FFCP PHASE1:Hg19::chr17:74068567..74068608,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |||
|TSSclassifier=strong | |||
|UniProt=E7ETK6,Q9UHB9,F5H5Y3,G3V1U4,F5H281,B3KMI9 | |||
|association_with_transcript=0bp_to_ENST00000304220,ENST00000307877,ENST00000355113,ENST00000539137,ENST00000540937,NM_014230,uc002jqk.1,uc002jql.1,uc010wsu.1_5end | |||
|cluster_id=chr17:74068567..74068608,- | |||
|description=CAGE_peak_1_at_SRP68_5end | |||
|id=chr17:74068567..74068608,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.72e-23!239;DOID:162!1.13e-22!235;DOID:0050687!1.16e-20!143;DOID:305!1.25e-13!106;DOID:3095!9.60e-07!22;DOID:2994!9.60e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.72e-23,239;DOID:162,1.13e-22,235;DOID:0050687,1.16e-20,143;DOID:305,1.25e-13,106;DOID:3095,9.60e-07,22;DOID:2994,9.60e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.10e-09!365;UBERON:0000481!3.75e-08!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.42e-09,223 | |||
|phase1_expression=33.2471434065119,43.2483058259786,48.2064062008221,53.0388481271591,54.0822924257018,39.2552335845166,40.5279805069297,51.8010296210001,60.0726944859629,44.2321085702716,35.5878595665938,50.2415155899396,46.1592211899794,61.140578362263,60.9771171339365,36.3055579083959,33.1481990413187,33.5942641578192,44.4018846899361,43.8310966753365,36.1081223502328,36.6742024129363,41.5042181340032,53.6547746285706,54.2344203049548,74.9615510387402,84.3994059545442,94.2955160137877,47.9904417755663,54.8876039279014,42.4196177886048,47.8099036729042,66.8677139687715,84.3039143180276,44.6211075342537,45.9206620934372,30.828046130159,28.8077612436576,37.5018116769165,42.9681524017387,48.1418269615837,47.61236890479,48.9393578504954,31.5514178151655,38.5433462562586,33.7191845051064,34.1670684251356,29.6040879375715,32.828875314881,27.6184696629264,26.1283920659683,29.5602787360732,31.3718569470323,36.7926269642781,36.5651513804723,31.6247130431576,29.7467703563052,31.0118408534217,26.0171308515267,30.809186599305,28.1308335351578,39.2523047222192,30.318475958488,38.7864522984752,31.9230162491442,38.0148100543064,31.1411124497787,25.8786125214446,33.3749067788929,25.4110948304986,49.0373597133029,36.4594859627689,34.1779378436155,32.533314092039,33.3788750945118,32.916407344815,26.0602424259869,28.2332558542032,40.3421222609671,22.2309940118174,30.0364182570626,33.427540138928,36.9592113368778,34.4067325095143,44.4754626931777,37.9789898084191,34.4340548850971,41.3821756767228,36.3574680031674,49.6107952358389,29.0298614245819,31.7108082260307,34.4045905312706,37.0079720021272,67.8215361207659,51.8866647006902,56.6524137927839,67.9908619556055,59.2132317118587,29.9263826749314,43.0217391956339,47.8182283792081,52.6032166701361,39.9963540217773,32.9958616371818,30.7932113471233,40.0789718372223,41.8858615502958,39.7981603533227,47.8514302396698,34.543752223231,39.4132196599671,33.8093364009498,37.7232567606495,26.1338809512442,44.7571903655386,34.8730649177748,34.0191171027804,42.760327951296,60.2088633072543,29.9498388773953,35.1667256445898,43.064484056243,52.9864570179292,44.9750615588445,50.6703319374196,36.129631864526,40.1197419017218,50.0113166115159,43.3024967609569,112.151158504422,50.9732653374763,57.9217405151192,43.7341374385325,46.6244256891377,48.3787373329151,68.3945914463945,46.716947549053,52.0886842574014,58.980019