FFCP PHASE1:Hg19::chr17:80354807..80354821,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:80354807..80354821,+ | |||
|description=CAGE_peak_at_chr17:80354807..80354821,+ | |||
|id=chr17:80354807..80354821,+ | |||
|ontology_enrichment_celltype=CL:0002570!3.04e-16!8;CL:0000188!4.77e-15!9;CL:0000057!2.41e-11!75;CL:0000055!6.04e-11!180;CL:0002620!4.65e-09!23;CL:0000499!1.63e-08!27;CL:0000515!5.10e-08!4;CL:0002320!1.30e-07!365;CL:0000135!3.78e-07!3;CL:0000386!3.78e-07!3;CL:0000388!3.78e-07!3;CL:0000153!4.88e-07!9;CL:0000447!4.88e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002570;2.45e-34;8!CL:0002602;2.22e-12;2!CL:0002620;4.82e-11;23!CL:0000135;5.71e-09;3!CL:0000388;5.71e-09;3!CL:0000134;5.97e-07;55!CL:0000228;8.72e-07;1!CL:0002372;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.25e-34,8;CL:0002602,1.25e-12,2;CL:0002620,4.68e-11,23;CL:0000135,5.72e-09,3;CL:0000388,5.72e-09,3;CL:0002320,7.02e-09,361;CL:0000057,6.36e-07,76;CL:0000228,8.02e-07,1;CL:0002372,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.29e-10;5!DOID:450;1.29e-10;5!DOID:66;1.29e-10;5!DOID:423;1.29e-10;5!DOID:0080000;1.29e-10;5!DOID:11722;1.29e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.16e-10,5;DOID:450,1.16e-10,5;DOID:66,1.16e-10,5;DOID:423,1.16e-10,5;DOID:0080000,1.16e-10,5;DOID:11722,1.16e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0001013!5.60e-16!14;UBERON:0003102!1.70e-11!95;UBERON:0002199!2.19e-11!45;UBERON:0002416!2.19e-11!45;UBERON:0002097!5.71e-08!40;UBERON:0002384!7.00e-08!375;UBERON:0000043!3.78e-07!3;UBERON:0004905!9.22e-07!5;UBERON:0000982!9.22e-07!5;UBERON:0004770!9.22e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.29e-25;14!UBERON:0006444;2.22e-12;2!UBERON:0001995;2.22e-12;2!UBERON:0004715;2.22e-12;2!UBERON:0007846;5.71e-09;3!UBERON:0000043;5.71e-09;3!UBERON:0007845;5.71e-09;3!UBERON:0002418;1.54e-08;3!UBERON:0004755;1.54e-08;3!UBERON:0002199;1.09e-07;46!UBERON:0002416;1.09e-07;46!UBERON:0004905;7.64e-07;8!UBERON:0000982;7.64e-07;8!UBERON:0004770;7.64e-07;8!UBERON:0000941;8.72e-07;1!UBERON:0001785;8.72e-07;1!UBERON:0002464;8.72e-07;1!UBERON:0004904;8.72e-07;1!UBERON:0001021;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.06e-25,14;UBERON:0006444,1.25e-12,2;UBERON:0001995,1.25e-12,2;UBERON:0004715,1.25e-12,2;UBERON:0002199,1.63e-10,46;UBERON:0002416,1.63e-10,46;UBERON:0002097,1.13e-09,41;UBERON:0007846,5.72e-09,3;UBERON:0000043,5.72e-09,3;UBERON:0007845,5.72e-09,3;UBERON:0002418,1.06e-08,3;UBERON:0004755,1.06e-08,3;UBERON:0002384,1.79e-08,371;UBERON:0004905,5.81e-07,8;UBERON:0000982,5.81e-07,8;UBERON:0004770,5.81e-07,8;UBERON:0000941,7.57e-07,1;UBERON:0001785,7.57e-07,1;UBERON:0002464,7.57e-07,1;UBERON:0004904,7.57e-07,1;UBERON:0001021,7.57e-07,1;UBERON:0003902,7.57e-07,1;UBERON:0005425,7.57e-07,1 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0.631719873426831,2.61185628199839,0,0,0,0,3.34169152992126,1.98838425436749,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,1.1409436430889,0,0,0.161872944368132,0,0.61246251376468,0,1.23990937410919,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,0,0.300476117813194,0,0,1.70845911054854,1.27159140695737,0,2.26715564324566,0.257640540045629,0.18611685633159,0,0.194874010322397,0,1.56484827691909,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14592750554308,0,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,2.535908257668,0,0,0,0,0,0,0,0,3.25736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,1.07436577943937,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.434418072340414,0.587403472388222,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,2.7101961484557,0.519254429183621,0.348631135379878,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,1.25671933779759,0.154048617114644,0.460511024178389,0.275673144969061,0.322260734604821,0.870100163485371,0.511359764496605,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0.399358000997982,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73137007217185,0.934853239388898,1.66441758450784,1.32582103692562,0.754703705257725,1.77962244319307,0.457680136793847,0,1.08806040407946,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,1.20008329398946,1.03018711554838,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0172176719101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55588541783528,4.15958065768276,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.12729431655633,0,0.870866991587845,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:80354807..80354821,+ | |||
}} |
Latest revision as of 23:06, 25 July 2015
Short description: | p@chr17:80354807..80354821, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80354807..80354821, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.25e-34 | 8 |
annulus pulposus cell | 1.25e-12 | 2 |
skin fibroblast | 4.68e-11 | 23 |
fibrocyte | 5.72e-09 | 3 |
tendon cell | 5.72e-09 | 3 |
connective tissue cell | 7.02e-09 | 361 |
fibroblast | 6.36e-07 | 76 |
multinucleate cell | 8.02e-07 | 1 |
myotube | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 5.06e-25 | 14 |
annulus fibrosus | 1.25e-12 | 2 |
fibrocartilage | 1.25e-12 | 2 |
annulus fibrosus disci intervertebralis | 1.25e-12 | 2 |
integument | 1.63e-10 | 46 |
integumental system | 1.63e-10 | 46 |
skin of body | 1.13e-09 | 41 |
dense regular connective tissue | 5.72e-09 | 3 |
tendon | 5.72e-09 | 3 |
regular connective tissue | 5.72e-09 | 3 |
cartilage tissue | 1.06e-08 | 3 |
skeletal tissue | 1.06e-08 | 3 |
connective tissue | 1.79e-08 | 371 |
articulation | 5.81e-07 | 8 |
skeletal joint | 5.81e-07 | 8 |
articular system | 5.81e-07 | 8 |
cranial nerve II | 7.57e-07 | 1 |
cranial nerve | 7.57e-07 | 1 |
nerve trunk | 7.57e-07 | 1 |
nerve connecting eye with brain | 7.57e-07 | 1 |
nerve | 7.57e-07 | 1 |
retinal neural layer | 7.57e-07 | 1 |
presumptive neural retina | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.16e-10 | 5 |
myotonic disease | 1.16e-10 | 5 |
muscle tissue disease | 1.16e-10 | 5 |
myopathy | 1.16e-10 | 5 |
muscular disease | 1.16e-10 | 5 |
myotonic dystrophy | 1.16e-10 | 5 |