FFCP PHASE1:Hg19::chr18:34409080..34409111,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24561 | |||
|TSSclassifier=strong | |||
|UniProt=Q68CL5 | |||
|association_with_transcript=46bp_to_ENST00000334295,NM_015476,uc002kzv.1,uc002kzw.1,uc002kzx.1,uc002kzy.3,uc010xci.1_5end | |||
|cluster_id=chr18:34409080..34409111,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_TPGS2_5end | |||
|id=chr18:34409080..34409111,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.73e-19!86;UBERON:0000073!2.80e-19!94;UBERON:0001016!2.80e-19!94;UBERON:0001017!7.17e-19!82;UBERON:0001049!1.92e-15!57;UBERON:0005068!1.92e-15!57;UBERON:0006241!1.92e-15!57;UBERON:0007135!1.92e-15!57;UBERON:0000955!1.49e-14!69;UBERON:0006238!1.49e-14!69;UBERON:0001893!7.73e-14!34;UBERON:0003075!9.85e-14!86;UBERON:0007284!9.85e-14!86;UBERON:0002616!2.38e-13!59;UBERON:0002020!2.51e-13!34;UBERON:0003528!2.51e-13!34;UBERON:0002791!3.06e-13!33;UBERON:0001869!4.37e-13!32;UBERON:0003080!5.78e-13!42;UBERON:0002780!8.47e-13!41;UBERON:0001890!8.47e-13!41;UBERON:0006240!8.47e-13!41;UBERON:0003056!3.41e-12!61;UBERON:0002346!3.47e-12!90;UBERON:0004121!3.78e-10!169;UBERON:0000956!4.59e-10!25;UBERON:0000203!4.59e-10!25;UBERON:0000924!2.66e-09!173;UBERON:0006601!2.66e-09!173;UBERON:0000033!6.82e-09!123;UBERON:0000475!8.19e-09!365;UBERON:0000153!1.16e-08!129;UBERON:0007811!1.16e-08!129;UBERON:0002619!1.41e-08!22;UBERON:0000025!1.49e-08!194;UBERON:0000119!1.58e-08!312;UBERON:0000483!2.28e-08!309;UBERON:0001950!1.10e-07!20;UBERON:0000064!3.48e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.85e-21;32!UBERON:0001893;3.10e-21;34!UBERON:0003528;1.80e-20;34!UBERON:0002020;1.80e-20;34!UBERON:0002791;3.31e-20;32!UBERON:0000956;2.14e-18;25!UBERON:0000203;2.14e-18;25!UBERON:0002780;5.98e-16;41!UBERON:0001890;5.98e-16;41!UBERON:0002619;3.47e-15;22!UBERON:0000073;7.76e-14;53!UBERON:0002616;7.76e-14;53!UBERON:0001950;2.75e-13;20!UBERON:0000955;2.70e-10;68!UBERON:0001017;2.86e-09;75!UBERON:0001016;3.04e-08;83!UBERON:0000369;1.39e-07;4!UBERON:0002435;1.39e-07;4!UBERON:0000204;1.39e-07;4!UBERON:0000349;1.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-28,81;UBERON:0001016,1.05e-26,89;UBERON:0001049,2.70e-26,56;UBERON:0005068,2.70e-26,56;UBERON:0006241,2.70e-26,56;UBERON:0007135,2.70e-26,56;UBERON:0000073,6.00e-25,53;UBERON:0002616,6.00e-25,53;UBERON:0001893,2.87e-24,34;UBERON:0001869,6.78e-24,32;UBERON:0003528,3.22e-23,34;UBERON:0002020,3.22e-23,34;UBERON:0002780,1.87e-22,41;UBERON:0001890,1.87e-22,41;UBERON:0003080,1.87e-22,41;UBERON:0006240,1.87e-22,41;UBERON:0000955,4.66e-22,68;UBERON:0006238,4.66e-22,68;UBERON:0002791,1.17e-21,32;UBERON:0003075,1.57e-19,82;UBERON:0007284,1.57e-19,82;UBERON:0000956,4.16e-19,25;UBERON:0000203,4.16e-19,25;UBERON:0002346,4.96e-18,86;UBERON:0003056,8.44e-18,61;UBERON:0010371,3.41e-16,104;UBERON:0002619,8.17e-16,22;UBERON:0001950,7.63e-14,20;UBERON:0010314,1.04e-13,132;UBERON:0004121,2.14e-12,171;UBERON:0000924,2.14e-12,171;UBERON:0006601,2.14e-12,171;UBERON:0000025,6.35e-11,192;UBERON:0007023,1.48e-09,114;UBERON:0011216,1.72e-08,223;UBERON:0000349,7.44e-08,5;UBERON:0000369,1.11e-07,4;UBERON:0002435,1.11e-07,4;UBERON:0000204,1.11e-07,4;UBERON:0010082,1.11e-07,4;UBERON:0000483,3.70e-07,306;UBERON:0004111,3.79e-07,240;UBERON:0000119,6.34e-07,309 