FFCP PHASE1:Hg19::chr18:53068940..53068951,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |||
|association_with_transcript=-19bp_to_ENST00000537856,uc010xdu.1_5end | |||
|cluster_id=chr18:53068940..53068951,- | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_21_at_TCF4_5end | |||
|id=chr18:53068940..53068951,- | |||
|ontology_enrichment_celltype=CL:0002139!1.61e-19!24;CL:0000071!2.26e-14!18;CL:0002546!2.26e-14!18;CL:0000115!2.79e-11!35;CL:0002078!1.06e-10!44;CL:0000222!9.54e-10!119;CL:1000413!6.55e-09!9;CL:0000213!6.79e-09!57;CL:0000215!6.79e-09!57;CL:0005020!9.80e-07!6;CL:0002138!9.80e-07!6;CL:0005022!9.80e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.81e-42;24!CL:0000071;1.84e-30;18!CL:0000115;7.18e-26;36!CL:0002078;2.44e-18;45!CL:1000413;1.47e-17;9!CL:0002138;4.83e-13;6!CL:0002544;1.10e-12;6!CL:0000213;7.66e-12;58!CL:0000215;7.66e-12;58!CL:0002543;2.28e-09;6!CL:0002618;1.35e-07;3!CL:0002144;6.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.26e-42,24;CL:0000071,9.77e-31,18;CL:0002546,9.77e-31,18;CL:0000115,1.55e-30,36;CL:0002078,5.42e-27,45;CL:0000213,3.67e-19,58;CL:0000215,3.67e-19,58;CL:1000413,8.41e-18,9;CL:0005020,5.20e-13,6;CL:0002138,5.20e-13,6;CL:0005022,5.20e-13,6;CL:0002544,6.12e-13,6;CL:0002543,2.01e-09,6;CL:0000222,1.40e-08,121;CL:0002618,1.39e-07,3;CL:0002144,6.46e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.84e-30;18!CL:0005022;4.83e-13;6!UBERON:0004872;8.31e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-29!115;UBERON:0004111!1.10e-23!241;UBERON:0000025!1.74e-22!194;UBERON:0000477!6.26e-21!286;UBERON:0001049!5.03e-19!57;UBERON:0005068!5.03e-19!57;UBERON:0006241!5.03e-19!57;UBERON:0007135!5.03e-19!57;UBERON:0001017!8.01e-19!82;UBERON:0004872!6.20e-18!84;UBERON:0005743!8.30e-18!86;UBERON:0000119!1.66e-17!312;UBERON:0000483!2.47e-17!309;UBERON:0002616!5.52e-17!59;UBERON:0000073!2.86e-16!94;UBERON:0001016!2.86e-16!94;UBERON:0000955!3.87e-16!69;UBERON:0006238!3.87e-16!69;UBERON:0003080!1.64e-15!42;UBERON:0000055!1.93e-15!69;UBERON:0002346!4.72e-15!90;UBERON:0003075!7.89e-15!86;UBERON:0007284!7.89e-15!86;UBERON:0002780!8.77e-15!41;UBERON:0001890!8.77e-15!41;UBERON:0006240!8.77e-15!41;UBERON:0001986!2.26e-14!18;UBERON:0004638!2.26e-14!18;UBERON:0004852!2.26e-14!18;UBERON:0002049!3.15e-14!79;UBERON:0007798!3.15e-14!79;UBERON:0000468!6.07e-14!659;UBERON:0001009!1.10e-13!113;UBERON:0000475!3.48e-13!365;UBERON:0001893!3.94e-13!34;UBERON:0004535!5.06e-13!110;UBERON:0001981!5.57e-13!60;UBERON:0007500!5.57e-13!60;UBERON:0004537!5.57e-13!60;UBERON:0006965!5.57e-13!60;UBERON:0002020!1.37e-12!34;UBERON:0003528!1.37e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!2.45e-12!32;UBERON:0000487!5.03e-12!22;UBERON:0000956!5.92e-12!25;UBERON:0000203!5.92e-12!25;UBERON:0006914!6.53e-12!25;UBERON:0001950!1.20e-10!20;UBERON:0000467!1.82e-10!625;UBERON:0002619!1.95e-10!22;UBERON:0000480!2.43e-10!626;UBERON:0003056!1.42e-09!61;UBERON:0003914!3.49e-09!118;UBERON:0003915!6.55e-09!9;UBERON:0004700!6.55e-09!9;UBERON:0001917!6.55e-09!9;UBERON:0000481!6.99e-09!347;UBERON:0000924!2.06e-08!173;UBERON:0006601!2.06e-08!173;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0004121!4.00e-08!169;UBERON:0000033!7.49e-08!123;UBERON:0001637!1.45e-07!42;UBERON:0003509!1.45e-07!42;UBERON:0004572!1.45e-07!42;UBERON:0007100!6.92e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.84e-30;18!UBERON:0001986;1.84e-30;18!UBERON:0004852;1.84e-30;18!UBERON:0000487;3.15e-27;22!UBERON:0006914;6.52e-26;25!UBERON:0003915;1.47e-17;9!UBERON:0004700;1.47e-17;9!UBERON:0001917;1.47e-17;9!UBERON:0000490;4.66e-15;33!UBERON:0000055;5.74e-10;65!UBERON:0001473;1.60e-09;8!UBERON:0004536;1.60e-09;8!UBERON:0006558;1.60e-09;8!UBERON:0000956;4.87e-09;25!UBERON:0000203;4.87e-09;25!UBERON:0002619;5.72e-09;22!UBERON:0001872;6.07e-09;5!UBERON:0001893;1.46e-08;34!UBERON:0001869;1.78e-08;32!UBERON:0001950;2.04e-08;20!UBERON:0001638;3.39e-08;9!UBERON:0003920;3.39e-08;9!UBERON:0004582;3.39e-08;9!UBERON:0002465;2.04e-07;10!UBERON:0002791;3.32e-07;32!UBERON:0010523;6.21e-07;3!UBERON:0001915;6.21e-07;3!UBERON:0001982;6.