725042,52.6130366301825,51.8022243593453,44.0797298833976,63.4041397161374,38.6211398449073,41.9652666891234,41.3499257213671,27.4264217951143,26.3117658958859,40.117410143593,71.3557042446471,50.7538411112613,62.485290289367,80.2737277532094,56.6324238883373,61.9015594365152,64.3704496933377,35.1446792470287,53.7207056656932,48.5344888508772,42.2970782964604,47.1368705545478,53.205528545501,58.826092855339,61.5707880390137,56.6160277321066,98.3438652102624,92.5666369572909,36.795992991812,69.2963931484734,48.7316638854883,10.5424333948851,23.2668158488995,62.3614494563824,59.6366342034382,57.1103607607255,45.0191214764944,49.6227353895448,56.0376043873404,57.1891152145153,65.11688739512,42.9201534245858,55.3955643011584,45.3974964874849,52.6347328025337,57.9698947880087,55.8890646745599,38.1943933889088,56.500973906288,58.7585976190783,45.7312962488511,62.944891273058,69.6053660782966,73.3153210985737,53.8967012112918,57.7321291365309,47.7365109032036,60.5881457213847,56.376859875511,47.3283908207774,23.7143986799359,58.9176398839232,68.5649488898364,48.2091560942478,57.9450459562706,50.2639985110392,58.142128796853,51.4982111546495,57.4046834204358,62.5723149238403,66.9704807664215,49.5150308539264,62.7589903062093,62.0913701509966,54.904472617819,50.4641233401386,63.9186753857463,76.7398673702108,63.6064799618288,48.0088788751871,62.1266786904075,59.5444900525354,74.4371000243041,55.0793431515396,56.1857008417119,52.4852409561877,55.7419837012251,59.3733362080254,54.8435410344127,59.5014455788226,51.4734535786282,54.7466038613745,64.1443082552245,64.9673347574814,42.821825619269,47.3655286592619,47.6440457901926,63.7673652214759,68.9511382419436,71.0982538156272,61.323448839211,60.7883649017813,77.5874924493286,65.1235218413594,66.1266337472416,68.1002467795111,50.1945709144761,42.0725321410337,46.5078632804482,41.1624391879517,73.5179201966619,46.1928791838484,75.0303181485383,33.1097324560988,65.7988146205658,48.5536903144827,55.4238941313559,96.6655078015528,62.7300787848576,77.5891170428478,27.3678976460673,44.7171957670219,75.0522978531421,47.6473964447566,48.724608107866,53.5599521193584,50.9284063834272,41.0948968826732,45.831855081638,41.2073357805539,40.1333719922458,46.3328444975691,46.2242914717945,45.9295786535207,57.2819057158111,66.9178458984064,76.9307710017467,69.1708773663229,72.8427090413901,132.526410994009,49.0429777453669,47.270810343296,51.1625834630213,55.2941858407544,41.7181165499551,35.1429351513615,41.0261065235164,51.3217338068116,37.0178973731965,44.1504295030559,37.4432626746057,62.1206207273298,92.4235345926554,58.743966942581,40.8498621794578,35.7656445851882,56.635284421252,43.8797892365036,58.244164670365,47.068949489972,58.1581441295441,51.9523249081394,72.3468647910227,45.0375932474898,60.0965445849961,61.5641388315159,68.5906461073113,68.1078610722749,32.5554527224353,33.1182714268112,43.1883321906486,32.8384207731214,30.1354254859276,42.1667878966063,43.3720988439765,53.9851098420335,201.118036107413,55.4512404536828,64.7250416033708,49.2417648909713,62.6555954923817,38.6180289995777,47.6536940439533,48.1286386049056,35.5732473911449,33.8363620029816,47.1706175794394,43.5542289869307,59.9662426553973,6.74106321552464,8.97484377612075,4.97298616123243,62.3272777933231,53.0180752323258,61.3058953561402,53.2405405518866,57.4541343926861,60.8731322030988