FFCP PHASE1:Hg19::chr17:46371622..46371665,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000421610_5end | |||
|cluster_id=chr17:46371622..46371665,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_ENST00000421610_5end | |||
|id=chr17:46371622..46371665,+ | |||
|ontology_enrichment_celltype=CL:0000083!1.50e-11!4;CL:0005020!1.19e-07!6;CL:0002138!1.19e-07!6;CL:0005022!1.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000167;6.47e-17;1!CL:0000164;6.47e-17;1!CL:0000502;6.47e-17;1!CL:0000172;6.47e-17;1!CL:0000173;6.47e-17;1!CL:0002553;7.57e-17;1!CL:0000083;2.44e-16;4!CL:0000123;5.08e-09;2!CL:0000242;5.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.47e-17,1;CL:0000164,6.47e-17,1;CL:0000502,6.47e-17,1;CL:0000172,6.47e-17,1;CL:0000173,6.47e-17,1;CL:0002351,6.47e-17,1;CL:0002553,7.57e-17,1;CL:0000083,1.93e-16,4;CL:0000242,5.08e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.17e-31;2!CL:0002351;6.47e-17;1!UBERON:0005754;1.93e-16;1 | |||
|ontology_enrichment_disease=DOID:1793!1.50e-11!4;DOID:4074!3.30e-11!2;DOID:4905!3.30e-11!2;DOID:3498!3.30e-11!2;DOID:4929!2.90e-10!2;DOID:170!7.68e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.37e-31;2!DOID:4905;1.37e-31;2!DOID:3498;1.37e-31;2!DOID:4430;6.47e-17;1!DOID:1793;2.44e-16;4!DOID:170;3.22e-11;6!DOID:1115;1.85e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,8.57e-32,2;DOID:4905,8.57e-32,2;DOID:3498,8.57e-32,2;DOID:4430,6.47e-17,1;DOID:1793,1.93e-16,4;DOID:170,2.76e-11,6;DOID:0050687,7.19e-08,143;DOID:1115,1.94e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0006947!8.76e-16!3;UBERON:0004054!8.76e-16!3;UBERON:0005904!5.90e-12!4;UBERON:0003135!2.78e-07!11;UBERON:0003886!4.90e-07!63;UBERON:0000988!8.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.06e-46;3!UBERON:0004054;3.06e-46;3!UBERON:0005904;6.73e-35;4!UBERON:0001301;4.72e-17;1!UBERON:0001000;1.93e-16;1!UBERON:0000998;1.93e-16;1!UBERON:0006868;1.93e-16;1!UBERON:0005352;1.93e-16;1!UBERON:0000058;2.13e-14;10!UBERON:0003135;3.78e-13;11!UBERON:0004175;3.72e-07;21!UBERON:0001264;4.39e-07;10!UBERON:0003101;7.47e-07;22!UBERON:0000079;7.47e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.06e-46,3;UBERON:0004054,3.06e-46,3;UBERON:0005904,6.73e-35,4;UBERON:0001301,4.72e-17,1;UBERON:0001000,1.65e-16,1;UBERON:0005352,1.65e-16,1;UBERON:0000998,2.25e-16,1;UBERON:0006868,2.25e-16,1;UBERON:0000080,7.76e-16,9;UBERON:0002120,7.76e-16,9;UBERON:0004875,7.76e-16,9;UBERON:0005721,7.76e-16,9;UBERON:0005754,7.76e-16,9;UBERON:0007297,7.76e-16,9;UBERON:0003135,3.79e-13,11;UBERON:0000058,4.08e-13,19;UBERON:0004876,4.47e-13,11;UBERON:0003887,4.87e-12,12;UBERON:0005177,4.50e-09,101;UBERON:0005103,1.31e-08,8;UBERON:0000083,1.31e-08,8;UBERON:0009201,1.31e-08,8;UBERON:0006553,1.31e-08,8;UBERON:0003074,1.31e-08,8;UBERON:0003060,1.31e-08,8;UBERON:0001264,4.01e-07,10;UBERON:0003886,4.25e-07,54;UBERON:0003101,7.47e-07,22;UBERON:0000079,7.47e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,12.1390189767046,1.57833761139756,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,23.23864687619,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0.343609788497747,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87012214878023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,1.13312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,1.3948971044175,0.695433089210318,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,3.47214540203349,0,0,0,0,5.4205605833374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000421610 | |||
}} |
Latest revision as of 18:03, 25 July 2015
Short description: | p1@ENST00000421610 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000421610_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -41bp_to_ENST00000421610_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.47e-17 | 1 |
enteroendocrine cell | 6.47e-17 | 1 |
type D enteroendocrine cell | 6.47e-17 | 1 |
somatostatin secreting cell | 6.47e-17 | 1 |
pancreatic D cell | 6.47e-17 | 1 |
progenitor cell of endocrine pancreas | 6.47e-17 | 1 |
lung fibroblast | 7.57e-17 | 1 |
epithelial cell of pancreas | 1.93e-16 | 4 |
Merkel cell | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.06e-46 | 3 |
internal male genitalia | 3.06e-46 | 3 |
duct of male reproductive system | 6.73e-35 | 4 |
epididymis | 4.72e-17 | 1 |
vas deferens | 1.65e-16 | 1 |
spermatic cord | 1.65e-16 | 1 |
seminal vesicle | 2.25e-16 | 1 |
seminal fluid secreting gland | 2.25e-16 | 1 |
mesonephros | 7.76e-16 | 9 |
pronephros | 7.76e-16 | 9 |
nephrogenic cord | 7.76e-16 | 9 |
pronephric mesoderm | 7.76e-16 | 9 |
rostral part of nephrogenic cord | 7.76e-16 | 9 |
presumptive pronephric mesoderm | 7.76e-16 | 9 |
male reproductive organ | 3.79e-13 | 11 |
duct | 4.08e-13 | 19 |
urogenital ridge | 4.47e-13 | 11 |
intraembryonic coelom | 4.87e-12 | 12 |
trunk region element | 4.50e-09 | 101 |
mesonephric epithelium | 1.31e-08 | 8 |
mesonephric tubule | 1.31e-08 | 8 |
nephric duct | 1.31e-08 | 8 |
renal duct | 1.31e-08 | 8 |
mesonephric duct | 1.31e-08 | 8 |
pronephric duct | 1.31e-08 | 8 |
pancreas | 4.01e-07 | 10 |
body cavity precursor | 4.25e-07 | 54 |
male organism | 7.47e-07 | 22 |
male reproductive system | 7.47e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 8.57e-32 | 2 |
pancreatic carcinoma | 8.57e-32 | 2 |
pancreatic ductal adenocarcinoma | 8.57e-32 | 2 |
somatostatinoma | 6.47e-17 | 1 |
pancreatic cancer | 1.93e-16 | 4 |
endocrine gland cancer | 2.76e-11 | 6 |
cell type cancer | 7.19e-08 | 143 |
sarcoma | 1.94e-07 | 20 |