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,1.22866968250754,0.697801167972428,0.218441372130172,0.263766978228454,0.495065411840187,0.994192127183747,2.01697543935533,0,0.730310090387373,0.487932798790507,0.861847406537515,1.02000345622126,1.25381888591235,1.43117993565528,2.05311637609326,1.38096903554283,0.382067028739756,0.246301768349837,0.393553906568396,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0.697204805222715,2.27470771979874,0.587200878669695,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0.790152254325231,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0,0.552700035571697,0,0,0.267540828089713,0,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0.383959833463255,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.767175371061182,0.722878304769133,0.50133791063589,1.30361867064741,0.795285947051099,0,1.03988298880475,0.665188192387692,0.614843499851882,13.8837820027575,1.09288586487763,0.741568885568859,0,0.174129737299267,0,0,0,0.371457501329565,0.596287222100115,0,1.38856200643038,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0.66944122552934,0,1.52054421143703,1.22031028774085,0.735326160691737,0,0.625098097988558,0,0.450445921933289,4.5994991239765,0.949265659568129,0.732806975721629,0,0,2.18047026071267,0.993943903390637,0.506522046658319,0,0.286836620748814,0.354668382198357,1.68203280042692,1.06748995729705,0.49333509683432,0,0.404132016209064,0.490385709340376,0.151357427644931,1.15235184896,0,0.624320153660641,0.570471821544449,0.597794722207204,1.05691048779388,0.647491777472526,0.842704840213491,0.408308342509787,0.982674538494144,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0.336672227908132,0.500474079487857,0.277064115484183,0.877955241761676,0,0.300476117813194,0.567160915800105,0.717558542755448,0.640672166455702,0.635795703478686,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.506328996723799,0.0974370051611986,0,0.736399189138395,0.323292113637624,1.06502877754984,0.302256294682921,0.67824236924195,0,0.545492241181669,0.860413786167011,1.82960559194393,0.662648841607426,1.04574548582567,0.725627385107593,1.26160425437814,0.36497735907583,0,1.28648187638577,0,0,0.721879481669586,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,1.30727666455444,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,0,0,0,0.590789906681404,1.7658523976586,0.122988438543114,0.343135620597051,0.219500570817251,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.579652024875384,0.70445216541493,0.433099343283221,1.38895653772983,0.570762456703795,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,1.00789276919316,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0.144119953416961,0,0.63497894292169,0.763976851116555,0,0,0.616964956219941,0.300343057843917,0.571652865261156,0.336393253036082,0.43596006883328,0.80672114403045,0.775630294546667,0,0,1.32969058292435,0,1.80045161983499,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.144781306667579,1.02738161275192,1.07436577943937,0.224170287987055,0.197030760201927,0.215627574859517,0,0.76228387266739,1.30139853857622,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,0.24538298343828,0,0,0.831883446123229,0.178428988797162,0.946214490203608,0.35142424497814,1.80567659836631,0,1.03473071292505,0.664225598535437,1.29058417979192,0.173767228936166,0.979005787313703,1.02943027143257,0,0,0.213455115606889,0,0,0.907170879989041,1.73675465473144,0.61384789315225,0.841980283299221,0.768834895534206,0.511707249066704,0.482561763430822,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.232420756919918,0.120859449591622,0.200506470303285,0.184161977871793,0.114814448164607,0.364182336013434,0.393373244878272,0.902399225814824,1.23224539367064,0,2.92278449306521,0.844413031143006,1.13733384070897,0.170093705276516,0.647747748306418,3.08454505380579,1.08378575017541,1.50506932156456,1.01950509218015,0,1.11937377361089,1.09629938322967,0.522870902049801,1.28225062558195,0.328014645699706,0.650756789328606,0.103041