FFCP PHASE1:Hg19::chr15:81199093..81199117,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:81199093..81199117,+ | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81199093..81199117,+ | |||
|id=chr15:81199093..81199117,+ | |||
|ontology_enrichment_celltype=CL:0000057!7.13e-26!75;CL:0000055!4.11e-19!180;CL:0002620!1.45e-14!23;CL:0002334!4.42e-09!12;CL:1000306!1.44e-07!4;CL:0002547!1.44e-07!4;CL:0002579!6.01e-07!3;CL:0000135!9.18e-07!3;CL:0000386!9.18e-07!3;CL:0000388!9.18e-07!3;CL:0002580!9.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.33e-21;12!CL:0002579;6.11e-17;3!CL:0000135;2.14e-16;3!CL:0000388;2.14e-16;3!CL:0002580;2.44e-16;3!CL:0002617;1.42e-11;2!CL:0000136;4.10e-10;13!CL:0002615;3.71e-08;3!CL:0000499;5.65e-08;28!CL:0000214;1.21e-07;3!CL:0002616;8.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.90e-22,76;CL:0002334,7.35e-21,12;CL:0002579,6.13e-17,3;CL:0000135,2.04e-16,3;CL:0000388,2.04e-16,3;CL:0002580,2.38e-16,3;CL:0002617,1.61e-11,2;CL:0000136,1.05e-08,15;CL:0002615,3.65e-08,3;CL:0000134,4.92e-08,354;CL:0000499,6.78e-08,28;CL:0002320,9.49e-08,361;CL:0000214,1.38e-07,3;CL:0000048,8.15e-07,427;CL:0002616,8.81e-07,1;CL:0000219,9.53e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.60e-08!5;DOID:450!2.60e-08!5;DOID:66!2.60e-08!5;DOID:423!2.60e-08!5;DOID:0080000!2.60e-08!5;DOID:11722!2.60e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.31e-12!40;UBERON:0003688!5.99e-12!6;UBERON:0002358!5.99e-12!6;UBERON:0003684!5.99e-12!6;UBERON:0001178!5.99e-12!6;UBERON:0002199!1.46e-10!45;UBERON:0002416!1.46e-10!45;UBERON:0003102!3.40e-10!95;UBERON:0004457!1.97e-09!12;UBERON:0000042!1.97e-09!12;UBERON:0000415!1.44e-07!4;UBERON:0007240!1.44e-07!4;UBERON:0005742!1.44e-07!4;UBERON:0005734!1.44e-07!4;UBERON:0004664!1.44e-07!4;UBERON:0004663!1.44e-07!4;UBERON:0000475!2.71e-07!365;UBERON:0000043!9.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.19e-28;9!UBERON:0000042;5.19e-28;9!UBERON:0003688;1.86e-22;6!UBERON:0002358;1.86e-22;6!UBERON:0003684;1.86e-22;6!UBERON:0001178;1.86e-22;6!UBERON:0007846;2.14e-16;3!UBERON:0000043;2.14e-16;3!UBERON:0007845;2.14e-16;3!UBERON:0000310;5.85e-13;10!UBERON:0005406;9.06e-12;2!UBERON:0001443;9.33e-12;11!UBERON:0006915;1.21e-07;3!UBERON:0007616;1.21e-07;3!UBERON:0002217;1.21e-07;3!UBERON:0002018;1.21e-07;3!UBERON:0002384;6.30e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.82e-22,6;UBERON:0002358,1.82e-22,6;UBERON:0003684,1.82e-22,6;UBERON:0001178,1.82e-22,6;UBERON:0004457,9.88e-21,12;UBERON:0000042,9.88e-21,12;UBERON:0007846,2.04e-16,3;UBERON:0000043,2.04e-16,3;UBERON:0007845,2.04e-16,3;UBERON:0000310,6.16e-13,10;UBERON:0005406,9.57e-12,2;UBERON:0001443,9.78e-12,11;UBERON:0002384,3.87e-08,371;UBERON:0006915,1.38e-07,3;UBERON:0007616,1.38e-07,3;UBERON:0002217,1.38e-07,3;UBERON:0002018,1.38e-07,3;UBERON:0004923,2.65e-07,66 | |||
|phase1_expression=3.08853244759946,6.20891519283851,4.79244973926302,10.007329835313,0.893922188854576,8.72338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,1.00267582127178,0.579386075843295,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.379891534993739,1.58891016975863,2.29469296599051,0.709336764396714,1.68203280042692,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,1.7308685049499,0,0,0,0,0,0.438977620880838,8.88814607817157,1.05166641234618,0,0.717558542755448,0.213557388818567,1.48352330811693,1.20036438433761,0.103052529238439,0.772921620136887,0.18611685633159,0.675105328965065,0.584622030967192,0.757301322732344,0.736399189138395,2.42469085228218,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,2.27407504055985,0,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0,3.2254015016441,2.76231551918512,7.85848264412606,7.94462725385346,7.67560873600055,9.97294311090366,4.45254199334973,0,0,0.0821271560138091,0,0,0,0,0,0.459257792658427,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.565621727814851,0,0,1.99031692572366,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.455768223388005,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0.378806010550178,0.754703705257725,1.77962244319307,0.228840068396924,1.81477108515887,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,1.62065732026684,0,0,0,1.97355644620836,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,3.71995018166751,5.0839319149456,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:81199093..81199117,+ | |||
}} |
Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81199093..81199117, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81199093..81199117, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.90e-22 | 76 |
preadipocyte | 7.35e-21 | 12 |
omentum preadipocyte | 6.13e-17 | 3 |
fibrocyte | 2.04e-16 | 3 |
tendon cell | 2.04e-16 | 3 |
preadipocyte of the breast | 2.38e-16 | 3 |
adipocyte of breast | 1.61e-11 | 2 |
fat cell | 1.05e-08 | 15 |
adipocyte of omentum tissue | 3.65e-08 | 3 |
mesenchymal cell | 4.92e-08 | 354 |
stromal cell | 6.78e-08 | 28 |
connective tissue cell | 9.49e-08 | 361 |
synovial cell | 1.38e-07 | 3 |
multi fate stem cell | 8.15e-07 | 427 |
perirenal adipocyte cell | 8.81e-07 | 1 |
motile cell | 9.53e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.82e-22 | 6 |
peritoneum | 1.82e-22 | 6 |
abdominal cavity | 1.82e-22 | 6 |
visceral peritoneum | 1.82e-22 | 6 |
cavity lining | 9.88e-21 | 12 |
serous membrane | 9.88e-21 | 12 |
dense regular connective tissue | 2.04e-16 | 3 |
tendon | 2.04e-16 | 3 |
regular connective tissue | 2.04e-16 | 3 |
breast | 6.16e-13 | 10 |
perirenal fat | 9.57e-12 | 2 |
chest | 9.78e-12 | 11 |
connective tissue | 3.87e-08 | 371 |
stratified squamous epithelium | 1.38e-07 | 3 |
layer of synovial tissue | 1.38e-07 | 3 |
synovial joint | 1.38e-07 | 3 |
synovial membrane of synovial joint | 1.38e-07 | 3 |
organ component layer | 2.65e-07 | 66 |