FFCP PHASE1:Hg19::chr17:15164055..15164061,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5376 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9118 | |||
|TSSclassifier=strong | |||
|UniProt=Q01453,Q6FH25 | |||
|association_with_transcript=31bp_to_NM_153322,uc002goj.2_5end | |||
|cluster_id=chr17:15164055..15164061,- | |||
|description=CAGE_peak_8_at_PMP22_5end | |||
|id=chr17:15164055..15164061,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.67e-09,66;CL:0000557,6.86e-09,67;CL:0002619,2.57e-08,3;CL:0000766,4.01e-08,72;CL:0002194,3.48e-07,59;CL:0000576,3.48e-07,59;CL:0000040,3.48e-07,59;CL:0000559,3.48e-07,59;CL:0002009,6.75e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.70e-08;3!UBERON:0003057;2.70e-08;3!UBERON:0000358;5.11e-07;1!UBERON:0005425;5.11e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.02e-08;3!DOID:127;6.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.44e-08,3;DOID:127,5.44e-08,3;DOID:3371,8.49e-07,1;DOID:4549,8.49e-07,1;DOID:5861,8.49e-07,1;DOID:6496,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-13!115;UBERON:0000062!2.92e-11!511;UBERON:0002616!3.42e-11!59;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0001049!1.36e-10!57;UBERON:0005068!1.36e-10!57;UBERON:0006241!1.36e-10!57;UBERON:0007135!1.36e-10!57;UBERON:0005743!1.61e-10!86;UBERON:0001017!2.12e-10!82;UBERON:0003075!3.48e-09!86;UBERON:0007284!3.48e-09!86;UBERON:0000073!8.05e-09!94;UBERON:0001016!8.05e-09!94;UBERON:0002346!1.29e-08!90;UBERON:0000468!1.90e-08!659;UBERON:0000467!3.41e-07!625;UBERON:0000480!4.30e-07!626;UBERON:0002298!4.39e-07!8;UBERON:0003080!4.40e-07!42;UBERON:0000153!4.49e-07!129;UBERON:0007811!4.49e-07!129;UBERON:0001893!5.14e-07!34;UBERON:0000033!6.18e-07!123;UBERON:0002020!6.45e-07!34;UBERON:0003528!6.45e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;6.27e-12;2!UBERON:0000122;6.27e-12;2!UBERON:0002240;2.70e-08;3!UBERON:0005174;2.70e-08;3!UBERON:0001137;2.70e-08;3!UBERON:0000941;5.11e-07;1!UBERON:0001785;5.11e-07;1!UBERON:0002464;5.11e-07;1!UBERON:0004904;5.11e-07;1!UBERON:0001021;5.11e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.42e-12,2;UBERON:0000122,2.42e-12,2;UBERON:0002240,1.72e-08,3;UBERON:0005174,1.72e-08,3;UBERON:0001137,1.72e-08,3;UBERON:0001474,3.38e-08,82;UBERON:0002371,1.39e-07,76;UBERON:0004765,2.96e-07,90;UBERON:0000941,4.33e-07,1;UBERON:0001785,4.33e-07,1;UBERON:0002464,4.33e-07,1;UBERON:0004904,4.33e-07,1;UBERON:0001021,4.33e-07,1;UBERON:0003902,4.33e-07,1;UBERON:0005425,4.33e-07,1;UBERON:0002336,6.43e-07,1;UBERON:0011215,6.43e-07,1;UBERON:0001018,6.43e-07,1;UBERON:0002473,6.43e-07,1;UBERON:0005340,6.43e-07,1;UBERON:0003544,6.43e-07,1;UBERON:0005970,6.43e-07,1;UBERON:0002316,6.43e-07,1;UBERON:0001020,6.43e-07,1;UBERON:0002437,6.43e-07,1;UBERON:0002038,9.48e-07,1;UBERON:0009661,9.48e-07,1;UBERON:0002950,9.48e-07,1;UBERON:0001891,9.48e-07,1;UBERON:0009616,9.48e-07,1;UBERON:0010286,9.48e-07,1 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,0,0,0,0,1.26343974685366,0.783556884599516,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,1.56740831967947,0,2.31818010870768,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0.768482119587302,0.709446689665756,0,0,1.35426486594342,0.188242339542605,1.36453075028923,1.34834090667051,0.306083892370903,2.56743221660875,1.27867425159808,0.329851300186716,0.797854630486527,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,1.08594422352558,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.226864366320042,0,0.640672166455702,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0.445893486866185,0,0,0,0,0,0,0.985326475791887,0.792435906119034,0.207328115540772,1.15295962733569,1.00993946741104,0.190493682876507,0,0,0,0.308482478109971,0,0.285826432630578,0.672786506072164,0,0.36669142910475,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,1.62786481617433,0,0,0.355391948742546,0,0,0,0.099