FFCP PHASE1:Hg19::chr16:77468905..77468944,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17110 | |||
|TSSclassifier=strong | |||
|UniProt=B4DEX3 | |||
|association_with_transcript=0bp_to_ENST00000449265_5end | |||
|cluster_id=chr16:77468905..77468944,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_1_at_ADAMTS18_5end | |||
|id=chr16:77468905..77468944,- | |||
|ontology_enrichment_celltype=CL:0002139!2.74e-25!24;CL:0000115!2.66e-23!35;CL:0002078!4.34e-20!44;CL:0000071!1.34e-18!18;CL:0002546!1.34e-18!18;CL:0000213!1.65e-12!57;CL:0000215!1.65e-12!57;CL:0000222!1.02e-09!119;CL:1000413!3.30e-09!9;CL:0005020!2.84e-08!6;CL:0002138!2.84e-08!6;CL:0005022!2.84e-08!6;CL:0002543!4.69e-08!6;CL:0002544!2.27e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.75e-34;24!CL:0000115;1.15e-29;36!CL:0000071;5.91e-24;18!CL:0002078;5.50e-21;45!CL:0000213;2.82e-13;58!CL:0000215;2.82e-13;58!CL:0002138;2.90e-12;6!CL:0002543;6.03e-12;6!CL:1000413;1.79e-09;9!CL:0002544;3.12e-08;6!CL:0002618;4.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.46e-35,36;CL:0002139,2.35e-34,24;CL:0002078,1.17e-30,45;CL:0000071,7.87e-24,18;CL:0002546,7.87e-24,18;CL:0000213,4.75e-20,58;CL:0000215,4.75e-20,58;CL:0000222,2.25e-12,121;CL:0005020,2.89e-12,6;CL:0002138,2.89e-12,6;CL:0005022,2.89e-12,6;CL:0002543,6.41e-12,6;CL:1000413,2.39e-09,9;CL:0002544,3.32e-08,6;CL:0002618,4.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.91e-24;18!CL:0005022;2.90e-12;6!UBERON:0006215;5.10e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.14e-38!194;UBERON:0004111!4.55e-35!241;UBERON:0000477!3.89e-34!286;UBERON:0003075!1.44e-30!86;UBERON:0007284!1.44e-30!86;UBERON:0000119!3.39e-30!312;UBERON:0000483!1.13e-29!309;UBERON:0001049!2.94e-29!57;UBERON:0005068!2.94e-29!57;UBERON:0006241!2.94e-29!57;UBERON:0007135!2.94e-29!57;UBERON:0002049!3.03e-28!79;UBERON:0007798!3.03e-28!79;UBERON:0002346!3.17e-28!90;UBERON:0000055!8.93e-27!69;UBERON:0002616!7.84e-26!59;UBERON:0001981!4.95e-23!60;UBERON:0007500!4.95e-23!60;UBERON:0004537!4.95e-23!60;UBERON:0006965!4.95e-23!60;UBERON:0007023!2.50e-22!115;UBERON:0005743!8.85e-21!86;UBERON:0000955!1.93e-20!69;UBERON:0006238!1.93e-20!69;UBERON:0001017!1.97e-20!82;UBERON:0004535!1.10e-18!110;UBERON:0001986!1.34e-18!18;UBERON:0004638!1.34e-18!18;UBERON:0004852!1.34e-18!18;UBERON:0003056!2.03e-18!61;UBERON:0001009!2.48e-18!113;UBERON:0004872!5.66e-18!84;UBERON:0000073!7.99e-18!94;UBERON:0001016!7.99e-18!94;UBERON:0003080!9.60e-18!42;UBERON:0002780!6.49e-17!41;UBERON:0001890!6.49e-17!41;UBERON:0006240!6.49e-17!41;UBERON:0000153!1.24e-16!129;UBERON:0007811!1.24e-16!129;UBERON:0003914!3.00e-16!118;UBERON:0000033!4.25e-16!123;UBERON:0001637!5.07e-15!42;UBERON:0003509!5.07e-15!42;UBERON:0004572!5.07e-15!42;UBERON:0000487!6.01e-14!22;UBERON:0003076!2.00e-13!15;UBERON:0003057!2.00e-13!15;UBERON:0006914!4.64e-13!25;UBERON:0001893!1.72e-12!34;UBERON:0002020!2.68e-12!34;UBERON:0003528!2.68e-12!34;UBERON:0004573!3.03e-12!33;UBERON:0004571!3.03e-12!33;UBERON:0002791!8.32e-12!33;UBERON:0004121!1.60e-11!169;UBERON:0004733!2.63e-11!12;UBERON:0002028!2.63e-11!12;UBERON:0007277!2.63e-11!12;UBERON:0001869!3.01e-11!32;UBERON:0000924!8.41e-11!173;UBERON:0006601!8.41e-11!173;UBERON:0000468!1.34e-10!659;UBERON:0004732!3.87e-10!13;UBERON:0000475!5.20e-10!365;UBERON:0000922!7.35e-10!612;UBERON:0000467!1.17e-09!625;UBERON:0000480!1.45e-09!626;UBERON:0002680!3.17e-09!9;UBERON:0001895!3.17e-09!9;UBERON:0010092!3.17e-09!9;UBERON:0003915!3.30e-09!9;UBERON:0004700!3.30e-09!9;UBERON:0001917!3.30e-09!9;UBERON:0000947!4.03e-09!21;UBERON:0010191!4.03e-09!21;UBERON:0000064!4.78e-09!219;UBERON:0000481!8.88e-09!347;UBERON:0002050!5.49e-08!605;UBERON:0005423!5.49e-08!605;UBERON:0000923!1.16e-07!604;UBERON:0005291!1.16e-07!604;UBERON:0006598!1.16e-07!604;UBERON:0002532!1.16e-07!604;UBERON:0002298!2.34e-07!8;UBERON:0000956!2.72e-07!25;UBERON:0000203!2.72e-07!25;UBERON:0002308!3.48e-07!9;UBERON:0000125!3.48e-07!9;UBERON:0000490!4.35e-07!138;UBERON:0002037!5.26e-07!6;UBERON:0006215!5.26e-07!6;UBERON:0002420!6.80e-07!9;UBERON:0007245!6.80e-07!9;UBERON:0010009!6.80e-07!9;UBERON:0010011!6.80e-07!9;UBERON:0000454!6.80e-07!9;UBERON:0002619!8.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.91e-24;18!UBERON:0001986;5.91e-24;18!UBERON:0004852;5.91e-24;18!UBERON:0000487;1.12e-18;22!UBERON:0006914;5.67e-18;25!UBERON:0000055;5.14e-16;65!UBERON:0000490;3.83e-14;33!UBERON:0002049;4.41e-13;75!UBERON:0007798;4.41e-13;75!UBERON:0007500;5.72e-12;56!UBERON:0001981;5.72e-12;56!UBERON:0004537;5.72e-12;56!UBERON:0004733;2.08e-10;12!UBERON:0002028;2.08e-10;12!UBERON:0001638;6.11e-10;9!UBERON:0003920;6.11e-10;9!UBERON:0004582;6.11e-10;9!UBERON:0003915;1.79e-09;9!UBERON:0004700;1.79e-09;9!UBERON:0001917;1.79e-09;9!UBERON:0004732;1.87e-09;13!UBERON:0002680;4.13e-09;9!UBERON:0001895;4.13e-09;9!UBERON:0001473;6.53e-09;8!UBERON:0004536;6.53e-09;8!UBERON:0006558;6.53e-09;8!UBERON:0007625;7.15e-09;11!UBERON:0003914;8.44e-09;74!UBERON:0004573;3.28e-08;33!UBERON:0004571;3.28e-08;33!UBERON:0001637;3.75e-08;42!UBERON:0003509;3.75e-08;42!UBERON:0004572;3.75e-08;42!UBERON:0002037;6.22e-08;6!UBERON:0004535;3.00e-07;109!UBERON:0000025;3.47e-07;93!UBERON:0002465;6.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.25e-28,78;UBERON:0007798,6.25e-28,78;UBERON:0000055,4.66e-27,68;UBERON:0004638,7.87e-24,18;UBERON:0001986,7.87e-24,18;UBERON:0004852,7.87e-24,18;UBERON:0000025,2.65e-22,192;UBERON:0007500,5.31e-21,59;UBERON:0001981,5.31e-21,59;UBERON:0004537,5.31e-21,59;UBERON:0006965,5.31e-21,59;UBERON:0004111,3.02e-20,240;UBERON:0000487,1.41e-18,22;UBERON:0004535,1.56e-18,109;UBERON:0006914,6.60e-18,25;UBERON:0001009,1.08e-17,112;UBERON:0000483,3.17e-17,306;UBERON:0000119,7.56e-17,309;UBERON:0004872,1.66e-15,83;UBERON:0003075,1.80e-14,82;UBERON:0007284,1.80e-14,82;UBERON:0003914,3.24e-14,117;UBERON:0002346,2.30e-13,86;UBERON:0003076,3.48e-12,15;UBERON:0003057,3.48e-12,15;UBERON:0010371,2.74e-11,104;UBERON:0001049,4.15e-11,56;UBERON:0005068,4.15e-11,56;UBERON:0006241,4.15e-11,56;UBERON:0007135,4.15e-11,56;UBERON:0010314,8.72e-11,132;UBERON:0004733,1.40e-10,12