FFCP PHASE1:Hg19::chr19:11257137..11257140,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:11257137..11257140,- | |||
|coexpression_cluster_id=C3746 | |||
|description=CAGE_peak_at_chr19:11257137..11257140,- | |||
|id=chr19:11257137..11257140,- | |||
|ontology_enrichment_celltype=CL:0000548!6.15e-19!679;CL:0000004!6.15e-19!679;CL:0000255!6.15e-19!679;CL:0000012!1.09e-18!682;CL:0000066!1.03e-15!254;CL:0002321!3.27e-13!248;CL:0000220!5.23e-13!246;CL:0000003!3.64e-11!722;CL:0000055!1.98e-10!180;CL:0000144!6.24e-09!625;CL:0000333!8.62e-08!41;CL:0000222!9.67e-08!119;CL:0000133!4.59e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.22e-14,253;CL:0002321,1.41e-11,250;CL:0000333,5.59e-08,41;CL:0000222,3.28e-07,121;CL:0000133,3.47e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.01e-31!235;DOID:14566!2.26e-30!239;DOID:0050686!2.12e-17!137;DOID:2531!1.03e-16!51;DOID:0060083!1.03e-16!51;DOID:1240!2.76e-13!39;DOID:0050687!7.02e-13!143;DOID:8692!4.34e-10!31;DOID:305!1.78e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.98e-11;51!DOID:0060083;2.98e-11;51!DOID:1240;3.71e-11;39!DOID:8692;2.46e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.33e-30,235;DOID:14566,1.97e-29,239;DOID:2531,1.72e-17,51;DOID:0060083,1.72e-17,51;DOID:0050686,6.15e-17,137;DOID:1240,6.33e-14,39;DOID:0050687,9.61e-12,143;DOID:8692,1.37e-10,31;DOID:305,5.46e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,2.78330681058278,0,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,8.84642171405432,27.2142455509247,9.82986174585775,5.01157258634062,2.72285976512103,2.31978163009541,0,0.602694528023977,0.730310090387373,1.95173119516203,11.0808952269109,16.5240559907845,6.89600387251793,16.8879232407323,19.5730427854224,14.3118609138075,5.11969818511273,5.41863890369642,6.69041641166274,0.786728553697808,0.383829398097213,0.154816123316076,9.19421224478927,5.72291245678675,1.84877005083394,9.76086727311801,10.9470309015315,5.87200878669694,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,12.3790519844286,0,0,0,0.501559486172034,0,0,0,2.33961959458865,0.294605907474837,0.221533894583621,0.270803863765016,7.81357050326618,5.9827299877544,15.1282872235382,8.0141505157896,3.47763702882063,0.444859689486181,0.535081656179426,0,5.66546713487831,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0.821127996921047,0,0.534880391567015,0,0,6.03630773733273,3.70801429346238,13.0118094858444,1.00267582127178,2.75208386025565,0,1.94653948121054,11.9113869626725,3.76939975686359,5.88493064143945,0.654895377488563,6.9216104775583,14.0898088258083,0,0,0,0,0,0,12.5220316641024,3.4409383804245,7.28995053375948,3.39184765154406,4.61449379830897,14.3061381808835,7.31482382878837,3.35941786920128,1.77883131343355,1.00416183829401,8.86224497640123,4.56163263431108,5.85748938115607,5.51494620518803,4.86085168729056,14.4665559820209,5.16417557040191,3.82879033643296,1.53316637465883,2.84779697870439,8.06087673293792,0,0,1.3082821564276,0.496971951695318,6.45815609489357,0,3.44203944898576,6.38403087957043,3.36406560085384,1.06748995729705,2.71334303258876,2.8008993185979,2.96363478553314,6.86539993076527,2.57307626996383,0,3.98346434117454,2.49728061464256,7.41613368007784,2.09228152772521,5.63685593490071,8.57926605151097,9.83155646915739,2.24569588380383,27.7605557124596,0.723280468230358,3.56400857184616,2.22540236350701,0.910161361938026,3.59309070908119,13.9718974581875,11.8862593878366,1.6623846929051,9.2185300384976,8.27517048657353,1.20190447125277,18.2625814887634,5.202299434977,0