.116437120251,155.547451546384,147.064173009381,117.847067499355,114.599747725977,247.451780312646,126.729403268498,124.452027390072,106.285905527701,135.405761046895,98.7544662585883,107.491374679792,201.464614916671,147.623760638017,146.127565126337,209.842915931638,38.8352114402936,194.6315072343,68.9733537961119,197.327536171494,141.688532252311,148.925110374164,136.531191220843,100.149324699044,96.0734447502476,177.848252176091,128.255428149582,113.353574238134,194.733284978623,244.806263200924,243.833893743626,172.742367138383,116.169777418761,155.858665196674,130.046283777598,62.0947929946457,152.013024217909,146.669768181324,172.973236907508,268.30711272217,159.483235605068,117.702050348846,81.7745592024858,110.860647827225,138.964840354475,122.352960141094,267.601417186213,83.1873965135874,107.368889996539,202.379009991264,140.442510417503,205.046420924115,234.107040049471,76.3972599178922,97.9539331480125,139.961777879645,20.7177227900126,45.8902746647424,61.4701648609246,60.2281631393333,170.775808327337,222.42696663041,83.0062233627429,113.397866367116,351.699713068628,86.3507465201373,138.681962119977,123.049032563728,257.733878406115,43.6364012721952,86.9646458805,95.6022234849784,105.451472116116,107.354554806184,58.2850003379212,118.043800982696,107.902504467768,74.2562788522222,101.95429894383,79.7542410077463,146.280011474354,52.5842199537492,145.417182839239,153.230014388901,154.142816262741,285.836224762605,46.25317317608,129.611575926273,171.861698393039,155.753186848788,133.681607696251,179.156323265812,152.097676173464,121.503862469968,117.797098351989,148.572877327652,62.1209520855552,138.390561689391,341.76192896426,384.26056264396,145.104651905286,149.150380032853,82.0950830318776,71.4193294391221,127.950630385128,110.430916732331,120.990279724482,167.646614904686,73.77277396975,80.9906302176696,49.6238286573657,138.206412785934,135.483245986766,91.1489376936077,226.626699812953,171.831026863122,86.882527029123,74.8243933547869,68.0458732970017,97.915396790476,74.0551044534644,98.5320025794559,98.4228850660118,66.9988148913757 | |||
|short_description=p1@TECR | |||
}} |
Latest revision as of 05:20, 16 September 2015
Short description: | p1@TECR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TECR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436007_5end |
EntrezGene: | TECR |
HGNC: | 4551 |
UniProt: | B3KSQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.81e-10 | 253 |
migratory neural crest cell | 4.48e-08 | 41 |
epithelial cell of nephron | 1.23e-07 | 15 |
kidney cell | 2.35e-07 | 17 |
kidney epithelial cell | 2.35e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.23e-07 | 15 |
renal tubule | 1.23e-07 | 15 |
nephron tubule | 1.23e-07 | 15 |
nephron | 1.23e-07 | 15 |
uriniferous tubule | 1.23e-07 | 15 |
nephrogenic mesenchyme | 1.23e-07 | 15 |
ectoderm-derived structure | 2.14e-07 | 171 |
ectoderm | 2.14e-07 | 171 |
presumptive ectoderm | 2.14e-07 | 171 |
larynx | 3.34e-07 | 9 |
excretory tube | 8.29e-07 | 16 |
kidney epithelium | 8.29e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.57e-07 | 235 |