;UBERON:0002028,1.40e-10,12;UBERON:0007277,1.40e-10,12;UBERON:0001638,6.14e-10,9;UBERON:0003920,6.14e-10,9;UBERON:0004582,6.14e-10,9;UBERON:0000073,9.22e-10,53;UBERON:0002616,9.22e-10,53;UBERON:0004732,1.31e-09,13;UBERON:0003915,2.39e-09,9;UBERON:0004700,2.39e-09,9;UBERON:0001917,2.39e-09,9;UBERON:0002680,3.02e-09,9;UBERON:0001895,3.02e-09,9;UBERON:0010092,3.02e-09,9;UBERON:0001637,5.21e-09,42;UBERON:0003509,5.21e-09,42;UBERON:0004572,5.21e-09,42;UBERON:0001473,6.51e-09,8;UBERON:0004536,6.51e-09,8;UBERON:0006558,6.51e-09,8;UBERON:0007625,6.93e-09,11;UBERON:0004573,1.41e-08,33;UBERON:0004571,1.41e-08,33;UBERON:0002037,5.56e-08,6;UBERON:0006215,5.56e-08,6;UBERON:0001017,1.12e-07,81;UBERON:0000955,5.23e-07,68;UBERON:0006238,5.23e-07,68;UBERON:0002465,6.57e-07,10;UBERON:0000353,8.85e-07,15;UBERON:0003056,9.29e-07,61 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,3.3954131665979,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,1.60057375499824,0.408001382488506,6.26909442956176,0,1.91624195102038,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,2.21729397462564,6.93894806975696,0.785874452986276,0,0,0,0,0,0,0,0,6.16163462836786,10.3228151412735,4.16568601929113,39.5715559346807,5.45349267072878,0.275118041940067,1.04497483268405,137.736132637252,97.1241897134719,76.3162997103448,5.63961043952806,11.4040815857777,5.85748938115607,37.8692972756245,0.81014194788176,48.4897524582553,32.1077002855423,17.5673909553983,21.4643292452237,7.59412527654503,5.1296488300514,0,0,0,0,0.506522046658319,0.662045904066094,4.30254931123221,1.77334191099179,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,1.2781333715647,4.04278114559945,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5012645471176,23.8411015465858,0.4115740113314,1.47008711385542,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,2.88662684050547,22.3745681601898,6.57488687720601,12.1267816119302,8.7967247389556,11.0347408296067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,3.11552657510173,0,0,0,0,0,0,0,2.70719767744447,0.924184045252977,0.784349769176855,0,0.105551628892876,14.7853399292166,11.22618454825,5.18198198645135,15.4227252690289,0,0,0,1.66215201785745,0,0,0,0,5.24823433119529,0,1.95777922130672,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08033580176089,2.66153015158511,0,0.74129687641568,0.429374660225974,0.372158369359667,0,0,0,0,4.13664222303718,0,0,0,0,3.841467149893,0,10.9527198622135,0,1.21856744815642,0,0,0,5.65040583101214,10.4759415273764,3.3171948762061,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8041614566089,0,0,0,0,0,0,0.994147647766298,0.422008249231538,1.44701316529778,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,2.41197055220813,0,0,0,5.07499702804355,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,19.8356257212208,35.3853631779919,25.7126428489586,1.09692698576986,0,0,3.15496059865568,0,0,0,1.08647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.353830258013357,0,0,0,0,3.50485891499521,1.60515529459758,2.34264445725339,0,0,0,0.394584402849391