,59.3906974013056,53.2674596518062,27.2889004867182,37.2503056653018,73.7290414374335,59.3668722704284,59.5152759106368,33.2861967686659,41.5203542811136,33.082884179662,49.1828377866446,38.7421034826503,74.2662550043336,53.2593406433591,52.6159110393644,43.6669741761047,50.0286032919084,52.4834376589848,48.436598418655,33.2609711893357,55.1728949522574,41.5570586045975,78.9553632269596,53.6236410445644,67.3442679313235,76.3304010899923,63.3346562606778,62.3634759892771,49.1240852243048,55.985241273025,64.1812765240152,78.1171110748816,50.6140241743377,36.5471686455004,52.9095365907329,26.6678921520131,36.5348061633152,55.0979502820811,56.8666920354483,52.2187675198903,88.9573574340814,26.2186329573492,43.8933228821042,24.081109145033,49.4459969707374,39.06057241965,46.3420742274909,51.5260710117946,42.8754139680837,60.5222295274678,30.8333766957723,58.5681110395745,57.3938434877813,123.8019164344,109.4075968947,78.1001131674794,64.3559643576156,43.3846610579231,61.6759182703738,65.7787595079532,61.8619809146302,70.7101616845642,57.0401500250533,57.5716274839487,67.3290356587197,64.8153219508248,76.6922007274938,101.668545636141,47.8547671854691,99.2357830192945,61.3596125072417,64.5365311002812,65.5215033950964,95.4904098545875,65.4736417289937,46.1064485799789,50.4081875962662,52.2405836608268,42.4260541070021,48.0896725572463,49.5638504201945,29.9400415834261,71.8937499896986,56.9583813787427,28.2581510471723,52.7026300719112,66.4379611961253,61.4980740244483,68.5398612533541,66.5743348926635,64.8738022608031,32.6714605190026,60.1972319389273,58.1075807162155,62.1074596906335,63.3496335152633,62.1544641411335,56.7906303852508,66.343897524122,43.8450885253763,32.4114299189345,60.3423171882902,61.2789338427366,57.007523650354,59.4377721343029,60.9498246867219,56.2967005005184,73.4742366051375,47.1832215213895,39.0549125300679,50.0528237299051,45.9162540256515,39.1926886674381,77.9399113076648,48.9320661141125,55.5344022792745,60.2520324971387,45.2030641304791,52.2261574569639,53.2116184244011,78.1059560703662,37.0436754739484,32.8793999071221,36.4574199791464,37.1641569714151,34.9657932123265,47.3385517170684,42.122452104573,33.3112574043594,69.4356462328575,121.272461763183,94.5855233686782,55.3693461874642,48.9072631990148,45.175070526243,62.4950989096984,59.873811429845,49.4083854941506,56.3051730045528,64.275144174362,48.5779118136284,71.6656892164224,57.6582016444726,60.1522745016161,64.6694591202125,53.3152409344282,56.7057177206844,80.0590926857814,43.9686841287379,54.0743745182886,58.603140267813,51.7232339306916,61.5472500516427,72.385605212763,166.167988579412,46.7888323763451,100.920806303339,149.44622539312,66.434891844918,50.5453218488034,68.6900553102246,48.4778721607031,61.3734077101852,43.928985191735,55.2354306348708,64.5037474408387,56.666415922679,114.926913207389,47.306199634735,47.29871190308,65.23775111155,57.5826686045592,48.9022530490131,71.0450348949058,47.554937363502,66.3427101435164,48.522175675242,73.8717846431027,107.949768329392,54.7382436142753,62.7372059850898,33.5276329285716,58.9026047766576,63.0066284961892,71.4314355846255,29.9420697001791,72.1384898206096,100.841379995614,42.049975375218,72.7140134544343,132.211898152238,85.8087284817609,61.7090638102222,54.8216673160518,53.476498439454,46.0585520623196,105.642480235857,57.9810598004916,101.954077656589