FFCP PHASE1:Hg19::chr17:41623259..41623278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z5J3 | |||
|association_with_transcript=0bp_to_ENST00000538265_5end | |||
|cluster_id=chr17:41623259..41623278,- | |||
|description=CAGE_peak_7_at_ETV4_5end | |||
|id=chr17:41623259..41623278,- | |||
|ontology_enrichment_celltype=CL:0000066!4.30e-27!254;CL:0002321!7.85e-16!248;CL:0000220!2.91e-15!246;CL:0000223!1.11e-11!59;CL:0002076!1.10e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.96e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.55e-24,253;CL:0000223,3.16e-14,58;CL:0002076,1.46e-10,42;CL:0002321,1.71e-09,250 | |||
|ontology_enrichment_development_v019=UBERON:0009497;7.98e-12;13!UBERON:0004161;6.15e-10;11!UBERON:0001041;4.42e-09;30!CL:0000223;4.45e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.34e-15!106;DOID:0050687!2.27e-14!143;DOID:162!2.55e-12!235;DOID:14566!1.07e-11!239 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.43e-16,106;DOID:0050687,5.13e-15,143;DOID:162,2.07e-10,235;DOID:14566,8.89e-10,239;DOID:3119,9.52e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.72e-13!169;UBERON:0000925!1.72e-13!169;UBERON:0006595!1.72e-13!169;UBERON:0000481!5.72e-13!347;UBERON:0000119!3.00e-12!312;UBERON:0000483!1.08e-11!309;UBERON:0001007!1.15e-11!155;UBERON:0001555!1.15e-11!155;UBERON:0007026!1.15e-11!155;UBERON:0003104!6.00e-11!238;UBERON:0009142!6.00e-11!238;UBERON:0005911!1.98e-09!82;UBERON:0000475!2.20e-09!365;UBERON:0002100!2.28e-09!216;UBERON:0001048!4.58e-09!168;UBERON:0000490!7.23e-09!138;UBERON:0000466!1.50e-08!126;UBERON:0000077!1.77e-08!130;UBERON:0000922!7.51e-08!612;UBERON:0005177!8.14e-08!107;UBERON:0000464!1.55e-07!104;UBERON:0005256!2.56e-07!143;UBERON:0002050!5.99e-07!605;UBERON:0005423!5.99e-07!605;UBERON:0000923!7.28e-07!604;UBERON:0005291!7.28e-07!604;UBERON:0006598!7.28e-07!604;UBERON:0002532!7.28e-07!604;UBERON:0003914!7.31e-07!118;UBERON:0004921!9.15e-07!129;UBERON:0004185!9.15e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;3.92e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.79e-11,160;UBERON:0000925,2.79e-11,160;UBERON:0006595,2.79e-11,160;UBERON:0005911,4.19e-11,82;UBERON:0001007,3.03e-09,145;UBERON:0001555,3.03e-09,145;UBERON:0007026,3.03e-09,145;UBERON:0003929,9.19e-09,54;UBERON:0005177,9.19e-09,101;UBERON:0002100,1.47e-07,199;UBERON:0000949,3.28e-07,45;UBERON:0000344,3.63e-07,20;UBERON:0000119,9.57e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.982935746006035,0.697801167972428,1.31064823278103,1.05506791291381,0,0,0,1.20538905604795,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0.85870796139317,0.547497700291537,1.00434111675842,0.840547463227464,0.656804715599566,0.865818594450472,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0,0,0.661743720148475,0.886917589850256,0.702678285545008,0.261958150995425,4.73583874780305,1.11235332835329,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0.56530794192401,1.25849830862972,1.10047216776027,0.626984899610432,0.516833518338658,0,0,0,0,0,0,1.62028389576352,0.625098097988558,0.22452937262617,1.35133776579987,0,0.949265659568129,1.83201743930407,0,0,1.74437620857014,0,0.25326102332916,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.538842688278752,0.653847612453835,0.151357427644931,0.576175924479999,1.87457145467037,0.624320153660641,1.71141546463335,0.747243402759005,0.822041490506354,0.647491777472526,0.280901613404497,1.83738754129404,1.96534907698829,1.03325781175765,0,1.23633464639278,0,0.718618141816238,2.52504170931099,2.37725187756732,1.10825646193673,0,0,1.65261864797256,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,3.28543450377605,1.09098448236334,7.7437240755031,2.07355300420312,0.927708378250397,0.929551542956147,1.0366105501537,1.26160425437814,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0.474541238222193,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,5.411491295897,0.171567810298526,8.45077197646417,4.49607013030478,3.61904300681871,4.62942225792648,0.977424915930974,0,0,0.695582429850461,0.469634776943287,0.288732895522148,1.38895653772983,0,0,0,0,0,0,0.93733833986777,0.839910640994298,2.26840155587818,1.34337784054272,2.03443756959773,6.13412286664338,0,0,0,0,0.12624243342638,0.126995788584338,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0.448524337381443,1.30788020649984,1.0267360014933,0.646358578788889,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.799783929456456,0,0,0,0,0,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,3.30323011489202,0,0,0.837581326671744,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.60818530127658,0.391602314925481,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.925258162815933,0.710246901252508,0.657017248110473,0,0.232420756919918,5.80125358039787,1.60405176242628,3.68323955743585,0.574072240823034,0.546273504020151,0.262248829918848,1.80479845162965,0.770153371044148,1.56869953835371,1.46139224653261,1.26661954671451,0,0,0.215915916102139,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.671624264166535,0,0,1.02580050046556,0.328014645699706,0.325378394664303,1.23649213977267,0,0,9.76251414593493,3.25030123018261,0,0.870036464629098,0,0.15350367472613,0.137836572484531,0,0.290033387828457,1.02271952899321,0.178064071293475,0.826424576804891,2.88285101047659,1.14851441245126,1.4162089319777,0,0,0.6970372701606,2.15623506123262,0.532306030317022,0,1.8532421910392,0,0,0,0.190630193923825,1.79128453917934,0.42793898803392,0.95460974377781,0.78494864019923,0,0.274537029736055,0.471249609382746,1.2130948894399,1.58510321173008,0.421258456238981,0.975267478179181,1.46228093778771,3.16950440270266,0.136499911407986,0.282810863907425,2.26016233240486,2.2054613741845,0,0.876901770507525,2.89387767133344,0.655894752046633,1.01455188481352,1.8589409885985,0.281695602532241,0.143411352204052,0.294747123039363,2.49669736036875,0.709522128141196,0,0,1.51789269506286,8.04849856563461,2.69421915631434,6.70302275535787,2.17781969722645,0.659006605437454,2.15252686335615,0,2.66058092122005,1.37834040124176,0,0,0,0,0,0,0,0,0.961416640147258,6.73735898684351,0.980160863924127,1.11481905075431,0,0,0,0.399158742865633,0,3.17510374085824,0,0,0,2.35019843659535,0,0.338583555603207,0.481764225311099,0,1.27753871307098,2.40453741329035,0.614481528616916,0.447352215784832,0.834245708559542,0.390776190804081,0.835218521685727,0,0.811367035427949,0,0,6.36277837387947,0,2.06312886974173,0.111443384277478,2.84136146806413,0,0,0,0,0,4.56365690593914,0,0.211125408127993,0.796991953004279,0,0.755798243562828,1.43176155503017,0.246169610922139,0.311039587661807,1.88723537409386,7.8769316857268,0.511572370226872,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,0.874599999961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| |||
|short_description=p7@ETV4 | |||
}} |
Latest revision as of 18:31, 24 September 2015
Short description: | p7@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ETV4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538265_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | B7Z5J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.55e-24 | 253 |
endodermal cell | 3.16e-14 | 58 |
endo-epithelial cell | 1.46e-10 | 42 |
embryonic cell | 1.71e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.79e-11 | 160 |
endoderm | 2.79e-11 | 160 |
presumptive endoderm | 2.79e-11 | 160 |
endo-epithelium | 4.19e-11 | 82 |
digestive system | 3.03e-09 | 145 |
digestive tract | 3.03e-09 | 145 |
primitive gut | 3.03e-09 | 145 |
gut epithelium | 9.19e-09 | 54 |
trunk region element | 9.19e-09 | 101 |
trunk | 1.47e-07 | 199 |
endocrine system | 3.28e-07 | 45 |
mucosa | 3.63e-07 | 20 |
cell layer | 9.57e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.43e-16 | 106 |
cell type cancer | 5.13e-15 | 143 |
cancer | 2.07e-10 | 235 |
disease of cellular proliferation | 8.89e-10 | 239 |
gastrointestinal system cancer | 9.52e-08 | 14 |