FFCP PHASE1:Hg19::chr8:47529219..47529232,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:47529219..47529232,-
|short_description=p@chr8:47529219..47529232,-
|description=CAGE_peak_at_chr8:47529219..47529232,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:47529219..47529232,- | |||
|coexpression_cluster_id=C4758 | |||
|description=CAGE_peak_at_chr8:47529219..47529232,- | |||
|id=chr8:47529219..47529232,- | |||
|ontology_enrichment_celltype=CL:0000039!1.84e-11!7;CL:0000586!1.84e-11!7;CL:0002579!4.81e-07!3;CL:0002615!8.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.15e-16;7!CL:0000586;3.15e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.01e-16,7;CL:0000586,3.01e-16,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.79e-07;10!UBERON:0005564;2.79e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!6.31e-16!239;DOID:162!8.58e-16!235;DOID:0050687!1.63e-14!143;DOID:3095!7.63e-12!22;DOID:2994!7.63e-12!22;DOID:5409!2.74e-09!4;DOID:305!7.05e-09!106;DOID:0050686!1.36e-08!137;DOID:1325!1.24e-07!7;DOID:3904!1.24e-07!7;DOID:1036!8.35e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.19e-12;22!DOID:2994;6.19e-12;22!DOID:5409;9.19e-11;4!DOID:1909;1.93e-09;2!DOID:1036;9.56e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.32e-14,235;DOID:14566,2.05e-13,239;DOID:3095,6.24e-12,22;DOID:2994,6.24e-12,22;DOID:0050687,8.61e-11,143;DOID:5409,9.05e-11,4;DOID:1909,1.69e-09,2;DOID:1036,9.18e-09,8;DOID:0050686,4.55e-07,137;DOID:305,6.19e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.23e-12!6;UBERON:0002358!3.23e-12!6;UBERON:0003684!3.23e-12!6;UBERON:0001178!3.23e-12!6;UBERON:0004457!1.65e-07!12;UBERON:0000042!1.65e-07!12;UBERON:0000310!3.96e-07!10;UBERON:0000013!4.26e-07!5;UBERON:0002410!4.26e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.48e-11;6!UBERON:0002358;2.48e-11;6!UBERON:0003684;2.48e-11;6!UBERON:0001178;2.48e-11;6!UBERON:0004909;1.69e-09;2!UBERON:0000473;6.79e-09;8!UBERON:0004457;1.39e-07;9!UBERON:0000042;1.39e-07;9!UBERON:0002323;7.73e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.45e-11,6;UBERON:0002358,3.45e-11,6;UBERON:0003684,3.45e-11,6;UBERON:0001178,3.45e-11,6;UBERON:0004909,1.85e-09,2;UBERON:0000473,6.73e-09,8;UBERON:0002323,2.42e-07,46;UBERON:0004458,8.73e-07,49 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.412210116953756,1.28820270022815,1.11670113798954,0,0,0.504867548488229,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82656063769118,1.12264037773229,0.512556597022804,2.04682899626681,1.60853921143608,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,1.81520899825294,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,2.16364542780786,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5941161158127,0,0,0,0,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0,15.7240037068862,18.2145484466567,0.0897576444097721,21.2948848967136,0,0.549585560411174,0,0,0,0,0.676786981851542,1.76456280885966,2.01385904371011,2.65655225813859,0,0.421996129056054,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6612582094301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,1.92381168603681,0,4.39581141080687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99275401470174,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,10.9937867375164,0,0,0,0,0,0,0,0,1.81978941049977,3.42558400253961,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,4.89473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,7.74967408473671,0,0,0,0,10.4873384468994,0.646948868380091,0.157265941855896,5.24206263321667,0,0,2.35477952092104,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,1.88751557356385,0,0,3.4324388592045,0,6.36531910772079,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426067023795788,0,0.4582137370881,0,0,4.3623618401139,0,0,0,0,0,0,2.57333409808316,0,9.27576708065035,0.22589216407792,2.41869136839944,9.66162198826711,0,0,0,0,0,0,0,0,0,0,0,0,1.42843150884526,1.41157948686277,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.655593431782173,0,2.54972074354954,3.20660886318673,0,11.5325468074493,0.0757786982182394,0,0,0,0,0,0,0,5.94298871677251,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,2.23480547213644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.412210116953756,1.28820270022815,1.11670113798954,0,0,0.504867548488229,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.82656063769118,1.12264037773229,0.512556597022804,2.04682899626681,1.60853921143608,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,1.81520899825294,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,2.16364542780786,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5941161158127,0,0,0,0,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0,15.7240037068862,18.2145484466567,0.0897576444097721,21.2948848967136,0,0.549585560411174,0,0,0,0,0.676786981851542,1.76456280885966,2.01385904371011,2.65655225813859,0,0.421996129056054,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6612582094301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,1.92381168603681,0,4.39581141080687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99275401470174,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,10.9937867375164,0,0,0,0,0,0,0,0,1.81978941049977,3.42558400253961,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,4.89473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,7.74967408473671,0,0,0,0,10.4873384468994,0.646948868380091,0.157265941855896,5.24206263321667,0,0,2.35477952092104,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,1.88751557356385,0,0,3.4324388592045,0,6.36531910772079,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426067023795788,0,0.4582137370881,0,0,4.3623618401139,0,0,0,0,0,0,2.57333409808316,0,9.27576708065035,0.22589216407792,2.41869136839944,9.66162198826711,0,0,0,0,0,0,0,0,0,0,0,0,1.42843150884526,1.41157948686277,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.655593431782173,0,2.54972074354954,3.20660886318673,0,11.5325468074493,0.0757786982182394,0,0,0,0,0,0,0,5.94298871677251,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:47529219..47529232,- | |||
}} | }} |
Latest revision as of 18:38, 31 July 2015
Short description: | p@chr8:47529219..47529232, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:47529219..47529232, - |
Coexpression cluster: | C4758_small_neuroblastoma_testicular_endometrial_maxillary_choriocarcinoma_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.01e-16 | 7 |
germ cell | 3.01e-16 | 7 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.45e-11 | 6 |
peritoneum | 3.45e-11 | 6 |
abdominal cavity | 3.45e-11 | 6 |
visceral peritoneum | 3.45e-11 | 6 |
epithelium of gonad | 1.85e-09 | 2 |
testis | 6.73e-09 | 8 |
body cavity | 2.42e-07 | 46 |
body cavity or lining | 8.73e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.32e-14 | 235 |
disease of cellular proliferation | 2.05e-13 | 239 |
germ cell and embryonal cancer | 6.24e-12 | 22 |
germ cell cancer | 6.24e-12 | 22 |
cell type cancer | 8.61e-11 | 143 |
lung small cell carcinoma | 9.05e-11 | 4 |
melanoma | 1.69e-09 | 2 |
chronic leukemia | 9.18e-09 | 8 |
organ system cancer | 4.55e-07 | 137 |
carcinoma | 6.19e-07 | 106 |