,42.2633095103573,75.2491912238126,64.6005088667612,87.0004164298485,53.9421312111617,33.2710803073244,115.28195219403,71.5368425945884,78.6606972715338,45.6171658416645,54.0425801070988,56.5016862579753,52.1185820798256,52.4314056359383,67.6481545333637,72.6418027187322,83.7187021536748,68.1355643121921,65.0855303243955,86.7793721232868,86.2982083919631,57.2947156638609,63.3261760024055,93.6962810083255,46.7773107606897,45.7325608482263,37.2728388409512,99.631099236689,81.6757636436384,86.8790619885389,47.585199884358,55.3778576636164,70.7478626090524,61.1223543872481,35.2196314077761,52.6833423588981,75.3656209442336,55.6557293823854,26.0161847385917,41.8927022936875,104.174129654243,101.614427569302,138.248005523095,93.6707235127662,128.084630710148,166.066677384413,83.3905969867293,50.7549303228088,68.5560966423767,94.2686863126313,59.1132012680933,50.6707337901887,52.2837538713714,76.6310143809554,62.4182767916025,70.3729466946003,57.9994318600748,55.5131036889537,61.6927422330854,53.3093086875861,79.4858446811959,66.6662681415403,54.3632844002752,48.7365627129325,48.8807357953117,35.1664912864549,79.5379102690665,80.4046905084728,66.2356691747183,57.765973993248,69.3329148455114,112.661748546828,78.2808226984017,81.6948229699322,55.9970214823407,52.3000567721749,51.6361448290419,92.6849415098793,48.5437034654495,65.7541125372534,51.788808793025,62.8385402862572,68.06064593147,73.223048506835,61.9004901546872,72.5392021350805,56.6855501902356,55.6950986914961,101.604567158958,242.311575017104,126.525790785401,121.316143537077,117.214762762428,113.191603741961,52.243445884589,68.3897533236001,99.5646898675618,48.8689571333658,49.7892760481986,45.2829968451812,49.7192300328816,36.3686918642236,64.4552796141642,79.8334556486253,55.2428008167379,54.395407895993,84.0578678694476,69.0256256431452,103.250376157862,52.1727588252558,72.8301167401975,89.7567937921267,71.6759474314901,50.9890679808748,67.9301709027571,83.8111340937412,58.5319672942787,60.1469716902539,87.8168709280974,67.1209230245618,50.3526177866441,118.164622114457,97.1909622808771,75.9625560206423,69.0718721870338,47.7339734177595,68.8554856336537,56.7507505825658,48.6242701375712,75.4876433850147,60.7745065920671,96.3895299232975,63.106065190859,49.1352192284492,57.5929684315308,65.2466535112511,64.8633417513468,81.5182725569627,106.406902994512,118.055047656229,48.7397816336561,87.5230216625765,60.9786676884385,84.3926673111008,109.73279819073,70.8201378919495,68.7971453843371,67.2860244336771,99.7553349368658,61.8812792168223,73.1348534145683,82.7345116859175,74.8987913028528,62.3135887355043,67.9233334731953,49.829428409406,53.5485760048801,52.9308233171337,54.8693318057215,52.1928679463408,72.0021387579935,49.9281454501601,52.7894053379282,55.9853380585155,52.370817767925,51.6527611193617,48.0824348791099,33.1300534586852,68.7611539115878,57.4641763080088,63.1574075409832,46.8674097477279,43.3924518681491,56.0038870528415,52.1961471877845,57.2474130902063,58.0450531851795,42.568982520014,75.6978817553488,44.8910182180164,64.8378946965099,85.6633154998186,62.6525963536557,70.7400922271875,73.8035458714724,42.9796737174266,103.36315037834,65.0120308972983,44.262919451105,74.0537988719166,87.3938764579932,58.9488314984121,133.142874014117,48.3253565921683,46.5026941096771,36.802213707565,58.9697727923543,66.3586853635042,102