FFCP PHASE1:Hg19::chr16:2653560..2653575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=652276 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=175bp_to_NR_015441,uc002cqx.2,uc002cqy.3_5end | |||
|cluster_id=chr16:2653560..2653575,+ | |||
|description=CAGE_peak_4_at_LOC652276_5end | |||
|id=chr16:2653560..2653575,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.26e-07!180;CL:0000192!5.22e-07!42;CL:0000514!5.22e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.25e-09;3!CL:0000077;2.42e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.27e-09,3;CL:0000077,3.62e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.16e-07!82;UBERON:0000483!7.51e-07!309;UBERON:0000119!9.09e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;6.75e-09;3!UBERON:0005382;6.75e-09;3!UBERON:0001874;4.68e-07;1!UBERON:0000369;7.18e-07;4!UBERON:0002435;7.18e-07;4!UBERON:0000204;7.18e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.40e-09,3;UBERON:0005382,6.40e-09,3;UBERON:0001874,4.31e-07,1;UBERON:0000369,6.90e-07,4;UBERON:0002435,6.90e-07,4;UBERON:0000204,6.90e-07,4;UBERON:0010082,6.90e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0.893922188854576,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0.994192127183747,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,2.6759125968766,0,1.68152568894461,0.526768169550154,0,0,0.411202997999018,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0,0.0654895377488563,0,0.370784442784429,0,0,0.132957960518865,3.10037811596945,5.14795419702115,0.74291500265913,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.302714855289863,0.576175924479999,0,0.312160076830321,0.570471821544449,0.896692083310806,0.117434498643765,0,0.421352420106746,0.204154171254893,0,0,1.18800285728205,0,0,1.43723628363248,0,0,0.554128230968366,0,0,0.45071417671979,0.113432183160021,0,0,0,0.300091096084402,0.309157587715317,0,0.37223371266318,0.675105328965065,0.584622030967192,1.26216887122057,0.184099797284599,0.484938170456436,0,0.201504196455281,0.169560592310488,0.386521706326594,0.818238361772504,0.860413786167011,0.243947412259191,0,0.232387885739037,0.414644220061482,0.252320850875628,0.36497735907583,0,1.92972281457866,0,0,0.721879481669586,0.118306800039844,0.505754070234305,0,0.330881918197182,0,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0.245976877086227,0.343135620597051,0.548751427043128,0,0.502644862058154,0.0925884451585296,0.651616610620649,1.03993478527958,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0.901029173531752,0,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0.514414748524284,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,1.09970290300263,2.43247561282381,0,0,0.239624855491583,0,0,1.73737568001095,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.819989904948992,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.574890092096664,0.519254429183621,0.581051892299796,0.120859449591622,0.200506470303285,0.276242966807689,0,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0.183138929636687,0.247528499761764,1.72279661398852,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.426133137080504,0.356128142586949,0.826424576804891,0.576570202095319,0.255225424989168,0.10115778085555,1.39453664789186,1.88887408098384,0,0.924100740528266,1.06461206063404,0,0.74129687641568,0.143124886741991,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0.823611089208164,0.353437207037059,0.808729926293264,1.58510321173008,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0.565621727814851,0,0.551365343546124,1.32687795048244,0.876901770507525,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0.143411352204052,0.491245205065606,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.282431402330337,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,0,0.318852545457645,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0,0.281338832821026,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0,0.246169610922139,0,0.359473404589307,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| |||
|short_description=p4@LOC652276 | |||
}} |
Latest revision as of 20:53, 15 September 2015
Short description: | p4@LOC652276 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC652276_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_NR_015441, uc002cqx.2, uc002cqy.3_5end |
EntrezGene: | LOC652276 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.27e-09 | 3 |
mesothelial cell | 3.62e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 6.40e-09 | 3 |
dorsal striatum | 6.40e-09 | 3 |
putamen | 4.31e-07 | 1 |
corpus striatum | 6.90e-07 | 4 |
striatum | 6.90e-07 | 4 |
ventral part of telencephalon | 6.90e-07 | 4 |
future corpus striatum | 6.90e-07 | 4 |