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.77e-31,18;UBERON:0001986,9.77e-31,18;UBERON:0004852,9.77e-31,18;UBERON:0000487,1.83e-27,22;UBERON:0006914,3.21e-26,25;UBERON:0003915,8.41e-18,9;UBERON:0004700,8.41e-18,9;UBERON:0001917,8.41e-18,9;UBERON:0000055,8.02e-15,68;UBERON:0004111,2.28e-14,240;UBERON:0004872,1.59e-13,83;UBERON:0000025,1.39e-12,192;UBERON:0002049,6.34e-12,78;UBERON:0007798,6.34e-12,78;UBERON:0007023,2.10e-11,114;UBERON:0004535,2.25e-10,109;UBERON:0001009,7.21e-10,112;UBERON:0007500,9.53e-10,59;UBERON:0001981,9.53e-10,59;UBERON:0004537,9.53e-10,59;UBERON:0006965,9.53e-10,59;UBERON:0001473,1.68e-09,8;UBERON:0004536,1.68e-09,8;UBERON:0006558,1.68e-09,8;UBERON:0001893,4.44e-09,34;UBERON:0001872,6.19e-09,5;UBERON:0000956,8.44e-09,25;UBERON:0000203,8.44e-09,25;UBERON:0002619,8.82e-09,22;UBERON:0001869,1.26e-08,32;UBERON:0001950,2.92e-08,20;UBERON:0001638,4.81e-08,9;UBERON:0003920,4.81e-08,9;UBERON:0004582,4.81e-08,9;UBERON:0002780,5.84e-08,41;UBERON:0001890,5.84e-08,41;UBERON:0003080,5.84e-08,41;UBERON:0006240,5.84e-08,41;UBERON:0002465,2.12e-07,10;UBERON:0001049,2.17e-07,56;UBERON:0005068,2.17e-07,56;UBERON:0006241,2.17e-07,56;UBERON:0007135,2.17e-07,56;UBERON:0002791,2.19e-07,32;UBERON:0000483,2.81e-07,306;UBERON:0000119,4.47e-07,309;UBERON:0000073,4.59e-07,53;UBERON:0002616,4.59e-07,53;UBERON:0001017,6.33e-07,81;UBERON:0010523,6.46e-07,3;UBERON:0001915,6.46e-07,3;UBERON:0001982,6.46e-07,3;UBERON:0003528,8.64e-07,34;UBERON:0002020,8.64e-07,34;UBERON:0004457,8.84e-07,12;UBERON:0000042,8.84e-07,12 | |||
|phase1_expression=2.18014055124668,0.214100523890983,1.69145284915165,0,1.34088328328186,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0,1.14494394852423,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.15076305659177,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,5.36658499890104,2.58070378531837,4.16568601929113,2.82653970962005,5.03399323451887,1.92582629358047,1.04497483268405,8.0109195342492,7.82685777910763,10.7110596084694,2.01414658554573,5.32190474002959,1.46437234528902,3.30896772311282,1.62028389576352,7.9476758172831,3.14341121676638,3.37834441449967,0,3.79706263827252,2.74802615895611,0,0,0,0.496971951695318,0.759783069987479,0.529636723252875,0.573673241497627,0,0.560677600142307,2.1349799145941,0,0.933633106199299,0.942974704487816,0.980771418680752,0.302714855289863,0.576175924479999,0,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.453728732640084,0.358779271377724,1.06778694409284,0.423863802319124,0,0.515262646192195,1.28820270022815,0.744467425326359,1.18143432568886,0.779496041289589,0.757301322732344,0.736399189138395,0.80823028409406,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.587043471179108,3.03169540298255,1.38895653772983,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0.977208552881205,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,1.54657762555539,1.67516265334349,0,0,0,0,0.613457458595699,0,0,0,0.178428988797162,0.157702415033935,0,0.601892199455438,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,3.72161711728165,1.99500565274481,0.280660094433074,1.02511319404561,2.04682899626681,0.482561763430822,0,0.154209693802656,0,0.492762936082855,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,1.36074964221213,1.94324324491925,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,4.82051789532479,0.48335359146061,0.154048617114644,0.15350367472613,0.275673144969061,0.966782203814463,0.290033387828457,0.170453254832202,0.712256285173899,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.9266210955196,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0.78494864019923,0,1.09814811894422,0.471249609382746,0,0,0.842516912477962,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,1.65409603063837,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0.23874448473769,0,0,2.98244294329889