FFCP PHASE1:Hg19::chr16:78274724..78274726,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:78274724..78274726,+ | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr16:78274724..78274726,+ | |||
|id=chr16:78274724..78274726,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.57e-20!12;CL:0000417!1.57e-20!12;CL:0000668!1.57e-20!12;CL:0000414!1.57e-20!12;CL:0000412!1.57e-20!12;CL:0000182!1.57e-20!12;CL:0002563!1.31e-16!4;CL:0000223!2.54e-12!59;CL:0002253!3.43e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.81e-40;4!CL:0002253;3.11e-21;2!CL:0002231;1.40e-14;3!CL:0002076;8.70e-10;42!CL:0002251;5.48e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.81e-40,4;CL:0002253,3.11e-21,2;CL:0002231,1.40e-14,3;CL:0002076,2.45e-09,42;CL:0002251,5.48e-09,20;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.93e-16!4;DOID:1612!1.93e-16!4;DOID:7!8.26e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.94e-40;4!DOID:1612;4.94e-40;4!DOID:299;4.84e-15;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.94e-40,4;DOID:1612,4.94e-40,4;DOID:299,4.84e-15,25 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.31e-16!4;UBERON:0001262!1.31e-16!4;UBERON:0004786!1.31e-16!4;UBERON:0004808!1.31e-16!4;UBERON:0001277!1.31e-16!4;UBERON:0003929!1.67e-13!54;UBERON:0003350!1.74e-13!5;UBERON:0002107!4.21e-13!19;UBERON:0006925!4.21e-13!19;UBERON:0008836!4.21e-13!19;UBERON:0008835!2.34e-11!22;UBERON:0003894!2.34e-11!22;UBERON:0009854!7.07e-11!23;UBERON:0007499!4.97e-10!25;UBERON:0009497!4.97e-10!25;UBERON:0000015!4.97e-10!25;UBERON:0002423!4.97e-10!25;UBERON:0006235!4.97e-10!25;UBERON:0004161!4.97e-10!25;UBERON:0005057!1.18e-09!26;UBERON:0009856!1.18e-09!26;UBERON:0000341!6.42e-09!2;UBERON:0003127!8.74e-09!2;UBERON:0005911!9.88e-09!82;UBERON:0004921!9.95e-09!129;UBERON:0004185!9.95e-09!129;UBERON:0002365!3.88e-08!31;UBERON:0002330!3.88e-08!31;UBERON:0000485!6.77e-08!9;UBERON:0002368!3.11e-07!35;UBERON:0000310!4.01e-07!10;UBERON:0001007!4.01e-07!155;UBERON:0001555!4.01e-07!155;UBERON:0007026!4.01e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.81e-40;4!UBERON:0001262;1.81e-40;4!UBERON:0004786;1.81e-40;4!UBERON:0004808;1.81e-40;4!UBERON:0001277;1.81e-40;4!UBERON:0000485;1.14e-23;7!UBERON:0003929;1.14e-23;7!UBERON:0003350;7.35e-21;8!UBERON:0000310;9.54e-17;10!UBERON:0001443;2.51e-15;11!UBERON:0001052;2.53e-11;4!UBERON:0000160;7.10e-10;17!UBERON:0004907;2.53e-09;5!UBERON:0000344;5.48e-09;20!UBERON:0005409;6.08e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.81e-40,4;UBERON:0001262,1.81e-40,4;UBERON:0004786,1.81e-40,4;UBERON:0004808,1.81e-40,4;UBERON:0001277,1.81e-40,4;UBERON:0003350,7.35e-21,8;UBERON:0000485,1.13e-18,9;UBERON:0000310,9.54e-17,10;UBERON:0001443,2.51e-15,11;UBERON:0001052,2.53e-11,4;UBERON:0000160,7.10e-10,17;UBERON:0001046,1.99e-09,19;UBERON:0004907,2.53e-09,5;UBERON:0000344,5.48e-09,20;UBERON:0003929,1.99e-07,54;UBERON:0005409,3.90e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.438675231623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49171278599886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:78274724..78274726,+ | |||
}} |
Latest revision as of 12:32, 25 July 2015
Short description: | p@chr16:78274724..78274726, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:78274724..78274726, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.81e-40 | 4 |
epithelial cell of large intestine | 3.11e-21 | 2 |
epithelial cell of prostate | 1.40e-14 | 3 |
endo-epithelial cell | 2.45e-09 | 42 |
epithelial cell of alimentary canal | 5.48e-09 | 20 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.81e-40 | 4 |
wall of intestine | 1.81e-40 | 4 |
gastrointestinal system mucosa | 1.81e-40 | 4 |
gastrointestinal system epithelium | 1.81e-40 | 4 |
intestinal epithelium | 1.81e-40 | 4 |
epithelium of mucosa | 7.35e-21 | 8 |
simple columnar epithelium | 1.13e-18 | 9 |
breast | 9.54e-17 | 10 |
chest | 2.51e-15 | 11 |
rectum | 2.53e-11 | 4 |
intestine | 7.10e-10 | 17 |
hindgut | 1.99e-09 | 19 |
lower digestive tract | 2.53e-09 | 5 |
mucosa | 5.48e-09 | 20 |
gut epithelium | 1.99e-07 | 54 |
gastrointestinal system | 3.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.94e-40 | 4 |
breast cancer | 4.94e-40 | 4 |
adenocarcinoma | 4.84e-15 | 25 |