FFCP PHASE1:Hg19::chr17:20107643..20107658,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30615 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002gww.2_5end | |||
|cluster_id=chr17:20107643..20107658,+ | |||
|description=CAGE_peak_7_at_SPECC1_5end | |||
|id=chr17:20107643..20107658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.56e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-11!115;UBERON:0005743!8.86e-11!86;UBERON:0001049!2.00e-10!57;UBERON:0005068!2.00e-10!57;UBERON:0006241!2.00e-10!57;UBERON:0007135!2.00e-10!57;UBERON:0001017!6.57e-10!82;UBERON:0000073!6.89e-09!94;UBERON:0001016!6.89e-09!94;UBERON:0002616!1.25e-07!59;UBERON:0001737!1.64e-07!9;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0000955!1.96e-07!69;UBERON:0006238!1.96e-07!69;UBERON:0003080!2.26e-07!42;UBERON:0002780!5.46e-07!41;UBERON:0001890!5.46e-07!41;UBERON:0006240!5.46e-07!41;UBERON:0002020!5.96e-07!34;UBERON:0003528!5.96e-07!34;UBERON:0002346!7.51e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.59e-23;9!UBERON:0001557;2.59e-23;9!UBERON:0000178;2.95e-08;15!UBERON:0000179;2.95e-08;15!UBERON:0000463;2.95e-08;15!UBERON:0001875;9.00e-08;2!UBERON:0006514;9.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-23,9;UBERON:0001557,1.63e-10,19;UBERON:0000178,3.18e-08,15;UBERON:0000179,3.18e-08,15;UBERON:0000463,3.18e-08,15;UBERON:0001875,1.63e-07,2;UBERON:0006514,1.63e-07,2;UBERON:0001049,2.36e-07,56;UBERON:0005068,2.36e-07,56;UBERON:0006241,2.36e-07,56;UBERON:0007135,2.36e-07,56;UBERON:0002021,8.48e-07,5 | |||
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| |||
|short_description=p7@SPECC1 | |||
}} |
Latest revision as of 01:07, 19 September 2015
Short description: | p7@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPECC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002gww.2_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.00e-23 | 9 |
upper respiratory tract | 1.63e-10 | 19 |
blood | 3.18e-08 | 15 |
haemolymphatic fluid | 3.18e-08 | 15 |
organism substance | 3.18e-08 | 15 |
globus pallidus | 1.63e-07 | 2 |
pallidum | 1.63e-07 | 2 |
neural tube | 2.36e-07 | 56 |
neural rod | 2.36e-07 | 56 |
future spinal cord | 2.36e-07 | 56 |
neural keel | 2.36e-07 | 56 |
occipital lobe | 8.48e-07 | 5 |