FFCP PHASE1:Hg19::chr17:48276936..48276972,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48276936..48276972,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48276936..48276972,- | |||
|id=chr17:48276936..48276972,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-42!180;CL:0000057!4.01e-26!75;CL:0000183!7.19e-14!59;CL:0000680!1.24e-13!57;CL:0000056!1.24e-13!57;CL:0000355!1.24e-13!57;CL:0000187!1.39e-12!54;CL:0000048!1.74e-12!430;CL:0000723!1.30e-11!436;CL:0000393!3.75e-11!60;CL:0000211!3.75e-11!60;CL:0000034!4.58e-11!444;CL:0000192!2.66e-10!42;CL:0000514!2.66e-10!42;CL:0002371!2.28e-09!591;CL:0002334!1.31e-08!12;CL:0000144!1.90e-08!625;CL:0002620!7.16e-08!23;CL:0000499!6.46e-07!27;CL:0000327!7.34e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.47e-10;12!CL:0000134;1.58e-09;55!CL:0000057;1.78e-08;73!CL:0000048;2.05e-08;58!CL:0002569;6.29e-08;6!CL:0000499;9.18e-08;28!CL:0002320;9.37e-08;188!CL:0000723;1.12e-07;61!CL:0002570;3.48e-07;8!CL:0000349;4.98e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.91e-21,76;CL:0000048,7.22e-14,427;CL:0000723,3.19e-13,433;CL:0000034,2.14e-12,441;CL:0002320,2.94e-10,361;CL:0000134,4.97e-10,354;CL:0002334,9.97e-10,12;CL:0000219,2.66e-08,386;CL:0002569,6.46e-08,6;CL:0000499,9.27e-08,28;CL:0002570,2.39e-07,8;CL:0000349,5.41e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.10e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.11e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.67e-16!83;UBERON:0002329!7.67e-16!83;UBERON:0003077!7.67e-16!83;UBERON:0003059!7.67e-16!83;UBERON:0007282!7.67e-16!83;UBERON:0009618!7.67e-16!83;UBERON:0007285!7.67e-16!83;UBERON:0002385!6.40e-15!63;UBERON:0001015!6.40e-15!63;UBERON:0000383!6.40e-15!63;UBERON:0001134!1.31e-14!61;UBERON:0002036!1.31e-14!61;UBERON:0003082!1.31e-14!61;UBERON:0004290!1.34e-13!70;UBERON:0000486!6.63e-11!82;UBERON:0005256!4.87e-10!143;UBERON:0002100!4.91e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;2.82e-09;7!UBERON:0009142;2.82e-09;7!UBERON:0003688;1.08e-08;6!UBERON:0002358;1.08e-08;6!UBERON:0003684;1.08e-08;6!UBERON:0001178;1.08e-08;6!UBERON:0002384;3.29e-08;198!UBERON:0003422;6.29e-08;6!UBERON:0001013;1.78e-07;14!UBERON:0004457;7.29e-07;9!UBERON:0000042;7.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.11e-10,371;UBERON:0003688,1.59e-08,6;UBERON:0002358,1.59e-08,6;UBERON:0003684,1.59e-08,6;UBERON:0001178,1.59e-08,6;UBERON:0003422,6.46e-08,6;UBERON:0001013,1.04e-07,14 | |||
|phase1_expression=3.45188920614058,3.8538094300377,7.89344662937438,2.00146596706261,4.02264984984559,2.61701557230111,12.6649939084155,0,0,0,0,0,2.11013582582763,0.247532705920093,0.994192127183747,0,0.602694528023977,0,0.975865597581014,0.369363174230364,0.612002073732759,5.32873026512749,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.767175371061182,1.0843174571537,5.51471701699479,1.44846518960824,31.811437882044,9.24606253575008,0.567208902984407,1.55210578223795,1.22968699970376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3819061161174,2.65924074495618,0.529636723252875,7.74458876021797,4.965357350777,1.68203280042692,0,2.71334303258876,1.24484414159907,0.67355336034844,0.817309515567294,0.756787138224657,2.88087962239999,0.70296429550139,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,0.368502951935304,0.619954687054593,9.50402285825643,7.91254173691382,2.73048408581408,2.87447256726495,0.673344455816265,0.375355559615893,0.277064115484183,2.19488810440419,2.45190236639216,5.55880817954408,0.340296549480063,3.22901344239952,2.77624605464138,1.90738711043606,2.40072876867522,1.23663035086127,4.89517026086695,1.48893485065272,5.06328996723799,1.36411807225678,2.52433774244115,3.95814564161887,1.61646056818812,3.90510551768276,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,6.173610169971,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,2.07986957055916,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.560655421726804,1.74384027533312,0.36669142910475,3.49033632546,3.57656445851882,1.690605505112,1.32969058292435,2.08014873822732,0.514414748524284,0,2.1313774321288,2.43062589218851,4.88359444852299,2.46972101034231,0.977208552881205,2.48774364119782,2.37585561880029,0,0,0.499864955910285,0,0,0,3.35474797688216,9.18895486672911,0,1.01346914667305,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0,14.3499894456257,13.20374517099,6.62350143142526,3.27995961979597,6.01892199455438,4.5481500811197,1.03473071292505,1.99267679560631,4.97796755062599,0.695068915744663,1.95801157462741,3.0882908142977,0,0,0,0,3.32870879020994,3.62868351995616,6.4508030032882,3.83654933220156,10.6650835884568,8.07276640310916,4.09365799253363,10.4555048743345,2.96836132889982,0.462629081407967,3.01854933032316,0.0821271560138091,2.07701771673448,1.04589340613963,0,0,0,2.18147451512753,1.27463817604702,1.83574180943194,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,2.50844886927427,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.457847324091717,0.165018999841176,1.72279661398852,0,1.6068392984416,0.193341436584244,0.462145851343933,0.921022048356777,0.689182862422653,0.429680979473094,1.0151168573996,1.02271952899321,3.20515328328254,0.165284915360978,0,0,0.2023155617111,0,5.35180989612088,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,0.572499546967965,1.48863347743867,1.89827654831236,4.00323407240032,0.767693373934002,1.28381696410176,1.59101623962968,0,1.43897966066652,2.47083326762449,2.12062324222236,0.202182481573316,0,0,2.92580243453754,1.46228093778771,0,0.545999645631943,4.3835683905651,6.78048699721457,2.2054613741845,0.66343897524122,0,0.578775534266688,3.27947376023316,1.21746226177622,0.92947049429925,1.97186921772569,0.717056761020258,0.589494246078727,1.07001315444375,0.709522128141196,1.05553817648832,0.987884678879706,1.13841952129715,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,5.90975216557434,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,1.00035336054936,0.113942055847001,0,0,0.108647371922008,0,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,0,10.4335094148843,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,3.16373037092745,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,2.57859264851974,0,0.837847203816763,0,0,0.199679000498991,0,0,0.53746777989381,7.20599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0.25426853765475,1.08599920350743,0,0,2.39460383124975,0,1.19271615249795,0,0,0,0,0,0,0,0.213574825135389,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53733164907686,4.67426619694449,1.66441758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| |||
|short_description=p@chr17:48276936..48276972,- | |||
}} |
Latest revision as of 18:39, 25 July 2015
Short description: | p@chr17:48276936..48276972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48276936..48276972, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.91e-21 | 76 |
multi fate stem cell | 7.22e-14 | 427 |
somatic stem cell | 3.19e-13 | 433 |
stem cell | 2.14e-12 | 441 |
connective tissue cell | 2.94e-10 | 361 |
mesenchymal cell | 4.97e-10 | 354 |
preadipocyte | 9.97e-10 | 12 |
motile cell | 2.66e-08 | 386 |
mesenchymal stem cell of umbilical cord | 6.46e-08 | 6 |
stromal cell | 9.27e-08 | 28 |
mesenchymal stem cell of adipose | 2.39e-07 | 8 |
extraembryonic cell | 5.41e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.11e-10 | 371 |
omentum | 1.59e-08 | 6 |
peritoneum | 1.59e-08 | 6 |
abdominal cavity | 1.59e-08 | 6 |
visceral peritoneum | 1.59e-08 | 6 |
mesenchyme of umbilical cord | 6.46e-08 | 6 |
adipose tissue | 1.04e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.18e-07 | 14 |