FFCP PHASE1:Hg19::chr18:53254750..53254764,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=strong | |||
|UniProt=P15884 | |||
|association_with_transcript=-382bp_to_BC125084,BC125085_5end | |||
|cluster_id=chr18:53254750..53254764,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_58_at_TCF4_5end | |||
|id=chr18:53254750..53254764,- | |||
|ontology_enrichment_celltype=CL:0000784!8.98e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.43e-60;3!CL:0000817;5.71e-21;1!CL:0000451;4.59e-17;10!CL:0002253;3.52e-11;2!CL:0000945;5.04e-08;24!CL:0000236;5.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.43e-60,3;CL:0000451,4.59e-17,10;CL:0002253,3.02e-11,2;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000817,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-09!115;UBERON:0000073!1.49e-09!94;UBERON:0001016!1.49e-09!94;UBERON:0005743!1.32e-07!86;UBERON:0001017!1.56e-07!82;UBERON:0001049!4.74e-07!57;UBERON:0005068!4.74e-07!57;UBERON:0006241!4.74e-07!57;UBERON:0007135!4.74e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.71e-21;1!UBERON:0006518;5.71e-21;1!UBERON:0008949;5.71e-21;1!UBERON:0000101;5.71e-21;1!UBERON:0002167;5.71e-21;1!UBERON:0001875;3.52e-11;2!UBERON:0006514;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.45e-21,1;UBERON:0006518,3.45e-21,1;UBERON:0008949,3.45e-21,1;UBERON:0000101,3.45e-21,1;UBERON:0002167,3.45e-21,1;UBERON:0001875,4.09e-11,2;UBERON:0006514,4.09e-11,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,0,0,0,0,0,0.382273228125229,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,2.14641561874808,2.28797964312051,2.97166001063652,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,1.15415370381156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,1.65695622138878,0,0,1.21792598380896,0,0.544017803369474,0,0.306345576763462,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.471797825567689,0.218419276384028,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,10.3910395475843,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p58@TCF4 | |||
}} |
Latest revision as of 21:21, 19 September 2015
Short description: | p58@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_58_at_TCF4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -382bp_to_BC125084, BC125085_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | P15884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.43e-60 | 3 |
dendritic cell | 4.59e-17 | 10 |
epithelial cell of large intestine | 3.02e-11 | 2 |
lymphocyte of B lineage | 5.36e-08 | 24 |
pro-B cell | 5.36e-08 | 24 |
precursor B cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.45e-21 | 1 |
right lung lobe | 3.45e-21 | 1 |
lower lobe of lung | 3.45e-21 | 1 |
lobe of lung | 3.45e-21 | 1 |
right lung | 3.45e-21 | 1 |
globus pallidus | 4.09e-11 | 2 |
pallidum | 4.09e-11 | 2 |