FFCP PHASE1:Hg19::chr16:30876603..30876606,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:30876603..30876606,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr16:30876603..30876606,+ | |||
|id=chr16:30876603..30876606,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.11e-28!5;CL:0000039!2.70e-13!7;CL:0000586!2.70e-13!7;CL:0000540!8.58e-10!6;CL:0000031!8.58e-10!6;CL:0000404!8.58e-10!6;CL:0000066!6.22e-09!254;CL:0000047!1.91e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-50;6!CL:0000404;6.35e-50;6!CL:0002149;8.01e-23;6!CL:0002255;8.01e-23;6!CL:0002319;8.62e-12;25!CL:0002322;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.51e-50,6;CL:0000031,7.51e-50,6;CL:0000404,7.51e-50,6;CL:0000047,1.18e-37,8;CL:0002149,7.58e-23,6;CL:0002255,7.58e-23,6;CL:0002319,8.94e-12,25;CL:0000133,3.00e-09,59;CL:0002322,5.73e-08,5;CL:0000221,1.04e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;6.35e-50;6!UBERON:0005795;3.84e-14;10 | |||
|ontology_enrichment_disease=DOID:305!2.56e-17!106;DOID:0050687!3.68e-13!143;DOID:3493!6.05e-12!2;DOID:162!4.36e-07!235;DOID:14566!7.56e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3001;8.01e-23;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.58e-23,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.49e-40!9;UBERON:0001557!2.63e-18!19;UBERON:0008947!7.72e-11!38;UBERON:0003258!7.72e-11!38;UBERON:0000072!1.07e-08!46;UBERON:0000065!2.34e-07!53;UBERON:0000473!5.06e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;9.81e-09;17!UBERON:0003975;2.65e-08;18!UBERON:0004175;3.00e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.95e-07,21;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,3.78481276313443,0.72995471815166,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,1.78801267576404,4.98528405635022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,1.91107787795487,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546327859818478,0,0,0.534434810531121,0.0918948995348449,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:30876603..30876606,+ | |||
}} |
Latest revision as of 08:19, 25 July 2015
Short description: | p@chr16:30876603..30876606, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30876603..30876606, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.51e-50 | 6 |
neuroblast | 7.51e-50 | 6 |
electrically signaling cell | 7.51e-50 | 6 |
neuronal stem cell | 1.18e-37 | 8 |
epithelial cell of uterus | 7.58e-23 | 6 |
stromal cell of endometrium | 7.58e-23 | 6 |
neural cell | 8.94e-12 | 25 |
neurectodermal cell | 3.00e-09 | 59 |
embryonic stem cell | 5.73e-08 | 5 |
ectodermal cell | 1.04e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
uterus | 2.95e-07 | 21 |
embryonic uterus | 5.74e-07 | 22 |
internal female genitalia | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.58e-23 | 6 |