FFCP PHASE1:Hg19::chr18:56246555..56246574,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=0bp_to_AL832018_5end | |||
|cluster_id=chr18:56246555..56246574,- | |||
|description=CAGE_peak_16_at_ALPK2_5end | |||
|id=chr18:56246555..56246574,- | |||
|ontology_enrichment_celltype=CL:0000057!8.38e-21!75;CL:0000055!3.52e-18!180;CL:0002620!1.77e-12!23;CL:0002334!8.00e-07!12;CL:0002556!9.11e-07!6;CL:0000548!9.76e-07!679;CL:0000004!9.76e-07!679;CL:0000255!9.76e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.17e-20;23!CL:0002605;3.49e-11;3!CL:0002580;3.49e-11;3!CL:0000197;2.23e-10;6!CL:0000098;2.23e-10;6!CL:0002167;2.23e-10;6!CL:0000057;1.12e-08;73!CL:0000453;6.80e-08;5!CL:0002334;3.99e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.06e-20,23;CL:0000057,6.11e-20,76;CL:0002580,1.09e-11,3;CL:0002605,3.71e-11,3;CL:0000197,1.54e-10,6;CL:0000098,1.54e-10,6;CL:0002167,1.54e-10,6;CL:0000453,6.99e-08,5;CL:0002334,3.14e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.12e-12;5!DOID:450;3.12e-12;5!DOID:66;3.12e-12;5!DOID:423;3.12e-12;5!DOID:0080000;3.12e-12;5!DOID:11722;3.12e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.92e-12,5;DOID:450,3.92e-12,5;DOID:66,3.92e-12,5;DOID:423,3.92e-12,5;DOID:0080000,3.92e-12,5;DOID:11722,3.92e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.41e-09!365;UBERON:0003102!6.79e-08!95;UBERON:0002100!8.68e-08!216;UBERON:0002097!2.13e-07!40;UBERON:0002199!3.99e-07!45;UBERON:0002416!3.99e-07!45;UBERON:0001758!9.11e-07!6;UBERON:0003672!9.11e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.03e-13;41!UBERON:0002199;1.56e-11;46!UBERON:0002416;1.56e-11;46!UBERON:0003102;7.34e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.44e-17,41;UBERON:0002199,1.39e-14,46;UBERON:0002416,1.39e-14,46;UBERON:0003102,2.13e-11,99 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,1.14494394852423,1.23186982565596,1.75759695432724,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,1.00267582127178,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,2.25095607382472,0,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.352303495931295,0,0.140450806702248,0.816616685019573,0.245668634623536,0.619954687054593,5.94001428641027,1.97813543422845,0,0,0.673344455816265,0.250237039743928,1.6623846929051,0.877955241761676,2.75839016219118,0.751190294532984,0,2.15267562826634,4.91181994282705,1.27159140695737,0.600182192168805,1.23663035086127,2.83404594050192,2.04728541964749,1.68776332241266,1.46155507741798,1.26216887122057,2.66944706062668,0,2.4850671476163,0.604512589365842,1.18692414617341,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,1.44375896333917,1.18306800039844,0.168584690078102,0,0.441175890929576,0.217879444092406,0,0.539325232640658,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.80672114403045,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.66376689224646,2.67643483195743,2.52323864054295,2.22568688486155,0,0,0,0,0.368738337083406,1.12948698808508,0,0,0,0,0,0.303127571446259,0,0.604780586659361,1.73675465473144,1.84154367945675,1.40330047216537,1.28139149255701,1.02341449813341,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0.918515585316854,0.546273504020151,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.623224249527161,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,2.232950216158,1.2655176988749,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,1.9109987597118,0.707027159768564,0,0,0,0,0,0,0.405820753925408,0,0.563391205064483,0,0.196498082026242,0.7133421029625,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0.71623345421307,0,0.614321404198464,0,0,0,0,0,0,0,0,0.920418142519393,0,2.17727711363265,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,1.04206466326994,0,0.19980960958213,0,0,0,0,0.248505071130865,0,0.543616824294456,0.732219924186332,1.52997326454483,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.788057072991982,0.0524545881349981,0.316801009558219,0.35857467866569,0,0,0,0,0,0,0,0,0,1.19271615249795,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0.464033759878494,0.796191777397232,1.20008329398946,1.03018711554838,0,1.26184898228651,0.192619830407303,0,0.260994291965212,0.453411851024545,0,0,0.537266523244462,0,0.657852148736121,0,0,0,0,0,0,0,4.48178710330594,7.97189041880179,5.23409261618701,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0.558644917973244,0.954013051960256,0,0,2.1160556621441,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.381382095467167,0,0.795664888465099,0,1.21023041222112,0,0.261906694481422,0.655087670040387,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0.9555033757741,0,0,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56657017140618,1.1598144313382,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@ALPK2 | |||
}} |
Latest revision as of 00:05, 20 September 2015
Short description: | p16@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.06e-20 | 23 |
fibroblast | 6.11e-20 | 76 |
preadipocyte of the breast | 1.09e-11 | 3 |
astrocyte of the cerebral cortex | 3.71e-11 | 3 |
receptor cell | 1.54e-10 | 6 |
sensory epithelial cell | 1.54e-10 | 6 |
olfactory epithelial cell | 1.54e-10 | 6 |
Langerhans cell | 6.99e-08 | 5 |
preadipocyte | 3.14e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.44e-17 | 41 |
integument | 1.39e-14 | 46 |
integumental system | 1.39e-14 | 46 |
surface structure | 2.13e-11 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.92e-12 | 5 |
myotonic disease | 3.92e-12 | 5 |
muscle tissue disease | 3.92e-12 | 5 |
myopathy | 3.92e-12 | 5 |
muscular disease | 3.92e-12 | 5 |
myotonic dystrophy | 3.92e-12 | 5 |