FFCP PHASE1:Hg19::chr15:41136360..41136365,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11246 | |||
|TSSclassifier=strong | |||
|UniProt=F5H877,O43278 | |||
|association_with_transcript=114bp_to_ENST00000536281,NM_003710,NM_181642,uc001zna.2,uc001znb.2_5end | |||
|cluster_id=chr15:41136360..41136365,+ | |||
|coexpression_cluster_id=C1334 | |||
|description=CAGE_peak_8_at_SPINT1_5end | |||
|id=chr15:41136360..41136365,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.44e-30!254;CL:0002076!2.04e-16!43;CL:0000223!9.63e-13!59;CL:0002368!9.92e-11!13;CL:0002322!1.32e-07!5;CL:0002159!3.28e-07!13;CL:0000039!3.44e-07!7;CL:0000586!3.44e-07!7;CL:0002202!8.48e-07!9;CL:0002632!8.48e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.74e-15;5!CL:0000039;4.84e-11;7!CL:0000586;4.84e-11;7!CL:0002368;1.68e-10;13!CL:0002202;2.78e-08;9!CL:0002632;2.78e-08;9!CL:0002076;8.31e-08;42!CL:0002159;1.39e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-17,253;CL:0002322,3.88e-15,5;CL:0000039,3.49e-11,7;CL:0000586,3.49e-11,7;CL:0002368,1.01e-10,13;CL:0002076,1.30e-10,42;CL:0000223,3.14e-09,58;CL:0002202,2.53e-08,9;CL:0002632,2.53e-08,9;CL:0002159,1.48e-07,14;CL:0002077,2.75e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;9.72e-07;58 | |||
|ontology_enrichment_disease=DOID:305!3.82e-19!106;DOID:0050687!2.27e-14!143;DOID:1749!1.52e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.02e-16!169;UBERON:0000925!6.02e-16!169;UBERON:0006595!6.02e-16!169;UBERON:0005631!5.30e-12!14;UBERON:0000158!5.30e-12!14;UBERON:0000464!8.97e-12!104;UBERON:0005153!3.20e-11!37;UBERON:0005911!1.19e-10!82;UBERON:0000077!1.25e-10!130;UBERON:0001007!1.45e-10!155;UBERON:0001555!1.45e-10!155;UBERON:0007026!1.45e-10!155;UBERON:0001004!2.38e-10!72;UBERON:0000466!4.51e-10!126;UBERON:0003124!3.24e-09!7;UBERON:0000065!7.04e-09!53;UBERON:0004921!1.61e-08!129;UBERON:0004185!1.61e-08!129;UBERON:0006554!2.27e-08!44;UBERON:0005178!3.45e-08!34;UBERON:0002224!3.45e-08!34;UBERON:0001008!4.77e-08!45;UBERON:0005181!8.28e-08!35;UBERON:0005157!2.27e-07!51;UBERON:0000058!2.99e-07!26;UBERON:0000915!3.09e-07!52;UBERON:0005177!5.54e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.20e-10,14;UBERON:0000158,6.20e-10,14;UBERON:0001987,1.58e-07,4;UBERON:0004340,1.58e-07,4;UBERON:0003124,2.81e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,16.7472280313383,0.873765488520689,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,1.8072355126695,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,4.00724817121796,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,1.14721838155602,1.58565817968474,1.06023814657188,1.62671520017326,1.55491582523056,1.51392510525377,1.09493207722749,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.658501712451753,2.24803506515239,2.11110842064425,0.277765335475589,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0.234004265139238,0,0,1.6798212819886,1.13420077793909,0.358234090811393,1.16253575405585,2.68367875415648,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.20303882181971,1.74953878978203,0,0,0,0.902399225814824,0.847168708148562,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0,1.27438136522519,4.15538004464362,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,0.510450849978337,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,1.08890984861323,0.564862804660675,3.01353760869861,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,1.19372242368845,0.593929361665277,1.84296421259539,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0.988551862620595,1.07412704805365,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.962059999958153,1.44999915086959,0.796554137998498,0.508507300585533,0.709163045303809,0,0,0,0,0,1.52581736317083,0,0,0,0,0.278847488557207,0,0,2.76676685265672,0.448788222048861,2.17294743844016,0.957003479195758,0.732780747214898,1.5991043280559,0,0,0,0,0,0,0,0,0,1.30586246527318,0.565412285735763,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.978323094660449,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.347119476670262,1.46988596121566,0.261177619741208,0.873633341210151,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0,0.391102765469606,0.480952921509202,0.640358984218058,0,0.72045208577053,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,1.60753148465019,1.2378549293751,1.66176135211674,0,0,0,0,0.394028536495991,1.04909176269996,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,1.41348686625211,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0.211312123358627,0,0,0,0,0,1.81843360035278,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.11796972334774,0,1.03973099535304,0,0,0,0,0,0.781514011233092,1.57144016688853,0,0.295712172434091,0,0,0,0,0,1.09651553371436,0,0.175871244359621,1.40538670403555,0,0,0.606965604236632,0.682986574053893,1.1531308121143,0,0,0,0,0.118193840883968,0.333694205676207,0.470958557103084,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.782988022584546,1.17780280338292,0.243835849964539,0,0,0,0,0.701818390386317,1.19370465096821,0,0.5647304101948,0,1.05673990496671,0.540219106755613,0,2.35158648180761,0,1.17838273550813,0,0,0,0,0,0,0,0.535661815816973,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,1.42784361638774,1.60330443159336,1.28652859348783,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.700118741059814,0.808468755832877,0.653150243690884,0,0.0673520530145875,0.573777643141411,0,0.89543595472072,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p8@SPINT1 | |||
}} |
Latest revision as of 13:57, 17 September 2015
Short description: | p8@SPINT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPINT1_5end |
Coexpression cluster: | C1334_Alveolar_gall_Renal_nasal_Prostate_signet_colon |
Association with transcript: | 114bp_to_ENST00000536281, NM_003710, NM_181642, uc001zna.2, uc001znb.2_5end |
EntrezGene: | SPINT1 |
HGNC: | 11246 |
UniProt: | F5H877O43278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.68e-17 | 253 |
embryonic stem cell | 3.88e-15 | 5 |
germ line cell | 3.49e-11 | 7 |
germ cell | 3.49e-11 | 7 |
respiratory epithelial cell | 1.01e-10 | 13 |
endo-epithelial cell | 1.30e-10 | 42 |
endodermal cell | 3.14e-09 | 58 |
epithelial cell of tracheobronchial tree | 2.53e-08 | 9 |
epithelial cell of lower respiratory tract | 2.53e-08 | 9 |
general ecto-epithelial cell | 1.48e-07 | 14 |
ecto-epithelial cell | 2.75e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.20e-10 | 14 |
membranous layer | 6.20e-10 | 14 |
placenta | 1.58e-07 | 4 |
allantois | 1.58e-07 | 4 |
chorion | 2.81e-07 | 7 |