FFCP PHASE1:Hg19::chr8:59508442..59508449,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:59508442..59508449,-
|short_description=p17@NSMAF
|description=CAGE_peak_17_at_NSMAF_5end
|association_with_transcript=11bp_to_ENST00000523177_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000523177_5end | |||
|cluster_id=chr8:59508442..59508449,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_NSMAF_5end | |||
|id=chr8:59508442..59508449,- | |||
|ontology_enrichment_celltype=CL:0002057!6.70e-68!42;CL:0000766!9.62e-68!76;CL:0000860!1.78e-62!45;CL:0002009!7.45e-55!65;CL:0000839!1.67e-54!70;CL:0002194!1.80e-54!63;CL:0000576!1.80e-54!63;CL:0000040!1.80e-54!63;CL:0000559!1.80e-54!63;CL:0000557!1.75e-53!71;CL:0000738!1.30e-48!140;CL:0000763!6.13e-46!112;CL:0000049!6.13e-46!112;CL:0000037!1.01e-38!172;CL:0000566!1.01e-38!172;CL:0002031!3.15e-38!124;CL:0002087!1.33e-37!119;CL:0002032!1.02e-36!165;CL:0000837!1.02e-36!165;CL:0000988!1.69e-35!182;CL:0000094!8.65e-16!8;CL:0000134!2.89e-13!358;CL:0000219!9.53e-13!390;CL:0002320!1.24e-12!365;CL:0000081!5.35e-11!11;CL:0002393!5.96e-10!9;CL:0002397!5.96e-10!9;CL:0000048!2.44e-09!430;CL:0000063!2.46e-09!578;CL:0000723!6.06e-09!436;CL:0000034!1.95e-08!444;CL:0000775!4.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.98e-128;33!CL:0002057;8.98e-128;33!CL:0000473;2.70e-88;39!CL:0000234;2.70e-88;39!CL:0000576;8.71e-67;48!CL:0000766;6.90e-46;69!CL:0000763;2.65e-23;100!CL:0000094;1.10e-22;8!CL:0002087;2.18e-16;104!CL:0000081;2.30e-16;11!CL:0000775;5.15e-16;3!CL:0000738;1.79e-13;136!CL:0000771;1.50e-11;2!CL:0000988;2.07e-07;177!CL:0000219;6.23e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.22e-124,42;CL:0002057,4.22e-124,42;CL:0000473,8.00e-108,48;CL:0000234,8.00e-108,48;CL:0000766,1.25e-98,72;CL:0002194,5.02e-85,59;CL:0000576,5.02e-85,59;CL:0000040,5.02e-85,59;CL:0000559,5.02e-85,59;CL:0002009,4.39e-82,61;CL:0000839,1.70e-75,66;CL:0000557,2.71e-74,67;CL:0000763,6.32e-64,108;CL:0000049,6.32e-64,108;CL:0000738,1.59e-49,136;CL:0002087,5.95e-41,115;CL:0002032,7.25e-41,161;CL:0000837,7.25e-41,161;CL:0002031,5.36e-39,120;CL:0000037,6.72e-39,168;CL:0000988,1.35e-36,177;CL:0000094,9.99e-23,8;CL:0000081,2.15e-16,11;CL:0000775,4.40e-16,3;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000219,4.79e-13,386;CL:0000771,1.71e-11,2;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-92;42!CL:0000049;1.83e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.15e-48!80;UBERON:0002390!1.03e-44!102;UBERON:0003061!1.03e-44!102;UBERON:0001474!1.74e-43!86;UBERON:0002193!7.99e-43!112;UBERON:0002405!8.96e-38!115;UBERON:0004765!2.28e-36!101;UBERON:0001434!2.28e-36!101;UBERON:0002204!4.47e-17!167;UBERON:0003081!5.63e-15!216;UBERON:0002384!8.95e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.00e-65,76;UBERON:0001474,9.71e-60,82;UBERON:0004765,6.17e-54,90;UBERON:0002405,5.16e-52,93;UBERON:0002390,4.54e-49,98;UBERON:0003061,4.54e-49,98;UBERON:0001434,5.67e-48,100;UBERON:0002193,5.47e-44,108;UBERON:0002204,2.67e-26,167;UBERON:0003081,1.60e-20,203;UBERON:0002384,5.82e-14,371;UBERON:0000926,6.15e-11,315;UBERON:0004120,6.15e-11,315;UBERON:0006603,6.15e-11,315 | |||
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| ||
|short_description=p17@NSMAF | |||
}} | }} |
Latest revision as of 15:37, 18 September 2015
Short description: | p17@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_NSMAF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 11bp_to_ENST00000523177_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.22e-124 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.22e-124 | 42 |
defensive cell | 8.00e-108 | 48 |
phagocyte | 8.00e-108 | 48 |
myeloid leukocyte | 1.25e-98 | 72 |
monopoietic cell | 5.02e-85 | 59 |
monocyte | 5.02e-85 | 59 |
monoblast | 5.02e-85 | 59 |
promonocyte | 5.02e-85 | 59 |
macrophage dendritic cell progenitor | 4.39e-82 | 61 |
myeloid lineage restricted progenitor cell | 1.70e-75 | 66 |
granulocyte monocyte progenitor cell | 2.71e-74 | 67 |
myeloid cell | 6.32e-64 | 108 |
common myeloid progenitor | 6.32e-64 | 108 |
leukocyte | 1.59e-49 | 136 |
nongranular leukocyte | 5.95e-41 | 115 |
hematopoietic oligopotent progenitor cell | 7.25e-41 | 161 |
hematopoietic multipotent progenitor cell | 7.25e-41 | 161 |
hematopoietic lineage restricted progenitor cell | 5.36e-39 | 120 |
hematopoietic stem cell | 6.72e-39 | 168 |
hematopoietic cell | 1.35e-36 | 177 |
granulocyte | 9.99e-23 | 8 |
blood cell | 2.15e-16 | 11 |
neutrophil | 4.40e-16 | 3 |
mesenchymal cell | 5.81e-15 | 354 |
connective tissue cell | 1.54e-14 | 361 |
motile cell | 4.79e-13 | 386 |
eosinophil | 1.71e-11 | 2 |
multi fate stem cell | 3.23e-11 | 427 |
somatic stem cell | 5.78e-11 | 433 |
stem cell | 1.22e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.00e-65 | 76 |
bone element | 9.71e-60 | 82 |
skeletal element | 6.17e-54 | 90 |
immune system | 5.16e-52 | 93 |
hematopoietic system | 4.54e-49 | 98 |
blood island | 4.54e-49 | 98 |
skeletal system | 5.67e-48 | 100 |
hemolymphoid system | 5.47e-44 | 108 |
musculoskeletal system | 2.67e-26 | 167 |
lateral plate mesoderm | 1.60e-20 | 203 |
connective tissue | 5.82e-14 | 371 |
mesoderm | 6.15e-11 | 315 |
mesoderm-derived structure | 6.15e-11 | 315 |
presumptive mesoderm | 6.15e-11 | 315 |