FFCP PHASE1:Hg19::chr15:74501321..74501344,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30650 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BX79,B3KPB8 | |||
|association_with_transcript=26bp_to_ENST00000323940,ENST00000423167,ENST00000432245,NM_001142617,NM_001142619,NM_001142620,uc002axm.2,uc002axn.2,uc010bjk.2_5end | |||
|cluster_id=chr15:74501321..74501344,- | |||
|description=CAGE_peak_6_at_STRA6_5end | |||
|id=chr15:74501321..74501344,- | |||
|ontology_enrichment_celltype=CL:0002322!1.00e-09!5;CL:0000066!5.06e-09!254;CL:0000306!1.88e-08!4;CL:0002222!1.88e-08!4;CL:0002224!1.88e-08!4;CL:0000064!2.32e-07!3;CL:0005012!2.32e-07!3;CL:0000067!2.32e-07!3;CL:0002304!2.32e-07!3;CL:0002603!4.06e-07!3;CL:0000075!7.97e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002603;9.44e-09;3!CL:0000064;1.39e-08;3!CL:0000067;1.39e-08;3!CL:0005012;1.39e-08;3!CL:0002304;1.39e-08;3!CL:0000182;8.44e-08;12!CL:0000319;2.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,8.41e-09,3;CL:0000064,1.24e-08,3;CL:0000067,1.24e-08,3;CL:0005012,1.24e-08,3;CL:0002304,1.24e-08,3;CL:0000182,7.37e-08,12;CL:0000319,1.98e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.68e-08;11!UBERON:0009497;3.32e-07;13 | |||
|ontology_enrichment_disease=DOID:162!4.53e-10!235;DOID:14566!1.37e-09!239;DOID:305!1.92e-09!106;DOID:0050687!2.26e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;2.10e-07;1!DOID:0050619;2.92e-07;1!DOID:1357;2.92e-07;1!DOID:2355;7.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.98e-07,1;DOID:162,2.76e-07,235;DOID:0050619,3.01e-07,1;DOID:1357,3.01e-07,1;DOID:14566,4.85e-07,239;DOID:2355,6.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.65e-21!11;UBERON:0000970!2.16e-16!20;UBERON:0002104!1.97e-15!21;UBERON:0000019!4.15e-15!19;UBERON:0000047!4.15e-15!19;UBERON:0004088!4.15e-15!19;UBERON:0003072!4.15e-15!19;UBERON:0003071!4.15e-15!19;UBERON:0004128!4.15e-15!19;UBERON:0000020!9.10e-14!23;UBERON:0001456!2.41e-13!21;UBERON:0001032!4.85e-13!24;UBERON:0004456!4.85e-13!24;UBERON:0005085!2.58e-10!29;UBERON:0000966!1.77e-09!5;UBERON:0005388!1.77e-09!5;UBERON:0001802!1.77e-09!5;UBERON:0000488!3.84e-09!4;UBERON:0001048!9.98e-09!168;UBERON:0010077!1.88e-08!4;UBERON:0005389!1.88e-08!4;UBERON:0000484!1.88e-08!4;UBERON:0002546!1.88e-08!4;UBERON:0000965!1.88e-08!4;UBERON:0001803!1.88e-08!4;UBERON:0003073!1.88e-08!4;UBERON:0005426!1.88e-08!4;UBERON:0001801!2.25e-08!14;UBERON:0001778!2.32e-07!3;UBERON:0001775!2.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.81e-12;2!UBERON:0005058;4.81e-12;2!UBERON:0009113;4.81e-12;2!UBERON:0001778;1.39e-08;3!UBERON:0001775;1.39e-08;3!UBERON:0007625;2.29e-08;11!UBERON:0001764;2.92e-07;1!UBERON:0001825;2.92e-07;1!UBERON:0006834;7.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.24e-08,3;UBERON:0001775,1.24e-08,3;UBERON:0007625,2.29e-08,11;UBERON:0001764,3.01e-07,1;UBERON:0001825,3.01e-07,1;UBERON:0006834,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,2.58554221961255,3.4680117511523,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02511414925017,1.77383517970051,0.966182642624386,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,1.06023814657188,0.69716365721711,0.725627385107593,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,2.06311345710401,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,1.44876399560722,0,0,0,0,0,0,0,0,5.27813520319984,0,0,0.251932747854276,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0,0,19.4167266571899,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.971121518136371,0,0,0,0,0,0,4.6525771089503,0,0.941798755221676,0,0,0,0,0,3.3082498500553,0,0,0,0,0,0,0,0.225980740780532,0.411125773940253,0,0,0.391102765469606,0.160317640503067,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,1.57566364614447,2.22522817629149,1.75249214020881,0.0984274815147488,1.52411997718412,0,0,0.482259445395058,0,0,0,0,0,0,0.630445658393585,0.209818352539992,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.339936274560377,0,0,0,0,0,0.704815022316672,0.533937062838473,0,0,0,0.790446527591777,0,0,0,0,0,0,3.29813602125492,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26705925512272,0.463044948647668,0,6.08902059677057,1.23520578864389,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,5.89854981008926,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,23.7520350340484,0,0.0714765441766563,0.47404083519818,39.1733603490582,0.347716544605159,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0,0,19.8950775161368,0,0.79062257427272,0,2.8682940277668,0,0,3.29222107453066,0,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0.315543124386369,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0,0,0,0,0,0,1.0334225573761,1.98639085746745,0,0,0,0,0,0,0.645499848534087,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@STRA6 | |||
}} |
Latest revision as of 00:48, 19 September 2015
Short description: | p6@STRA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STRA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000323940, ENST00000423167, ENST00000432245, NM_001142617, NM_001142619, NM_001142620, uc002axm.2, uc002axn.2, uc010bjk.2_5end |
EntrezGene: | STRA6 |
HGNC: | 30650 |
UniProt: | Q9BX79B3KPB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 8.41e-09 | 3 |
ciliated cell | 1.24e-08 | 3 |
ciliated epithelial cell | 1.24e-08 | 3 |
multi-ciliated epithelial cell | 1.24e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.24e-08 | 3 |
hepatocyte | 7.37e-08 | 12 |
mucus secreting cell | 1.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.24e-08 | 3 |
ciliary body | 1.24e-08 | 3 |
pigment epithelium of eye | 2.29e-08 | 11 |
maxillary sinus | 3.01e-07 | 1 |
paranasal sinus | 3.01e-07 | 1 |
uterus or analog | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.98e-07 | 1 |
cancer | 2.76e-07 | 235 |
paranasal sinus cancer | 3.01e-07 | 1 |
maxillary sinus cancer | 3.01e-07 | 1 |
disease of cellular proliferation | 4.85e-07 | 239 |
anemia | 6.49e-07 | 1 |