011647722,0.457847324091717,0.165018999841176,0.574265537996172,0,0,0.773365746336976,0.462145851343933,0.921022048356777,0.137836572484531,0.644521469209642,0.435050081742686,1.27839941124151,0.890320356467374,0.165284915360978,0.960950336825531,0.255225424989168,1.2138933702666,0.464845549297286,0,1.3940745403212,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.632758849437452,0.38126038784765,0.255897791311334,0,0.95460974377781,0.78494864019923,0.179872457583315,0.823611089208164,0.471249609382746,0.404364963146632,1.58510321173008,0.842516912477962,0.48763373908959,0,1.05650146756755,0.136499911407986,0.707027159768564,0,1.10273068709225,0,0,0.578775534266688,0,0.608731130888112,0.6196469961995,0.845086807596724,0.860468113224309,0.491245205065606,0.35667105148125,0.354761064070598,0,0.658589785919804,0.75894634753143,1.39973888097993,0.384888450902048,0.670302275535787,2.17781969722645,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0.854592569019785,1.92495971052672,0,0.557409525377156,1.298422916788,0.924843963529383,0.478278818186467,0.997896857164083,0,0.211673582723883,1.29848776109822,0.842391534340376,1.59764275323235,0.626719583092093,0,0.338583555603207,0,0.201799707191048,0,0.687010689511529,0.614481528616916,0.447352215784832,0.500547425135725,0.586164286206121,0.835218521685727,1.23087398947712,0.811367035427949,1.6653598399891,1.4098700508785,0.18714054040822,0.146508179271894,1.21360521749513,0.111443384277478,0,0.23874448473769,0.296964680832639,0.921482106297696,2.98244294329889,1.54736358051564,0.222617410045812,0.329607748453519,1.05562704063997,0.19924798825107,0.552567831062295,1.25966373927138,0.511343412510774,0.369254416383208,0.933118762985422,0.179736702294654,0.179021174675609,0.511572370226872,0.493217028184668,2.3948309234694,1.11136990144637,1.93866549219044,2.41197055220813,1.99613798001194,0,1.48681999993533,0.724999575434793,0.455173793141999,0.254253650292766,0.945550727071745,0.344743373241465,0,0.173624994933292,3.54296554325536,2.41192877250816,0,0.110579259931225,0.295547618953547,2.4132393686937,0.10893846351899,0.139423744278603,0.230850775511391,0.683652335082007,0.23056390438806,0.359030577639089,0.54323685961004,0.31900115973192,0.0915975934018623,0.533034776018635,0,1.72678282034527,0.831058409500782,0.676786981851542,2.15668787749514,1.51039428278258,0.948768663620925,0.635746315921515,0.632994193584081,0.163232808159148,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0,0.123563938946503,0.417687798021821,2.49384192028505,0,1.63985112007737,2.55436704901932,0,0.485560759068186,0.789168805698781,0,1.53036380815245,0.063186579628488,3.15679180770434,0.933193722575224,0.664653872707185,0,0,0,0,0.832048038078832,0,0.587954384486266,0.957651272384428,0.34945333648406,1.0319161948297,0.19351266257817,0.365446585430928,0.328461828212837,0.193978032976839,0.0882561266915003,0.677942222341597,0.137041924646751,0,2.21587785845575,0,0.320635281006135,0.213452994739353,0.19980960958213,0,0.229073192331831,0.514784993585894,0,0.248505071130865,0,0.271808412147228,0.523014231561666,0.101998217636322,0.866851769704557,0.600420288709789,0.547621515567972,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0.360299883542404,2.32991899054908,0.315132729228895,0.494495150286999,0.606631894687664,0.196854963029498,0.931406652723629,1.59045937961861,1.22583065500418,1.12527203925513,1.78801267576404,2.07720169014593,0,0.77380195455795,2.18698403968889,0.335434687599266,0.236417121897595,0.524545881349981,0.105600336519406,0.179287339332845,0.575745591958336,1.42939065274673,0.662091970365432,0.25426853765475,1.62899880526114,0.864221