.697691952293,78.7950339668424,48.43804528114,57.1753732473908,155.499371277313,102.178802389772,52.7345744102306,83.9804301044513,130.963836214939,86.9067979857255,61.9627810912232,97.4149972672764,41.5844698387362,61.4341519093864,50.8136633461909,107.818469168836,81.0911094166217,51.1024107608122,84.0599285699743,49.3746321166958,62.4740773800528,64.8715173474241,66.5973908730249,115.734547816435,45.1256001329661,17.6450187355203,76.0729777106397,93.8173501121055,38.5477434699717,87.8422080584179,123.514300345084,88.2291558889276,50.1381391092468,54.1562575563377,72.4877922363106,38.390830868441,58.3632147990236,96.6167279089861,101.596821460302,56.8337527024687,84.67008135272,89.3050760750953,69.1584866492361,60.9240916918801,141.787142399812,71.2793706579513,35.5533625861843,100.879429101722,55.575651979601,136.124343134346,98.8881189930467,88.3908029199173,94.8320096657084,78.9055285507621,82.4137132691697,79.0338118149112,66.2595428445731,54.3616989916617,71.8440077565111,71.495004862817,63.8246740773428,121.909616473708,55.0236580882103,109.038219401705,59.6979707858371,59.3553168331172,63.9145670007119,57.330202546446,50.6053932770727,64.153526363487,60.5617826167933,140.303625748182,125.86868426265,55.3267158315308,46.9475812008362,122.352960141094,80.0222887405716,57.5093523550548,55.8147801172483,56.7338647255845,140.442510417503,53.355498334263,68.7988036063752,72.3704643731716,58.3012387674543,76.3206210389007,187.754362784489,84.3888272358351,41.7533195281752,40.7997234169677,53.3381976693601,56.7009709209899,46.2599153124742,96.4559540612718,58.3784143918229,46.4965558185354,45.9186240742271,55.0770092469972,46.5614123397908,63.2482670125076,176.050380684915,109.540124650139,52.8742592582213,38.039015482506,94.3095486517384,52.0670905608389,51.4373946029146,73.3568084488978,92.1338323205193,55.4044948593636,41.0835797448541,97.1347396367868,66.0570168102539,65.2195103339103,50.3291283396259,69.0113625437784,29.2354962528053,67.1864087454559,67.331098288182,47.1419141204047,60.1350921352067,46.429244339309,71.0226217764021,66.5167130310044,82.5089632612632,98.0687877324607,69.2887542492731,90.0040066059627,55.6215644921877,62.1676781962334,74.6252495512901,88.6420774536442,50.9629216743344,64.7535253581374,46.5040150819244,36.7482308631479,40.7038661167627,59.828328781475,74.1770083476665,53.5583199826525,58.1796611844978,53.9489944646846,57.6646531357118,54.8889588300922,77.2517019118148,40.4496640876542,229.756015921459,59.5541089966671,63.3530544489327,65.888138414565,72.8344159185172,79.225056128076,47.9031628746642,48.0852738454849 | |||
|short_description=p1@SRP68 | |||
}} |
Latest revision as of 13:47, 17 September 2015
Short description: | p1@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRP68_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000304220, ENST00000307877, ENST00000355113, ENST00000539137, ENST00000540937, NM_014230, uc002jqk.1, uc002jql.1, uc010wsu.1_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | E7ETK6Q9UHB9F5H5Y3G3V1U4F5H281B3KMI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.42e-09 | 223 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.72e-23 | 239 |
cancer | 1.13e-22 | 235 |
cell type cancer | 1.16e-20 | 143 |
carcinoma | 1.25e-13 | 106 |
germ cell and embryonal cancer | 9.60e-07 | 22 |
germ cell cancer | 9.60e-07 | 22 |