FFCP PHASE1:Hg19::chr17:4638695..4638723,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:4638695..4638723,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr17:4638695..4638723,- | |||
|id=chr17:4638695..4638723,- | |||
|ontology_enrichment_celltype=CL:0000766!1.79e-46!76;CL:0000557!1.12e-41!71;CL:0002057!1.65e-41!42;CL:0000839!6.32e-39!70;CL:0002009!2.92e-38!65;CL:0000860!1.81e-37!45;CL:0002194!1.95e-36!63;CL:0000576!1.95e-36!63;CL:0000040!1.95e-36!63;CL:0000559!1.95e-36!63;CL:0000763!1.92e-29!112;CL:0000049!1.92e-29!112;CL:0000738!4.17e-24!140;CL:0002031!4.95e-17!124;CL:0002087!7.54e-15!119;CL:0000037!8.89e-15!172;CL:0000566!8.89e-15!172;CL:0002032!2.10e-14!165;CL:0000837!2.10e-14!165;CL:0000988!2.39e-14!182;CL:0002393!2.32e-08!9;CL:0002397!2.32e-08!9;CL:0000094!9.93e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-87;33!CL:0002057;2.04e-87;33!CL:0000473;8.97e-73;39!CL:0000234;8.97e-73;39!CL:0000576;1.87e-53;48!CL:0000766;7.92e-43;69!CL:0000763;2.91e-22;100!CL:0000738;6.73e-15;136!CL:0002087;2.78e-13;104!CL:0000775;3.20e-12;3!CL:0000453;8.74e-12;5!CL:0000094;1.68e-11;8!CL:0000219;2.44e-08;193!CL:0000081;2.85e-08;11!CL:0000988;2.40e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.12e-97,72;CL:0000473,3.44e-92,48;CL:0000234,3.44e-92,48;CL:0000860,3.63e-89,42;CL:0002057,3.63e-89,42;CL:0000557,2.88e-86,67;CL:0000839,2.34e-83,66;CL:0002009,4.84e-82,61;CL:0002194,1.35e-80,59;CL:0000576,1.35e-80,59;CL:0000040,1.35e-80,59;CL:0000559,1.35e-80,59;CL:0000763,2.04e-74,108;CL:0000049,2.04e-74,108;CL:0000738,4.99e-57,136;CL:0002032,1.42e-46,161;CL:0000837,1.42e-46,161;CL:0000037,3.35e-44,168;CL:0002031,3.73e-44,120;CL:0000988,2.01e-41,177;CL:0002087,3.40e-37,115;CL:0000134,2.35e-15,354;CL:0002320,7.59e-15,361;CL:0000219,4.69e-13,386;CL:0000775,2.56e-12,3;CL:0000453,9.81e-12,5;CL:0000094,1.61e-11,8;CL:0000048,7.25e-11,427;CL:0000723,1.45e-10,433;CL:0000034,3.57e-10,441;CL:0000081,2.76e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-63;42!CL:0000049;2.46e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.74e-35!102;UBERON:0003061!6.74e-35!102;UBERON:0002371!2.94e-34!80;UBERON:0002193!3.11e-30!112;UBERON:0001474!3.25e-30!86;UBERON:0002405!5.58e-26!115;UBERON:0004765!1.33e-25!101;UBERON:0001434!1.33e-25!101;UBERON:0000062!1.13e-10!511;UBERON:0003081!3.29e-10!216;UBERON:0007023!1.01e-09!115;UBERON:0002204!2.18e-09!167;UBERON:0002050!5.94e-07!605;UBERON:0005423!5.94e-07!605;UBERON:0000922!9.93e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.95e-75,76;UBERON:0001474,6.79e-69,82;UBERON:0004765,5.71e-62,90;UBERON:0002405,1.12e-59,93;UBERON:0002390,3.72e-59,98;UBERON:0003061,3.72e-59,98;UBERON:0001434,7.42e-55,100;UBERON:0002193,8.25e-53,108;UBERON:0002204,4.90e-29,167;UBERON:0003081,6.14e-25,203;UBERON:0002384,3.74e-14,371;UBERON:0000926,2.15e-13,315;UBERON:0004120,2.15e-13,315;UBERON:0006603,2.15e-13,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.08371286321253,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.434021741431704,2.46307021663917,1.94336199611388,0.77272670290256,9.16008904311258,3.02300754951048,3.63876091781724,11.1565937714729,3.70051099219643,2.78735733805593,11.507695692886,5.12321413058201,2.36482229888585,4.48169384957604,1.93645405075148,2.70852973188684,12.8004790888971,8.46009065179322,2.69668181334102,13.7737751566906,4.17207735198922,4.47535988059329,7.25672860410775,8.97586459297343,3.40979800426155,8.41606792022894,2.8369261234557,2.4912889959823,9.79869794501299,5.21482918420201,3.9093992046921,8.47559303686716,3.31449872388808,0.949387162322653,0.633765858935825,1.27562579979026,0.628975936525128,0.44931452458598,1.35159203557356,0.32145117339416,0.285012743741249,1.39241674039363,0.730656615058536,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0,0.219500570817251,0,0.201057944823262,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.468008530278475,1.18904929830983,0,0,0,0,0,0,0.492663237895943,0.616339038092582,1.24396869324463,1.8735593944205,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,1.50677127429638,10.5416969741516,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,2.99602809578873,14.9580729602012,5.38740167466846,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.604297247958111,0.40101294060657,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.650756789328606,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.847294206991012,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.307801034015188,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.442306057399416,0.300646838828985,0,0,0,0,0,0,0,0.520679215005393,0,0.0870592065804026,0.34945333648406,0.171986032471617,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0.391102765469606,0.400794101257669,0.85381197895741,0,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0.236349546921671,0.247247575143499,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.899895566206002,2.32140586367385,0.0607495566580247,0,0.0788057072991982,0,0,0.537862017998534,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0,0,0,0.732761168390412,0,0.129282956361551,0.13223260174269,0,0,0.640724475406168,0,2.89967338743037,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0.168942440653073,0,0.345430341731199,0,0.553033744606923,3.3126252502696,3.32162100783408,1.79921933681429,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.645902582527404,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0.397901550322736,0,0,0,0,0.463044948647668,1.31135736302374,0,0.245148321753905,0.235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| |||
|short_description=p@chr17:4638695..4638723,- | |||
}} |
Latest revision as of 18:03, 25 July 2015
Short description: | p@chr17:4638695..4638723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4638695..4638723, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.12e-97 | 72 |
defensive cell | 3.44e-92 | 48 |
phagocyte | 3.44e-92 | 48 |
classical monocyte | 3.63e-89 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-89 | 42 |
granulocyte monocyte progenitor cell | 2.88e-86 | 67 |
myeloid lineage restricted progenitor cell | 2.34e-83 | 66 |
macrophage dendritic cell progenitor | 4.84e-82 | 61 |
monopoietic cell | 1.35e-80 | 59 |
monocyte | 1.35e-80 | 59 |
monoblast | 1.35e-80 | 59 |
promonocyte | 1.35e-80 | 59 |
myeloid cell | 2.04e-74 | 108 |
common myeloid progenitor | 2.04e-74 | 108 |
leukocyte | 4.99e-57 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-46 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-46 | 161 |
hematopoietic stem cell | 3.35e-44 | 168 |
hematopoietic lineage restricted progenitor cell | 3.73e-44 | 120 |
hematopoietic cell | 2.01e-41 | 177 |
nongranular leukocyte | 3.40e-37 | 115 |
mesenchymal cell | 2.35e-15 | 354 |
connective tissue cell | 7.59e-15 | 361 |
motile cell | 4.69e-13 | 386 |
neutrophil | 2.56e-12 | 3 |
Langerhans cell | 9.81e-12 | 5 |
granulocyte | 1.61e-11 | 8 |
multi fate stem cell | 7.25e-11 | 427 |
somatic stem cell | 1.45e-10 | 433 |
stem cell | 3.57e-10 | 441 |
blood cell | 2.76e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.95e-75 | 76 |
bone element | 6.79e-69 | 82 |
skeletal element | 5.71e-62 | 90 |
immune system | 1.12e-59 | 93 |
hematopoietic system | 3.72e-59 | 98 |
blood island | 3.72e-59 | 98 |
skeletal system | 7.42e-55 | 100 |
hemolymphoid system | 8.25e-53 | 108 |
musculoskeletal system | 4.90e-29 | 167 |
lateral plate mesoderm | 6.14e-25 | 203 |
connective tissue | 3.74e-14 | 371 |
mesoderm | 2.15e-13 | 315 |
mesoderm-derived structure | 2.15e-13 | 315 |
presumptive mesoderm | 2.15e-13 | 315 |