FFCP PHASE1:Hg19::chr8:22844824..22844832,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22844824..22844832,+
|short_description=p23@RHOBTB2
|description=CAGE_peak_23_at_RHOBTB2_5end
|association_with_transcript=-97bp_to_ENST00000519685,NM_0011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23221 | |EntrezGene=23221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |HGNC=18756 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | ||
|association_with_transcript=-97bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |||
|cluster_id=chr8:22844824..22844832,+ | |||
|description=CAGE_peak_23_at_RHOBTB2_5end | |||
|id=chr8:22844824..22844832,+ | |||
|ontology_enrichment_celltype=CL:0000039!9.01e-17!7;CL:0000586!9.01e-17!7;CL:0002159!4.14e-13!13;CL:0000575!5.13e-11!2;CL:0000240!1.25e-07!6;CL:0000311!1.25e-07!6;CL:0000079!1.25e-07!6;CL:0000237!1.25e-07!6;CL:0000036!1.25e-07!6;CL:0000357!1.25e-07!6;CL:0000114!1.25e-07!6;CL:0002231!3.72e-07!3;CL:0002150!6.88e-07!3;CL:0000861!6.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000415;7.05e-34;2!CL:0002537;1.60e-14;5!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.05e-34,2;CL:0002537,1.60e-14,5;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.06e-15!22;UBERON:0000079!1.06e-15!22;UBERON:0003135!1.36e-10!11;UBERON:0000473!1.06e-09!8;UBERON:0003937!1.32e-09!12;UBERON:0005399!1.32e-09!12;UBERON:0005156!6.74e-09!59;UBERON:0000990!6.74e-09!59;UBERON:0005631!1.54e-08!14;UBERON:0000158!1.54e-08!14;UBERON:0005157!1.37e-07!51;UBERON:0006947!2.32e-07!3;UBERON:0004054!2.32e-07!3;UBERON:0005153!4.68e-07!37;UBERON:0002367!6.68e-07!11;UBERON:0010147!6.68e-07!11;UBERON:0009846!6.68e-07!11;UBERON:0003353!6.68e-07!11;UBERON:0004902!6.68e-07!11;UBERON:0003820!6.68e-07!11;UBERON:0009847!6.68e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;4.09e-23;3!UBERON:0000305;8.99e-11;7!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0005631;6.13e-08;10!UBERON:0000158;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,4.09e-23,3;UBERON:0006242,4.09e-23,3;UBERON:0000305,8.99e-11,7;UBERON:0004871,1.35e-09,8;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9 | |||
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|short_description=p23@RHOBTB2 | |||
}} | }} |
Latest revision as of 12:58, 17 September 2015
Short description: | p23@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RHOBTB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.05e-34 | 2 |
amnion mesenchymal stem cell | 1.60e-14 | 5 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 4.09e-23 | 3 |
gall bladder primordium | 4.09e-23 | 3 |
amnion | 8.99e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.35e-09 | 8 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |