FFCP PHASE1:Hg19::chr17:39974415..39974450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:39974415..39974450,+ | |||
|coexpression_cluster_id=C1227 | |||
|description=CAGE_peak_at_chr17:39974415..39974450,+ | |||
|id=chr17:39974415..39974450,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.32e-42!180;CL:0000183!2.23e-18!59;CL:0000057!1.11e-17!75;CL:0000187!1.33e-16!54;CL:0000393!3.01e-16!60;CL:0000211!3.01e-16!60;CL:0000680!6.17e-16!57;CL:0000056!6.17e-16!57;CL:0000355!6.17e-16!57;CL:0000192!1.89e-14!42;CL:0000514!1.89e-14!42;CL:0002321!6.17e-14!248;CL:0000220!8.33e-14!246;CL:0000222!3.19e-13!119;CL:0000359!2.27e-12!32;CL:0000548!1.40e-11!679;CL:0000004!1.40e-11!679;CL:0000255!1.40e-11!679;CL:0000012!5.15e-11!682;CL:0002371!5.45e-11!591;CL:0000144!1.35e-10!625;CL:0002334!5.81e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.45e-11;32!CL:0000192;1.97e-08;43!CL:0002334;6.52e-08;12!CL:0000393;7.75e-07;61!CL:0000211;7.75e-07;61!CL:0002595;8.19e-07;5!CL:0002494;9.20e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.64e-13,76;CL:0000187,1.40e-12,55;CL:0000680,3.87e-12,58;CL:0000056,3.87e-12,58;CL:0000355,3.87e-12,58;CL:0000192,4.30e-12,43;CL:0000514,4.30e-12,43;CL:0000359,5.77e-12,32;CL:0000393,5.93e-12,61;CL:0000211,5.93e-12,61;CL:0000048,2.43e-11,427;CL:0000723,1.05e-10,433;CL:0000034,6.83e-10,441;CL:0000222,5.53e-09,121;CL:0002334,5.30e-08,12;CL:0002595,6.25e-07,5;CL:0002494,6.67e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.97e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.73e-16!83;UBERON:0002329!1.73e-16!83;UBERON:0003077!1.73e-16!83;UBERON:0003059!1.73e-16!83;UBERON:0007282!1.73e-16!83;UBERON:0009618!1.73e-16!83;UBERON:0007285!1.73e-16!83;UBERON:0004290!7.89e-16!70;UBERON:0004872!5.44e-15!84;UBERON:0005256!1.57e-14!143;UBERON:0001134!4.21e-14!61;UBERON:0002036!4.21e-14!61;UBERON:0003082!4.21e-14!61;UBERON:0000486!9.03e-14!82;UBERON:0001637!2.47e-13!42;UBERON:0003509!2.47e-13!42;UBERON:0004572!2.47e-13!42;UBERON:0002385!2.51e-13!63;UBERON:0001015!2.51e-13!63;UBERON:0000383!2.51e-13!63;UBERON:0001981!2.73e-13!60;UBERON:0007500!2.73e-13!60;UBERON:0004537!2.73e-13!60;UBERON:0006965!2.73e-13!60;UBERON:0002049!5.21e-13!79;UBERON:0007798!5.21e-13!79;UBERON:0000055!1.52e-11!69;UBERON:0003914!3.30e-11!118;UBERON:0004573!5.28e-11!33;UBERON:0004571!5.28e-11!33;UBERON:0000490!5.81e-11!138;UBERON:0002100!8.52e-11!216;UBERON:0004535!2.33e-09!110;UBERON:0001009!9.93e-09!113;UBERON:0003104!1.39e-08!238;UBERON:0009142!1.39e-08!238;UBERON:0003102!4.37e-08!95;UBERON:0000475!6.21e-08!365;UBERON:0002199!2.30e-07!45;UBERON:0002416!2.30e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.49e-12;33!UBERON:0004571;1.49e-12;33!UBERON:0001637;5.25e-10;42!UBERON:0003509;5.25e-10;42!UBERON:0004572;5.25e-10;42!UBERON:0003834;8.19e-07;5!UBERON:0001533;8.19e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.40e-14,33;UBERON:0004571,3.40e-14,33;UBERON:0001637,6.50e-14,42;UBERON:0003509,6.50e-14,42;UBERON:0004572,6.50e-14,42;UBERON:0004872,2.83e-13,83;UBERON:0007503,7.59e-13,78;UBERON:0007524,2.27e-12,73;UBERON:0002329,4.84e-12,71;UBERON:0003059,4.84e-12,71;UBERON:0007282,4.84e-12,71;UBERON:0004290,4.84e-12,71;UBERON:0009618,4.84e-12,71;UBERON:0003077,1.04e-11,72;UBERON:0007285,