FFCP PHASE1:Hg19::chr16:67280824..67280836,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:67280824..67280836,+ | |||
|description=CAGE_peak_at_chr16:67280824..67280836,+ | |||
|id=chr16:67280824..67280836,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.48e-10!254;CL:0002076!3.48e-09!43;CL:0000223!4.28e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.07e-33;3!CL:0000771;6.43e-14;2!CL:0000322;1.47e-09;3!CL:0002327;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.51e-34,3;CL:0000771,6.43e-14,2;CL:0000322,1.81e-09,3;CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.78e-26;1!UBERON:0005754;6.72e-26;1!UBERON:0007297;1.14e-13;2!UBERON:0001041;4.38e-08;30 | |||
|ontology_enrichment_disease=DOID:305!5.14e-18!106;DOID:0050687!1.86e-13!143;DOID:1749!4.41e-13!14;DOID:299!6.81e-10!25;DOID:3119!2.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.14e-13;2!DOID:5093;1.40e-07;4!DOID:1612;1.40e-07;4!DOID:1324;1.49e-07;15!DOID:0050615;3.90e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.55e-13,2;DOID:5093,1.40e-07,4;DOID:1612,1.40e-07,4;DOID:1324,1.59e-07,15;DOID:0050615,4.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0005153!1.71e-08!37;UBERON:0005911!2.52e-08!82;UBERON:0002048!1.05e-07!22;UBERON:0000117!1.05e-07!22;UBERON:0000171!1.05e-07!22;UBERON:0000170!1.05e-07!22;UBERON:0005597!1.05e-07!22;UBERON:0000118!1.05e-07!22;UBERON:0005631!2.87e-07!14;UBERON:0000158!2.87e-07!14;UBERON:0000485!4.63e-07!9;UBERON:0006947!6.35e-07!3;UBERON:0004054!6.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.07e-33;3!UBERON:0000920;1.07e-33;3!UBERON:0000998;6.72e-26;1!UBERON:0006868;6.72e-26;1!UBERON:0004903;1.14e-13;2!UBERON:0002173;1.14e-13;2!UBERON:0002186;1.14e-13;2!UBERON:0000058;7.29e-11;10!UBERON:0005631;7.29e-11;10!UBERON:0000158;7.29e-11;10!UBERON:0004821;1.47e-09;3!UBERON:0007499;1.47e-09;3!UBERON:0003215;1.47e-09;3!UBERON:0010368;1.47e-09;3!UBERON:0009911;1.47e-09;3!UBERON:0002299;1.47e-09;3!UBERON:0006947;1.47e-09;3!UBERON:0006524;1.47e-09;3!UBERON:0008874;1.47e-09;3!UBERON:0002169;1.47e-09;3!UBERON:0004894;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001911;1.40e-07;4!UBERON:0005904;1.75e-07;4!UBERON:0009856;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.51e-34,3;UBERON:0000998,7.62e-26,1;UBERON:0006868,7.62e-26,1;UBERON:0003124,3.29e-15,7;UBERON:0004903,1.55e-13,2;UBERON:0002173,1.55e-13,2;UBERON:0002186,1.55e-13,2;UBERON:0006947,1.54e-09,3;UBERON:0004054,1.54e-09,3;UBERON:0004821,1.81e-09,3;UBERON:0003215,1.81e-09,3;UBERON:0010368,1.81e-09,3;UBERON:0009911,1.81e-09,3;UBERON:0002299,1.81e-09,3;UBERON:0006524,1.81e-09,3;UBERON:0008874,1.81e-09,3;UBERON:0002169,1.81e-09,3;UBERON:0004894,1.81e-09,3;UBERON:0005631,4.34e-08,14;UBERON:0000158,4.34e-08,14;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4;UBERON:0005904,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0.487894824518382,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.296964680832639,0.921482106297696,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,2.88617999987446,0,0.227586896570999,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.448788222048861,0,1.5950057986596,0.183195186803725,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.989471500037586,0.216388639742091,0.995261931078505,0,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0.391329237864179,0,0.789168805698781,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.391969589657511,0.34823682632161,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0.576361668616424,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0.83088067605837,0.449947783103001,0.77380195455795,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0.157204305099666,0.414239055347196,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.294443155503077,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0.68732060563215,0,0,0,0.196300467230486,0.731507549893617,0,0,0,0,0.467878926924211,0.994753875806841,0,0.22589216407792,0,0.301925687133347,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0.535928260312357,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:67280824..67280836,+ | |||
}} |
Latest revision as of 11:19, 25 July 2015
Short description: | p@chr16:67280824..67280836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67280824..67280836, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.51e-34 | 3 |
eosinophil | 6.43e-14 | 2 |
pneumocyte | 1.81e-09 | 3 |
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.51e-34 | 3 |
seminal vesicle | 7.62e-26 | 1 |
seminal fluid secreting gland | 7.62e-26 | 1 |
chorion | 3.29e-15 | 7 |
bronchoalveolar duct junction | 1.55e-13 | 2 |
alveolar duct | 1.55e-13 | 2 |
bronchiole | 1.55e-13 | 2 |
male genital duct | 1.54e-09 | 3 |
internal male genitalia | 1.54e-09 | 3 |
pulmonary alveolus epithelium | 1.81e-09 | 3 |
alveolus | 1.81e-09 | 3 |
pulmonary lobule | 1.81e-09 | 3 |
lobule | 1.81e-09 | 3 |
alveolus of lung | 1.81e-09 | 3 |
alveolar system | 1.81e-09 | 3 |
pulmonary acinus | 1.81e-09 | 3 |
alveolar sac | 1.81e-09 | 3 |
alveolar wall | 1.81e-09 | 3 |
extraembryonic membrane | 4.34e-08 | 14 |
membranous layer | 4.34e-08 | 14 |
mammary gland | 1.40e-07 | 4 |
mammary bud | 1.40e-07 | 4 |
mammary ridge | 1.40e-07 | 4 |
mammary placode | 1.40e-07 | 4 |
duct of male reproductive system | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.55e-13 | 2 |
thoracic cancer | 1.40e-07 | 4 |
breast cancer | 1.40e-07 | 4 |
lung cancer | 1.59e-07 | 15 |
respiratory system cancer | 4.14e-07 | 16 |