FFCP PHASE1:Hg19::chr8:37824101..37824132,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:37824101..37824132,-
|short_description=p1@ADRB3
|description=CAGE_peak_1_at_ADRB3_5end
|association_with_transcript=51bp_to_NM_000025,uc003xkr.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=155 | |EntrezGene=155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=288 | |HGNC=288 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAG8,P13945 | |UniProt=A8KAG8,P13945 | ||
|association_with_transcript=51bp_to_NM_000025,uc003xkr.1_5end | |||
|cluster_id=chr8:37824101..37824132,- | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_1_at_ADRB3_5end | |||
|id=chr8:37824101..37824132,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.06e-09;3!CL:0000136;4.93e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.72e-10,3;CL:0000136,5.69e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.10e-08;1!UBERON:0000358;6.74e-08;1!UBERON:0009143;1.26e-07;1!UBERON:0001045;1.26e-07;1!UBERON:0003124;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-29!115;UBERON:0002619!2.33e-19!22;UBERON:0001950!1.10e-18!20;UBERON:0001869!3.14e-18!32;UBERON:0001893!6.49e-17!34;UBERON:0002020!7.99e-17!34;UBERON:0003528!7.99e-17!34;UBERON:0000956!1.12e-16!25;UBERON:0000203!1.12e-16!25;UBERON:0002791!1.69e-15!33;UBERON:0001049!1.22e-14!57;UBERON:0005068!1.22e-14!57;UBERON:0006241!1.22e-14!57;UBERON:0007135!1.22e-14!57;UBERON:0002346!2.36e-13!90;UBERON:0002780!2.59e-13!41;UBERON:0001890!2.59e-13!41;UBERON:0006240!2.59e-13!41;UBERON:0003080!6.76e-13!42;UBERON:0002616!1.69e-12!59;UBERON:0000073!7.53e-12!94;UBERON:0001016!7.53e-12!94;UBERON:0005743!1.96e-11!86;UBERON:0001017!2.96e-11!82;UBERON:0000955!9.19e-11!69;UBERON:0006238!9.19e-11!69;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0001871!4.07e-10!7;UBERON:0000200!2.93e-09!6;UBERON:0003056!1.42e-08!61;UBERON:0001872!9.09e-08!5;UBERON:0002771!3.36e-07!3;UBERON:0000924!6.58e-07!173;UBERON:0006601!6.58e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.79e-15;4!UBERON:0005409;1.63e-09;22!UBERON:0000160;1.10e-08;17!UBERON:0004921;1.83e-08;33!UBERON:0000077;3.62e-08;27!UBERON:0007029;4.82e-08;1!UBERON:0002346;7.98e-08;4!UBERON:0000923;7.98e-08;4!UBERON:0010316;7.98e-08;4!UBERON:0005291;7.98e-08;4!UBERON:0001154;1.26e-07;1!UBERON:0000996;1.26e-07;1!UBERON:0001153;1.26e-07;1!UBERON:0009854;1.26e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,2.57e-15,4;UBERON:0004340,2.57e-15,4;UBERON:0003124,5.73e-09,7;UBERON:0000160,1.13e-08,17;UBERON:0001046,1.78e-08,19;UBERON:0005409,2.45e-08,25;UBERON:0007029,4.99e-08,1;UBERON:0001154,7.97e-08,1;UBERON:0001153,7.97e-08,1;UBERON:0001045,7.97e-08,1;UBERON:0000996,1.26e-07,1;UBERON:0000077,1.30e-07,29;UBERON:0003975,4.09e-07,22;UBERON:0007023,4.24e-07,114 | |||
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| ||
|short_description=p1@ADRB3 | |||
}} | }} |
Latest revision as of 02:44, 18 September 2015
Short description: | p1@ADRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADRB3_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | 51bp_to_NM_000025, uc003xkr.1_5end |
EntrezGene: | ADRB3 |
HGNC: | 288 |
UniProt: | A8KAG8P13945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.72e-10 | 3 |
fat cell | 5.69e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
placenta | 2.57e-15 | 4 |
allantois | 2.57e-15 | 4 |
chorion | 5.73e-09 | 7 |
intestine | 1.13e-08 | 17 |
hindgut | 1.78e-08 | 19 |
gastrointestinal system | 2.45e-08 | 25 |
surface | 4.99e-08 | 1 |
vermiform appendix | 7.97e-08 | 1 |
caecum | 7.97e-08 | 1 |
midgut | 7.97e-08 | 1 |
vagina | 1.26e-07 | 1 |
mixed endoderm/mesoderm-derived structure | 1.30e-07 | 29 |
internal female genitalia | 4.09e-07 | 22 |
adult organism | 4.24e-07 | 114 |