491201268,0.979762080328227,0,0.985110248992068,0.170388021785422,0.566560457600628,0,0,1.0342636508924,1.05786081394152,0,0,0.213574825135389,0,0.414239055347196,0,0.197611631897944,1.58330377895165,0,0.544017803369474,1.2534494701135,1.22538230705385,0.655745261419609,0.314108192500469,1.77213635993397,1.09823638411767,0.500763722825999,1.14681839138014,0.443716206147409,1.4903136705932,0.553394539744923,0.499921631848426,0.606596470166591,0,0.235265819698172,0,1.01444720027578,0.447764408660622,0.467426619694449,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0.457680136793847,0.151230923763239,0.621748802331122,0.295710299979268,0.63718706865481,0,0,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0.813741466409323,0.545545977607678,0,0.928067519756987,1.59238355479446,0.800055529326307,1.03018711554838,0.336749488765919,1.26184898228651,0.770479321629213,0.857766365499703,1.04397716786085,0.226705925512272,0.231522474323834,0.97894681802587,1.07453304648892,0,1.09642024789354,0,0,0,0.512483037175893,0.690860683462397,0.303859956177382,0.553033744606923,0,0.132864840313363,0.163565394255844,0.327609848846413,0.491545817507439,0.422624246717254,0.39997479170986,1.06691729694141,0.172214979660816,0.567515953566836,0.184105950251841,0.839277046316667,0.622077260032973,0.511577485214607,0.107824811396682,0.314531883711793,0.327628914576042,0,0.212574920101683,0.247871528518004,0.558644917973244,1.27201740261367,0.552032215008773,0,0,0.3062454773532,3.21146125482298,5.6678630530234,0.478901577171454,2.2562800066483,2.52071696221718,2.00556032146232,1.77623210195036,1.42769420259154,0.490738592505128,0.11796972334774,0.183428598521679,0.231051332300676,0.381382095467167,0,0.198916222116275,0.451261970095544,0.60511520611056,0,0.523813388962845,0.49131575253029,0.295712172434091,2.22874029240702,0,0.826747186004736,2.09272173639893,1.64092442705466,0,0.496211178389294,0,1.66091155931474,0.535701835878287,0,0,0.227662191351298,0,0.460935950223117,0,1.76721305739762,1.71009211263408,1.30013224972365,0,0.470958557103084,2.82808061848803,0,0,0,0,0.571812353413251,0.632054446930906,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0.354996002191696,0.596493833314104,0.423387050190929,0.68732060563215,0,0.955538938977433,0.335566295393377,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0.485710993059139,1.63757624423474,0.397901550322736,0.594600453887843,0,0.769583617218004,0,0.154348316215889,0,0,0.490296643507811,0.471353094203252,1.96308467114945,0.891139200981258,1.2679671827502,0.679708458751268,0.187967835959707,0.257831551894309,0.299823467774787,0.178553938605658,0,0.481448200135009,0,0,0.716697915757256,0.315543124386369,2.7876510978275,2.18175345170189,0.5290268405154,0,0.462175628631418,0,1.38783067318587,0.327796715891087,0.506794004045748,0.713921808193872,0.26721740526556,0.36757959813938,0.752122617877125,17.2775431937586,38.5868347424897,4.1458471972939,0.827463966895162,0.213233981900981,0.23806443146374,2.32520075409622,0.682821857254437,0.672791175483681,0.318235791390825,0.202117188958219,0,0,0.606168477131288,0.286888821570705,0.332660356546013,0.407016343054873,0,0,0.179650404213174,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p4@TPGS2 | |||
}} |
Latest revision as of 09:52, 19 September 2015
Short description: | p4@TPGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TPGS2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 46bp_to_ENST00000334295, NM_015476, uc002kzv.1, uc002kzw.1, uc002kzx.1, uc002kzy.3, uc010xci.1_5end |
EntrezGene: | TPGS2 |
HGNC: | 24561 |
UniProt: | Q68CL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data