,0.844016498463076,0,0,0,1.59398390600856,0.552567831062295,0,0.409074730008619,0,0,0,0,0,1.67693789582787,0,0,0.969332746095218,0.74214478529481,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,1.18219047581419,1.09692698576986,0,0,1.61595542857974,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,1.22206028986725,0,0,0,1.01101699471016,0.802577647298789,0.937057782901357,0,0,0,0.394584402849391,0,1.22429104652196,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.343972064943233,0,0,0,0.775912131907355,0,0.90392296312213,0,0,1.01297273529406,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.313808538937,0.305994652908965,0,0,0.136905378891993,0,1.71906176567983,0,0.837847203816763,0.687481272035051,1.43574604915363,0.399358000997982,0.429226048136571,0.223171457441873,1.34366944973453,1.08089965062721,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.971992906528395,0,0.315222829196793,0.367182116944987,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.646414781807753,0.39669780522807,0,0,1.70859860108311,1.41483874589699,1.24271716604159,0,0,0,0,0.544017803369474,2.2562090462043,0,0,0,0.886068179966986,1.46431517882356,0.751145584238999,1.72022758707021,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.151230923763239,0.932623203496683,0.443565449968902,0.159296767163702,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,0,0,1.03018711554838,0.673498977531838,0,0.192619830407303,0.214441591374926,0,0.906823702049089,0.926089897295336,0,0.71635536432595,0,0,0,0,0,0,0.345430341731199,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,1.10086159299127,0.109209638192014,0.509197589862076,0.212574920101683,0,0,0.954013051960256,0,0,0,0.6124909547064,1.09189682663981,0,0.957803154342908,1.23069818544453,2.01657356977374,0.899044282034833,0.484426936895553,0,0,0,0,0,0,0,0,1.50420656698514,0,0,0,0,0,1.35075169236789,1.56215619722769,1.2401207790071,1.26831620387814,1.64092442705466,0.548257766857182,1.48863353516788,0.175871244359621,0,0,0.336283722218824,0.606965604236632,1.13831095675649,1.1531308121143,0,0.342976018874837,0.40781839786099,1.11813715056843,0,0,0.78493092850514,0.785577949580009,0,5.47895232305697,0.215927591218621,0,0.78624198594322,0,0,0.521574816907738,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,1.43727929598746,5.799072156691,5.34282092365053,0,0.994753875806841,0,0.79062257427272,0,0,0.308696632431779,0.437119121007915,0,0.490296643507811,0,0.785233868459781,0.891139200981258,1.6906229103336,0.339854229375634,1.31577485171795,1.86927875123374,0,0,0,0,0.730336388246517,0.458729283404541,0.430018749454354,1.57771562193185,0.815897882290976,1.74540276136151,0,0.371995018166751,0,0,0,0,0,0,0,0,0,1.21245917149183,0,0.829169439458779,0.413731983447581,0.426467963801962,1.1903221573187,0.129177819672012,0.31037357147929,0,1.0820016907288,2.02117188958219,1.08858373948481,2.05339980651169,0.26940821205835,1.00411087549747,1.33064142618405,0,0,0,0,2.34640942403454,1.833621662743,2.03448089157869,0.665756774185513,1.00636896795513,0 | |||
|short_description=p21@TCF4 | |||
}} |
Latest revision as of 20:53, 19 September 2015
Short description: | p21@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TCF4_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | -19bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.26e-42 | 24 |
blood vessel endothelial cell | 9.77e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.77e-31 | 18 |
endothelial cell | 1.55e-30 | 36 |
meso-epithelial cell | 5.42e-27 | 45 |
lining cell | 3.67e-19 | 58 |
barrier cell | 3.67e-19 | 58 |
endothelial cell of artery | 8.41e-18 | 9 |
lymphangioblast | 5.20e-13 | 6 |
endothelial cell of lymphatic vessel | 5.20e-13 | 6 |
vascular lymphangioblast | 5.20e-13 | 6 |
aortic endothelial cell | 6.12e-13 | 6 |
vein endothelial cell | 2.01e-09 | 6 |
mesodermal cell | 1.40e-08 | 121 |
endothelial cell of umbilical vein | 1.39e-07 | 3 |
capillary endothelial cell | 6.46e-07 | 3 |