.213557388818567,1.90738711043606,3.60109315301283,2.16410311400722,1.03056216018252,1.30281799432113,9.11392194102838,5.35903528386592,3.02920529092937,0.736399189138395,1.61646056818812,2.13005755509969,8.06016785821122,11.0214385001817,0.193260853163297,2.18196896472668,1.43402297694502,5.2448693635726,4.63854189125198,7.43641234364918,3.62813692553797,12.1114008420302,5.10968302706162,4.69348596989448,3.21620469096443,6.90674606762403,0.464367928031979,0.721879481669586,6.27026040211173,5.05754070234305,4.57920956778616,7.94116603673236,7.40790109914181,3.79632990577755,9.43819157121151,5.101758093259,6.15595451114225,3.69077727312324,8.41450642820675,4.115740113314,2.94017422771084,0,0.982827216677626,0.590789906681404,16.3341346783421,3.81264159483652,3.94605963686609,0.548751427043128,1.1240175325762,3.61904300681871,3.24059558054854,2.93227474779292,7.27954349695705,7.21656710126366,3.82570336417754,0.117408694235822,5.34155856715973,7.40776820122577,5.13686211033415,25.2865407346968,10.3018339451385,1.47730203652438,1.8720341211139,4.01304138179566,1.87467667973554,0.335964256397719,0.567100388969546,11.3739323832617,7.84711633987697,13.4183937707824,0.492663237895943,3.16974362447614,0,0.144119953416961,0,16.1919630445031,2.67391897890794,4.68869788840188,6.84289784090821,7.50640696734262,9.01029173531752,2.28661146104463,6.95212722941236,3.05172048183296,20.0946903149403,0,7.15312891703765,13.524844040896,0.26593811658487,1.04007436911366,18.2617235726121,18.4403871630262,16.5181750989982,2.57360388584666,1.62786481617433,12.3486050517115,20.847115794799,2.48774364119782,26.9263636797366,0.602878754119172,0,1.49959486773086,0,1.50677127429638,2.10833939483032,1.67737398844108,0,1.42636905040718,3.4747513600219,1.43833425785268,4.29746311775749,13.2260469912362,0,0,0,1.77866236955724,0,3.09315525111078,4.18790663335872,7.65526501983796,0,2.99161459204025,0,0.24538298343828,3.50119364741774,1.62759014219841,0.623912584592421,3.21172179834891,2.99634588564476,2.45996971484698,0.300946099727719,2.27407504055985,0,10.627609576567,2.94990669666725,6.16873662723388,2.34961388955289,3.43143423810856,0,0.215714200818617,0.106727557803444,4.54691357169389,1.66435439510497,7.55975733324201,0.248107807818777,1.53461973288062,0.561320188866147,0.128139149255701,1.53512174720011,0.64341568457443,0,17.5799050935027,6.5697838365857,11.4978018419333,9.34657972530518,19.5233435812732,3.2632051389738,0.40101294060657,0.0920809889358963,8.95552695683933,22.5793048328329,1.70461739447251,4.96319574198153,5.46808893441345,19.6087442294214,5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| |||
|short_description=p@chr19:11257137..11257140,- | |||
}} |
Latest revision as of 03:23, 26 July 2015
Short description: | p@chr19:11257137..11257140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11257137..11257140, - |
Coexpression cluster: | C3746_acute_Reticulocytes_Renal_Alveolar_Hodgkin_mesenchymal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.22e-14 | 253 |
embryonic cell | 1.41e-11 | 250 |
migratory neural crest cell | 5.59e-08 | 41 |
mesodermal cell | 3.28e-07 | 121 |
neurectodermal cell | 3.47e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.33e-30 | 235 |
disease of cellular proliferation | 1.97e-29 | 239 |
hematologic cancer | 1.72e-17 | 51 |
immune system cancer | 1.72e-17 | 51 |
organ system cancer | 6.15e-17 | 137 |
leukemia | 6.33e-14 | 39 |
cell type cancer | 9.61e-12 | 143 |
myeloid leukemia | 1.37e-10 | 31 |
carcinoma | 5.46e-09 | 106 |