FFCP PHASE1:Hg19::chr16:58896129..58896134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:58896129..58896134,- | |||
|description=CAGE_peak_at_chr16:58896129..58896134,- | |||
|id=chr16:58896129..58896134,- | |||
|ontology_enrichment_celltype=CL:0000064!7.56e-47!3;CL:0005012!7.56e-47!3;CL:0000067!7.56e-47!3;CL:0002304!7.56e-47!3;CL:0002550!1.21e-16!1;CL:0000342!1.65e-16!1;CL:0002565!1.65e-16!1;CL:0000306!2.09e-16!4;CL:0002222!2.09e-16!4;CL:0002224!2.09e-16!4;CL:0000075!2.36e-14!27;CL:0000710!1.42e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.73e-117;3!CL:0000067;1.73e-117;3!CL:0005012;1.73e-117;3!CL:0002304;1.73e-117;3!CL:0000075;4.97e-24;27!CL:0000710;1.51e-18;20!CL:0002077;2.21e-11;34!CL:0000306;2.80e-11;4!CL:0002222;2.80e-11;4!CL:0002224;2.80e-11;4!CL:0000333;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.59e-117,3;CL:0000067,2.59e-117,3;CL:0005012,2.59e-117,3;CL:0002304,2.59e-117,3;CL:0000075,5.28e-24,27;CL:0000710,1.60e-18,20;CL:0000306,2.80e-11,4;CL:0002222,2.80e-11,4;CL:0002224,2.80e-11,4;CL:0002077,2.96e-11,34;CL:0000133,4.65e-11,59;CL:0000221,3.13e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.67e-61!4;UBERON:0007625!6.40e-50!11;UBERON:0001778!7.56e-47!3;UBERON:0001775!7.56e-47!3;UBERON:0002203!3.35e-41!6;UBERON:0001768!3.35e-41!6;UBERON:0001801!3.14e-39!14;UBERON:0000019!6.72e-29!19;UBERON:0000047!6.72e-29!19;UBERON:0004088!6.72e-29!19;UBERON:0003072!6.72e-29!19;UBERON:0003071!6.72e-29!19;UBERON:0004128!6.72e-29!19;UBERON:0000970!1.89e-27!20;UBERON:0002104!3.86e-26!21;UBERON:0001456!3.86e-26!21;UBERON:0000020!7.36e-24!23;UBERON:0001032!7.33e-23!24;UBERON:0004456!7.33e-23!24;UBERON:0002200!1.08e-22!11;UBERON:0006876!1.08e-22!11;UBERON:0005085!6.73e-19!29;UBERON:0002506!1.65e-16!1;UBERON:0001769!1.65e-16!1;UBERON:0010077!2.09e-16!4;UBERON:0005389!2.09e-16!4;UBERON:0000484!2.09e-16!4;UBERON:0002546!2.09e-16!4;UBERON:0000965!2.09e-16!4;UBERON:0001803!2.09e-16!4;UBERON:0003073!2.09e-16!4;UBERON:0005426!2.09e-16!4;UBERON:0001444!2.43e-11!48;UBERON:0000063!1.87e-09!97;UBERON:0003056!1.01e-08!61;UBERON:0000076!1.13e-08!8;UBERON:0003075!3.40e-08!86;UBERON:0007284!3.40e-08!86;UBERON:0002346!8.21e-08!90;UBERON:0000153!8.18e-07!129;UBERON:0007811!8.18e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.73e-117;3!UBERON:0001775;1.73e-117;3!UBERON:0000488;1.91e-88;4!UBERON:0002203;2.22e-59;6!UBERON:0001768;2.22e-59;6!UBERON:0002200;2.22e-59;6!UBERON:0007625;1.34e-57;11!UBERON:0001801;1.76e-45;14!UBERON:0000019;9.08e-34;19!UBERON:0000047;9.08e-34;19!UBERON:0004088;9.08e-34;19!UBERON:0010230;9.08e-34;19!UBERON:0006876;6.65e-33;11!UBERON:0000970;3.98e-32;20!UBERON:0002104;1.22e-30;21!UBERON:0001456;1.22e-30;21!UBERON:0000020;4.68e-28;23!UBERON:0001032;6.34e-27;24!UBERON:0004456;6.34e-27;24!UBERON:0010371;8.30e-21;31!UBERON:0010077;2.80e-11;4!UBERON:0005389;2.80e-11;4!UBERON:0000484;2.80e-11;4!UBERON:0000965;2.80e-11;4!UBERON:0001803;2.80e-11;4!UBERON:0001444;4.01e-10;48!UBERON:0000013;2.74e-09;5!UBERON:0002410;2.74e-09;5!UBERON:0000033;2.51e-08;50!UBERON:0000153;1.99e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.59e-117,3;UBERON:0001775,2.59e-117,3;UBERON:0000488,2.57e-88,4;UBERON:0002203,2.72e-59,6;UBERON:0001768,2.72e-59,6;UBERON:0002200,2.72e-59,6;UBERON:0007625,1.55e-57,11;UBERON:0001801,1.98e-45,14;UBERON:0006876,7.42e-33,11;UBERON:0000019,4.31e-32,20;UBERON:0000047,4.31e-32,20;UBERON:0010312,4.31e-32,20;UBERON:0004088,4.31e-32,20;UBERON:0010230,4.31e-32,20;UBERON:0003072,4.31e-32,20;UBERON:0004128,4.31e-32,20;UBERON:0003071,4.31e-32,20;UBERON:0000970,1.31e-30,21;UBERON:0002104,1.31e-30,21;UBERON:0001456,2.94e-29,22;UBERON:0000020,6.78e-27,24;UBERON:0001032,6.78e-27,24;UBERON:0004456,6.78e-27,24;UBERON:0005085,5.13e-21,31;UBERON:0001444,1.40e-13,49;UBERON:0000033,5.68e-12,56;UBERON:0010077,2.80e-11,4;UBERON:0005389,2.80e-11,4;UBERON:0000484,2.80e-11,4;UBERON:0002546,2.80e-11,4;UBERON:0000965,2.80e-11,4;UBERON:0001803,2.80e-11,4;UBERON:0003073,2.80e-11,4;UBERON:0005426,2.80e-11,4;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0003056,7.02e-11,61;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0002346,6.20e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89069634328136,5.09977614163897,4.0404001418838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,5.4007999348478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78811082417674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:58896129..58896134,- | |||
}} |
Latest revision as of 06:37, 17 September 2015
Short description: | p@chr16:58896129..58896134, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:58896129..58896134, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.59e-117 | 3 |
ciliated epithelial cell | 2.59e-117 | 3 |
multi-ciliated epithelial cell | 2.59e-117 | 3 |
non-pigmented ciliary epithelial cell | 2.59e-117 | 3 |
columnar/cuboidal epithelial cell | 5.28e-24 | 27 |
neurecto-epithelial cell | 1.60e-18 | 20 |
crystallin accumulating cell | 2.80e-11 | 4 |
vertebrate lens cell | 2.80e-11 | 4 |
lens epithelial cell | 2.80e-11 | 4 |
ecto-epithelial cell | 2.96e-11 | 34 |
neurectodermal cell | 4.65e-11 | 59 |
ectodermal cell | 3.13e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.54e-08 | 6 |