FFCP PHASE1:Hg19::chr8:27995319..27995365,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:27995319..27995365,+
|short_description=p@chr8:27995319..27995365,+
|description=CAGE_peak_at_chr8:27995319..27995365,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:27995319..27995365,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr8:27995319..27995365,+ | |||
|id=chr8:27995319..27995365,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.66e-74;3!CL:0000349;2.58e-21;19!CL:0002536;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.66e-74,3;CL:0000349,2.58e-21,19;CL:0002536,1.07e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.26e-25;4!DOID:1612;1.26e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-25,4;DOID:1612,1.26e-25,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.80e-56;4!UBERON:0000478;5.45e-17;24!UBERON:0000310;6.94e-11;10!UBERON:0001443;5.54e-10;11!UBERON:0000077;5.58e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.80e-56,4;UBERON:0004340,3.80e-56,4;UBERON:0003124,1.67e-32,7;UBERON:0005631,1.04e-28,14;UBERON:0000158,1.04e-28,14;UBERON:0000478,5.45e-17,24;UBERON:0000995,2.34e-11,21;UBERON:0000310,6.94e-11,10;UBERON:0005795,7.16e-11,22;UBERON:0003975,7.16e-11,22;UBERON:0001443,5.54e-10,11;UBERON:0004175,1.20e-09,25;UBERON:0000077,2.10e-08,29 | |||
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| ||
|short_description=p@chr8:27995319..27995365,+ | |||
}} | }} |
Latest revision as of 17:41, 31 July 2015
Short description: | p@chr8:27995319..27995365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27995319..27995365, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.66e-74 | 3 |
extraembryonic cell | 2.58e-21 | 19 |
amniotic epithelial cell | 1.07e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.80e-56 | 4 |
allantois | 3.80e-56 | 4 |
chorion | 1.67e-32 | 7 |
extraembryonic membrane | 1.04e-28 | 14 |
membranous layer | 1.04e-28 | 14 |
extraembryonic structure | 5.45e-17 | 24 |
uterus | 2.34e-11 | 21 |
breast | 6.94e-11 | 10 |
embryonic uterus | 7.16e-11 | 22 |
internal female genitalia | 7.16e-11 | 22 |
chest | 5.54e-10 | 11 |
internal genitalia | 1.20e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 2.10e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.26e-25 | 4 |
breast cancer | 1.26e-25 | 4 |