,0,0,1.13735843331278,0,0.414752765588989,0,0,0,0,0,0,0,0,0,0.52418000472609,1.20390222730132,0,0,0,0,0,3.16373037092745,0,0.794858446811959,1.64608069485285,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,2.40168115483916,1.09524303113594,0,0,0,1.11712960508902,0,0,0.199679000498991,0,0,0.268733889946905,0,29.1239873818635,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.91124334987037,0,0.157611414598396,2.25554728980492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,0.92562821219883,0,0,0,0.78602152549833,0,0,0,0,0,2.72008901684737,8.5234563967718,3.06345576763462,4.59021682993726,3.61224421375539,0,0.610131324509816,0.625954653532499,0.573409195690071,1.44207766997908,3.72578417648301,0,0,0,0,0,0.468334905806882,5.36207805860053,0,0,0,0,0,0,1.14420034198462,0,0.466311601748341,8.2798883994195,0,0,0,7.05000553329454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,0,0.638535436228605,0.205116364240755,0,1.24483054435592,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,0.781078098613847,0.206686796501184,0.443910671357348,0,0.548257766857182,0.496211178389294,0,0,1.07140367175657,0.336283722218824,1.21393120847326,2.27662191351298,6.38657065171,0,0,3.53442611479525,1.44700101838268,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,1.29068207646083,0,0,0,2.52017555398455,0,0,0,0,0,0,0.102662806856247,1.1598144313382,16.5141737640107,6.78424444040106,0,8.44332644520737,0.11294608203896,0,0,0,0.437119121007915,0,0,0.235676547101626,2.1593931382644,0.297046400327086,7.6078030965012,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,3.78651749263643,0.951880862672806,0.436350690340377,1.0580536810308,0,0,0,0.126166424835079,0.437062287854782,0.886889507080059,0,1.06886962106224,0,0.250707539292375,0.303114792872958,0.267964130156178,4.97501663675268,0.620597975171371,0,1.42838658878244,0.258355639344024,2.54506328613017,1.23345048838675,0,0.808468755832877,0,0.342233301085281,0.0673520530145875,0.286888821570705,2.66128285236811,0,0,0,0,0,1.833621662743,2.03448089157869,0,2.61655931668334,0 | |||
|short_description=p1@ADAMTS18 | |||
}} |
Latest revision as of 22:37, 17 September 2015
Short description: | p1@ADAMTS18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAMTS18_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_ENST00000449265_5end |
EntrezGene: | ADAMTS18 |
HGNC: | 17110 |
UniProt: | B4DEX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.46e-35 | 36 |
endothelial cell of vascular tree | 2.35e-34 | 24 |
meso-epithelial cell | 1.17e-30 | 45 |
blood vessel endothelial cell | 7.87e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.87e-24 | 18 |
lining cell | 4.75e-20 | 58 |
barrier cell | 4.75e-20 | 58 |
mesodermal cell | 2.25e-12 | 121 |
lymphangioblast | 2.89e-12 | 6 |
endothelial cell of lymphatic vessel | 2.89e-12 | 6 |
vascular lymphangioblast | 2.89e-12 | 6 |
vein endothelial cell | 6.41e-12 | 6 |
endothelial cell of artery | 2.39e-09 | 9 |
aortic endothelial cell | 3.32e-08 | 6 |
endothelial cell of umbilical vein | 4.74e-07 | 3 |