FFCP PHASE1:Hg19::chr8:57358373..57358395,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:57358373..57358395,+
|short_description=p1@ENST00000518662,p1@uc003xtb.1
|description=CAGE_peak_1_at_ENST00000518662_5end,CAGE_peak_1_at_uc003xtb.1_5end
|a...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000518662,uc003xtb.1_5end | |||
|cluster_id=chr8:57358373..57358395,+ | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_1_at_ENST00000518662_5end,CAGE_peak_1_at_uc003xtb.1_5end | |||
|id=chr8:57358373..57358395,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.05e-11!9;CL:0000447!1.05e-11!9;CL:0000667!1.14e-09!6;CL:0000058!1.14e-09!6;CL:0000138!1.14e-09!6;CL:0002556!3.03e-09!6;CL:0000499!6.25e-09!27;CL:0000135!1.23e-07!3;CL:0000386!1.23e-07!3;CL:0000388!1.23e-07!3;CL:0000327!4.98e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.08e-23;3!CL:0000388;2.08e-23;3!CL:0000153;7.03e-22;9!CL:0000447;7.03e-22;9!CL:0000138;2.32e-21;6!CL:0000499;9.80e-17;28!CL:0000327;4.49e-13;15!CL:0002556;2.27e-12;6!CL:0000062;4.60e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.26e-23,3;CL:0000388,1.26e-23,3;CL:0000153,7.04e-22,9;CL:0000447,7.04e-22,9;CL:0000058,2.26e-21,6;CL:0000138,2.26e-21,6;CL:0000499,8.53e-17,28;CL:0000327,4.50e-13,15;CL:0002556,2.41e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.60e-09;1!UBERON:0003852;1.60e-09;1!UBERON:0006222;7.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!3.03e-09!6;UBERON:0003672!3.03e-09!6;UBERON:0002308!6.88e-08!9;UBERON:0000125!6.88e-08!9;UBERON:0000043!1.23e-07!3;UBERON:0000075!1.87e-07!13;UBERON:0005944!1.87e-07!13;UBERON:0004288!1.87e-07!13;UBERON:0003089!1.87e-07!13;UBERON:0009663!2.36e-07!7;UBERON:0000073!3.08e-07!94;UBERON:0001016!3.08e-07!94;UBERON:0003129!8.18e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.08e-23;3!UBERON:0000043;2.08e-23;3!UBERON:0007845;2.08e-23;3!UBERON:0001758;2.27e-12;6!UBERON:0003672;2.27e-12;6!UBERON:0011137;9.62e-12;11!UBERON:0010323;9.62e-12;11!UBERON:0003129;1.12e-10;7!UBERON:0005705;1.60e-09;1!UBERON:0008193;1.60e-09;1!UBERON:0010912;1.60e-09;1!UBERON:0002514;1.60e-09;1!UBERON:0003457;1.60e-09;1!UBERON:0008907;1.60e-09;1!UBERON:0008001;1.60e-09;1!UBERON:0007213;1.60e-09;1!UBERON:0009891;1.60e-09;1!UBERON:0007914;1.60e-09;1!UBERON:0007375;1.60e-09;1!UBERON:0003323;1.60e-09;1!UBERON:0010258;1.60e-09;1!UBERON:0005253;1.60e-09;1!UBERON:0007842;1.60e-09;1!UBERON:0002397;1.60e-09;1!UBERON:0003113;1.60e-09;1!UBERON:0003277;1.60e-09;1!UBERON:0001709;1.60e-09;1!UBERON:0002244;1.60e-09;1!UBERON:0005620;1.60e-09;1!UBERON:0010364;1.60e-09;1!UBERON:0004288;1.60e-09;1!UBERON:0001874;7.55e-09;1!UBERON:0000075;4.11e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.26e-23,3;UBERON:0000043,1.26e-23,3;UBERON:0007845,1.26e-23,3;UBERON:0001758,2.41e-12,6;UBERON:0003672,2.41e-12,6;UBERON:0010323,1.00e-11,11;UBERON:0003129,1.18e-10,7;UBERON:0005705,1.60e-09,1;UBERON:0008193,1.60e-09,1;UBERON:0010912,1.60e-09,1;UBERON:0002514,1.60e-09,1;UBERON:0003457,1.60e-09,1;UBERON:0008907,1.60e-09,1;UBERON:0008001,1.60e-09,1;UBERON:0007213,1.60e-09,1;UBERON:0009891,1.60e-09,1;UBERON:0007914,1.60e-09,1;UBERON:0009292,1.60e-09,1;UBERON:0003099,1.60e-09,1;UBERON:0007375,1.60e-09,1;UBERON:0003323,1.60e-09,1;UBERON:0010258,1.60e-09,1;UBERON:0007842,1.60e-09,1;UBERON:0009494,1.60e-09,1;UBERON:0010042,1.60e-09,1;UBERON:0010045,1.60e-09,1;UBERON:0010259,1.60e-09,1;UBERON:0010359,1.60e-09,1;UBERON:0009526,1.60e-09,1;UBERON:0002397,1.60e-09,1;UBERON:0003113,1.60e-09,1;UBERON:0003277,1.60e-09,1;UBERON:0001709,1.60e-09,1;UBERON:0004066,1.60e-09,1;UBERON:0002244,1.60e-09,1;UBERON:0005620,1.60e-09,1;UBERON:0004362,1.60e-09,1;UBERON:0010364,1.60e-09,1;UBERON:0010046,1.60e-09,1;UBERON:0005868,1.60e-09,1;UBERON:0007238,1.60e-09,1;UBERON:0004288,1.60e-09,1;UBERON:0004068,1.60e-09,1;UBERON:0010334,1.60e-09,1;UBERON:0003852,1.60e-09,1;UBERON:0010253,1.60e-09,1;UBERON:0011137,3.05e-09,14;UBERON:0001874,9.91e-09,1;UBERON:0000075,4.23e-08,16 | |||
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| ||
|short_description=p1@ENST00000518662,p1@uc003xtb.1 | |||
}} | }} |
Latest revision as of 19:03, 31 July 2015
Short description: | p1@ENST00000518662, p1@uc003xtb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000518662_5end, CAGE_peak_1_at_uc003xtb.1_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | 7bp_to_ENST00000518662, uc003xtb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.26e-23 | 3 |
tendon cell | 1.26e-23 | 3 |
GAG secreting cell | 7.04e-22 | 9 |
carbohydrate secreting cell | 7.04e-22 | 9 |
chondroblast | 2.26e-21 | 6 |
chondrocyte | 2.26e-21 | 6 |
stromal cell | 8.53e-17 | 28 |
extracellular matrix secreting cell | 4.50e-13 | 15 |
fibroblast of periodontium | 2.41e-12 | 6 |