1.04e-11,72;UBERON:0005256,3.97e-11,122;UBERON:0007500,1.01e-10,59;UBERON:0001981,1.01e-10,59;UBERON:0004537,1.01e-10,59;UBERON:0006965,1.01e-10,59;UBERON:0001134,1.09e-10,62;UBERON:0002036,1.09e-10,62;UBERON:0003082,1.09e-10,62;UBERON:0000486,2.40e-10,83;UBERON:0002199,2.86e-10,46;UBERON:0002416,2.86e-10,46;UBERON:0003104,3.25e-10,160;UBERON:0009142,3.25e-10,160;UBERON:0002385,4.84e-10,64;UBERON:0001015,4.84e-10,64;UBERON:0000383,4.84e-10,64;UBERON:0003914,3.87e-09,117;UBERON:0000055,6.95e-09,68;UBERON:0002049,1.98e-08,78;UBERON:0007798,1.98e-08,78;UBERON:0000490,2.06e-08,148;UBERON:0004535,1.13e-07,109;UBERON:0000926,1.42e-07,315;UBERON:0004120,1.42e-07,315;UBERON:0006603,1.42e-07,315;UBERON:0001009,3.69e-07,112;UBERON:0002097,4.90e-07,41;UBERON:0003102,5.16e-07,99;UBERON:0003834,6.25e-07,5;UBERON:0001533,6.25e-07,5 | |||
|phase1_expression=2.54349730978779,3.21150785836475,1.12763523276777,0,4.02264984984559,5.23403114460221,5.06599756336621,6.94891860769514,1.56711376919903,0,1.39560233594486,0,0.791300934685361,1.36142988256051,1.32558950291166,4.03395087871065,3.01347264011988,1.46062018077475,2.92759679274304,0.61560529038394,2.04000691244253,1.88072832886853,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.767175371061182,0.722878304769133,2.50668955317945,3.0417768981773,0.795285947051099,6.8128881842369,0.283604451492204,0.665188192387692,1.22968699970376,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,1.13061588384802,0.838998872419812,1.92582629358047,0.417989933073621,0,0,0,1.20848795132744,2.28081631715554,2.4406205754817,0,4.0507097394088,0.446498641420399,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,6.46063537203914,3.29239330327907,0.397227542439656,8.03142538096678,1.41867352879343,1.68203280042692,0,4.68668341992604,0.933633106199299,2.42479209725439,1.79808093424805,1.66493170409425,2.88087962239999,0.70296429550139,3.43376084513353,0,1.19558944441441,0.117434498643765,0.809364721840658,0.702254033511242,0.61246251376468,0.737005903870608,0.929932030581889,5.94001428641027,6.42894016124248,0.910161361938026,3.59309070908119,0,0.875829639103749,0.554128230968366,0.438977620880838,3.37136575378922,4.35690370829131,0.680593098960126,1.79389635688862,2.13557388818567,0.847727604638247,2.10063767259082,1.44273540933814,1.28820270022815,2.23340227597908,0.506328996723799,1.65642908774038,0.504867548488229,1.84099797284599,2.7479829659198,1.77504796258307,1.10827308050404,0,0,0.818238361772504,0,0.487894824518382,0.265059536642971,0.69716365721711,0.932949495138334,0.504641701751257,0,1.56449532329816,6.43240938192885,1.38134921352481,2.3218396401599,4.33127689001751,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0.738155454624648,4.20725321410337,1.2347220339942,2.94017422771084,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0,0.370353780634118,0.325808305310325,0,1.44331342025273,0.463721619900307,0.587043471179108,0.577465791044295,0,0.570762456703795,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0.253991577168676,4.58386110669933,1.17217447210047,1.71072446022705,1.23392991243988,0.901029173531752,0.857479297891735,0.336393253036082,1.30788020649984,0.1466765716419,0.775630294546667,7.15312891703765,0,1.86156681609409,1.04007436911