FFCP PHASE1:Hg19::chr17:63533962..63533988,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:63533962..63533988,- | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr17:63533962..63533988,- | |||
|id=chr17:63533962..63533988,- | |||
|ontology_enrichment_celltype=CL:0002541!1.20e-08!3;CL:0002620!1.31e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.00e-21;3!CL:0002620;6.33e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.15e-21,3;CL:0002620,6.23e-10,23 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.97e-08;1!UBERON:0005425;6.41e-08;1!UBERON:0001045;9.61e-08;1 | |||
|ontology_enrichment_disease=DOID:17!5.72e-08!5;DOID:450!5.72e-08!5;DOID:66!5.72e-08!5;DOID:423!5.72e-08!5;DOID:0080000!5.72e-08!5;DOID:11722!5.72e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.97e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.03e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0002619!6.42e-18!22;UBERON:0000956!2.08e-15!25;UBERON:0000203!2.08e-15!25;UBERON:0001869!4.34e-15!32;UBERON:0001950!1.43e-14!20;UBERON:0002791!1.63e-14!33;UBERON:0002020!5.64e-14!34;UBERON:0003528!5.64e-14!34;UBERON:0001893!5.64e-14!34;UBERON:0002780!1.87e-12!41;UBERON:0001890!1.87e-12!41;UBERON:0006240!1.87e-12!41;UBERON:0001049!2.55e-12!57;UBERON:0005068!2.55e-12!57;UBERON:0006241!2.55e-12!57;UBERON:0007135!2.55e-12!57;UBERON:0003080!4.66e-12!42;UBERON:0007023!8.18e-12!115;UBERON:0002616!1.01e-11!59;UBERON:0000955!4.35e-10!69;UBERON:0006238!4.35e-10!69;UBERON:0003056!4.26e-09!61;UBERON:0003075!4.30e-09!86;UBERON:0007284!4.30e-09!86;UBERON:0000476!1.20e-08!3;UBERON:0000920!1.20e-08!3;UBERON:0001017!1.26e-08!82;UBERON:0002346!1.97e-08!90;UBERON:0005743!5.59e-08!86;UBERON:0000073!1.43e-07!94;UBERON:0001016!1.43e-07!94;UBERON:0002021!1.79e-07!5;UBERON:0000349!1.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.00e-21;3!UBERON:0000920;4.00e-21;3!UBERON:0005631;3.79e-11;10!UBERON:0000158;3.79e-11;10!UBERON:0001282;2.61e-08;1!UBERON:0009842;2.61e-08;1!UBERON:0003704;2.61e-08;1!UBERON:0001171;2.61e-08;1!UBERON:0001172;2.61e-08;1!UBERON:0000941;6.41e-08;1!UBERON:0001785;6.41e-08;1!UBERON:0002464;6.41e-08;1!UBERON:0004904;6.41e-08;1!UBERON:0001021;6.41e-08;1!UBERON:0001154;9.61e-08;1!UBERON:0001153;9.61e-08;1!UBERON:0009854;9.61e-08;1!UBERON:0009856;1.12e-07;4!UBERON:0000478;6.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.15e-21,3;UBERON:0003124,6.97e-16,7;UBERON:0005631,4.45e-12,14;UBERON:0000158,4.45e-12,14;UBERON:0001282,2.52e-08,1;UBERON:0009842,2.52e-08,1;UBERON:0003704,2.52e-08,1;UBERON:0001171,2.52e-08,1;UBERON:0001172,2.52e-08,1;UBERON:0000941,5.79e-08,1;UBERON:0001785,5.79e-08,1;UBERON:0002464,5.79e-08,1;UBERON:0004904,5.79e-08,1;UBERON:0001021,5.79e-08,1;UBERON:0003902,5.79e-08,1;UBERON:0005425,5.79e-08,1;UBERON:0001154,8.69e-08,1;UBERON:0001153,8.69e-08,1;UBERON:0001045,8.69e-08,1;UBERON:0002097,3.53e-07,41;UBERON:0000478,6.02e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,2.05601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0.593146252648242,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0.831192346452549,0,0,0,0,0.179389635688862,0.427114777637135,0,7.50227740211006,7.83199222212136,4.89517026086695,2.79175284497385,0,0,1.26216887122057,0.828449087780694,0,1.77504796258307,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11980435583874,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,15.3433519275463,5.96861211844225,0.296964680832639,0,0,0.140669416410513,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0.110579259931225,0,1.31631238292384,0,0,0,8.88748035606609,181.223228849015,11.040190262402,0,26.7960974174812,1.92354946143911,10.1276607443541,0,0,0,2.03036094555463,3.72518815203705,3.18861015254101,0,0,4.43095935508857,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,11.3391230204257,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,8.69526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0.205116364240755,0,0.207471757392654,0,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,4.7899279887825,0,0,0.475788130837822,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58124514854544,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.946629373159108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,1.33982065078089,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:63533962..63533988,- | |||
}} |
Latest revision as of 19:59, 25 July 2015
Short description: | p@chr17:63533962..63533988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63533962..63533988, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.15e-21 | 3 |
skin fibroblast | 6.23e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.15e-21 | 3 |
chorion | 6.97e-16 | 7 |
extraembryonic membrane | 4.45e-12 | 14 |
membranous layer | 4.45e-12 | 14 |
intralobular bile duct | 2.52e-08 | 1 |
acinus | 2.52e-08 | 1 |
intrahepatic bile duct | 2.52e-08 | 1 |
portal lobule | 2.52e-08 | 1 |
hepatic acinus | 2.52e-08 | 1 |
cranial nerve II | 5.79e-08 | 1 |
cranial nerve | 5.79e-08 | 1 |
nerve trunk | 5.79e-08 | 1 |
nerve connecting eye with brain | 5.79e-08 | 1 |
nerve | 5.79e-08 | 1 |
retinal neural layer | 5.79e-08 | 1 |
presumptive neural retina | 5.79e-08 | 1 |
vermiform appendix | 8.69e-08 | 1 |
caecum | 8.69e-08 | 1 |
midgut | 8.69e-08 | 1 |
skin of body | 3.53e-07 | 41 |
extraembryonic structure | 6.02e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.03e-08 | 8 |