972991182057,0,2.00902836572851,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0.128343036279748,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0.473107245101804,0,0.902838299183157,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0.512556597022804,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,1.06461206063404,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,1.58696134274089,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.642352300414798,0,0,0,0,0,0,0,0.556812347790485,0,1.35227839237992,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0.789147245095469,0,0,1.93866549219044,0.463840490809256,0,0.260427761085233,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.461701551022782,0.227884111694002,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,2.38404868470568,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0,1.95463285643963,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.758238955541855,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0.0967563312890851,0,0,0.290967049465258,1.588610280447,0.677942222341597,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.313808538937,0.101998217636322,0,0,0.684526894459965,0,0,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,0,0,0,1.08599920350743,1.72844298240254,0,1.19730191562487,0.738832686744051,0,0.113312091520126,0,0,0.517131825446202,0.66116300871345,0.171086837884329,0,0.213574825135389,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.7520696820681,0.919036730290385,0.327872630709804,0,0,0.488105059607853,0,0.573409195690071,0.776503360757966,1.17983165588629,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0.813741466409323,0.181848659202559,0.107410557042488,0,0.39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| |||
|short_description=p8@PMP22 | |||
}} |
Latest revision as of 18:16, 18 September 2015
Short description: | p8@PMP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PMP22_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_153322, uc002goj.2_5end |
EntrezGene: | PMP22 |
HGNC: | 9118 |
UniProt: | Q01453Q6FH25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.67e-09 | 66 |
granulocyte monocyte progenitor cell | 6.86e-09 | 67 |
adult endothelial progenitor cell | 2.57e-08 | 3 |
myeloid leukocyte | 4.01e-08 | 72 |
monopoietic cell | 3.48e-07 | 59 |
monocyte | 3.48e-07 | 59 |
monoblast | 3.48e-07 | 59 |
promonocyte | 3.48e-07 | 59 |
macrophage dendritic cell progenitor | 6.75e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 2.42e-12 | 2 |
neuron projection bundle | 2.42e-12 | 2 |
spinal cord | 1.72e-08 | 3 |
dorsal region element | 1.72e-08 | 3 |
dorsum | 1.72e-08 | 3 |
bone element | 3.38e-08 | 82 |
bone marrow | 1.39e-07 | 76 |
skeletal element | 2.96e-07 | 90 |
cranial nerve II | 4.33e-07 | 1 |
cranial nerve | 4.33e-07 | 1 |
nerve trunk | 4.33e-07 | 1 |
nerve connecting eye with brain | 4.33e-07 | 1 |
nerve | 4.33e-07 | 1 |
retinal neural layer | 4.33e-07 | 1 |
presumptive neural retina | 4.33e-07 | 1 |
corpus callosum | 6.43e-07 | 1 |
central nervous system cell part cluster | 6.43e-07 | 1 |
axon tract | 6.43e-07 | 1 |
intercerebral commissure | 6.43e-07 | 1 |
dorsal telencephalic commissure | 6.43e-07 | 1 |
brain white matter | 6.43e-07 | 1 |
brain commissure | 6.43e-07 | 1 |
white matter | 6.43e-07 | 1 |
nervous system commissure | 6.43e-07 | 1 |
cerebral hemisphere white matter | 6.43e-07 | 1 |
substantia nigra | 9.48e-07 | 1 |
midbrain nucleus | 9.48e-07 | 1 |
regional part of midbrain | 9.48e-07 | 1 |
midbrain | 9.48e-07 | 1 |
presumptive midbrain | 9.48e-07 | 1 |
midbrain neural tube | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.44e-08 | 3 |
leiomyoma | 5.44e-08 | 3 |
chondrosarcoma | 8.49e-07 | 1 |
extraosseous chondrosarcoma | 8.49e-07 | 1 |
myxoid chondrosarcoma | 8.49e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 8.49e-07 | 1 |