366,0.514414748524284,1.41849132023278,1.0656887160644,1.42977993658148,4.34097284313154,0.823240336780769,0.325736184293735,1.06617584622764,1.58390374586686,1.80863626235752,0,1.29964888536674,0,0,0,0.958499421966331,0,0,0.144781306667579,1.02738161275192,0,0,0,0,0,1.27047312111232,1.30139853857622,0.773288812777695,0,0,0,0,0,1.8403723757871,5.50187573165645,1.35632511849868,1.87173775377726,2.14114786556594,1.10391690523754,1.40569697991256,2.40756879782175,29.562975527278,6.2083842775503,1.32845119707087,1.10621501125022,2.17209036170207,2.34961388955289,2.74514739048685,0,0,0,0.303127571446259,3.32870879020994,1.20956117331872,2.97729369382532,0.920771839728375,4.77122160536225,1.02511319404561,0.511707249066704,1.93024705372329,4.45254199334973,2.15893571323718,6.21466038595945,1.39616165223476,4.67328986265259,2.44041794765914,0.966875596732978,3.40860999515584,0.736647911487171,1.83703117063371,2.54927635209404,6.16284750309293,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,0.850468526382578,0.863663664408557,3.08454505380579,1.08378575017541,1.00337954770971,0,0,0.895499018888713,0,0,0,1.96808787419823,0,0.103041011647722,0.640986253728404,0.082509499920588,0,1.30012049207304,3.21367859688319,1.25671933779759,1.23238893691716,0.921022048356777,0.413509717453592,0.751941714077915,2.46528379654188,0.681813019328807,1.15741646340759,1.4875642382488,1.15314040419064,0,0.708104465988849,0,12.9073062200562,1.3940745403212,0.924100740528266,3.72614221221915,1.73986598415015,3.89180860118232,3.00562262158182,0.744316738719335,0.316379424718726,0.762520775695299,0.255897791311334,0,0.636406495851874,2.35484592059769,0.359744915166629,3.56898138656871,1.06031162111118,1.2130948894399,1.58510321173008,2.52755073743389,0.48763373908959,6.09283724078211,7.39551027297288,1.9109987597118,6.92886616573193,2.26016233240486,1.65409603063837,7.29782872765342,5.69986150829892,1.73632660280006,0.655894752046633,1.62328301570163,0.6196469961995,0.845086807596724,0.143411352204052,0.392996164052485,2.49669736036875,0.354761064070598,5.2776908824416,4.28083360847872,0.379473173765715,0,0.192444225451024,0.670302275535787,0,0.4707190038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| |||
|short_description=p@chr17:39974415..39974450,+ | |||
}} |
Latest revision as of 16:51, 25 July 2015
Short description: | p@chr17:39974415..39974450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39974415..39974450, + |
Coexpression cluster: | C1227_Osteoblast_Smooth_tenocyte_Fibroblast_Chondrocyte_Aortic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.64e-13 | 76 |
muscle cell | 1.40e-12 | 55 |
muscle precursor cell | 3.87e-12 | 58 |
myoblast | 3.87e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.87e-12 | 58 |
smooth muscle cell | 4.30e-12 | 43 |
smooth muscle myoblast | 4.30e-12 | 43 |
vascular associated smooth muscle cell | 5.77e-12 | 32 |
electrically responsive cell | 5.93e-12 | 61 |
electrically active cell | 5.93e-12 | 61 |
multi fate stem cell | 2.43e-11 | 427 |
somatic stem cell | 1.05e-10 | 433 |
stem cell | 6.83e-10 | 441 |
mesodermal cell | 5.53e-09 | 121 |
preadipocyte | 5.30e-08 | 12 |
smooth muscle cell of the subclavian artery | 6.25e-07 | 5 |
cardiocyte | 6.67e-07 | 16 |