FFCP PHASE1:Hg19::chr15:39882120..39882131,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:39882120..39882131,- | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39882120..39882131,- | |||
|id=chr15:39882120..39882131,- | |||
|ontology_enrichment_celltype=CL:0000057!6.76e-19!75;CL:0002371!7.30e-14!591;CL:0000144!4.14e-13!625;CL:0000055!4.16e-13!180;CL:0002139!4.90e-12!24;CL:0000548!3.44e-11!679;CL:0000004!3.44e-11!679;CL:0000255!3.44e-11!679;CL:0000012!7.49e-11!682;CL:0002334!3.93e-10!12;CL:0002620!4.33e-10!23;CL:0000071!2.54e-09!18;CL:0002546!2.54e-09!18;CL:0000115!6.23e-09!35;CL:0000222!1.10e-07!119;CL:0000003!4.68e-07!722;CL:0000213!4.79e-07!57;CL:0000215!4.79e-07!57;CL:0000063!7.78e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.49e-12;12!CL:0002580;6.92e-09;3!CL:0002620;1.93e-08;23!CL:0002559;4.35e-08;5!CL:0002579;5.28e-08;3!CL:0000057;5.94e-08;73!CL:0002615;9.76e-08;3!CL:0000197;3.65e-07;6!CL:0000098;3.65e-07;6!CL:0002167;3.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.47e-22,76;CL:0002334,3.30e-12,12;CL:0002580,7.15e-09,3;CL:0002620,1.38e-08,23;CL:0002559,3.31e-08,5;CL:0002579,5.51e-08,3;CL:0002615,6.83e-08,3;CL:0000197,3.45e-07,6;CL:0000098,3.45e-07,6;CL:0002167,3.45e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.69e-08;5!DOID:450;4.69e-08;5!DOID:66;4.69e-08;5!DOID:423;4.69e-08;5!DOID:0080000;4.69e-08;5!DOID:11722;4.69e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.39e-08,5;DOID:450,4.39e-08,5;DOID:66,4.39e-08,5;DOID:423,4.39e-08,5;DOID:0080000,4.39e-08,5;DOID:11722,4.39e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.48e-11!69;UBERON:0004872!2.37e-10!84;UBERON:0001981!5.60e-10!60;UBERON:0007500!5.60e-10!60;UBERON:0004537!5.60e-10!60;UBERON:0006965!5.60e-10!60;UBERON:0001986!2.54e-09!18;UBERON:0004638!2.54e-09!18;UBERON:0004852!2.54e-09!18;UBERON:0000487!3.70e-09!22;UBERON:0003102!4.71e-09!95;UBERON:0002049!9.68e-09!79;UBERON:0007798!9.68e-09!79;UBERON:0001637!2.43e-08!42;UBERON:0003509!2.43e-08!42;UBERON:0004572!2.43e-08!42;UBERON:0006914!3.12e-08!25;UBERON:0002097!5.14e-08!40;UBERON:0002199!8.50e-08!45;UBERON:0002416!8.50e-08!45;UBERON:0004923!3.12e-07!57;UBERON:0004871!4.59e-07!8;UBERON:0003914!6.43e-07!118;UBERON:0003688!6.95e-07!6;UBERON:0002358!6.95e-07!6;UBERON:0003684!6.95e-07!6;UBERON:0001178!6.95e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.55e-14;6!UBERON:0002358;4.55e-14;6!UBERON:0003684;4.55e-14;6!UBERON:0001178;4.55e-14;6!UBERON:0004457;4.12e-09;9!UBERON:0000042;4.12e-09;9!UBERON:0002073;4.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.33e-14,6;UBERON:0002358,3.33e-14,6;UBERON:0003684,3.33e-14,6;UBERON:0001178,3.33e-14,6;UBERON:0002097,2.60e-08,41;UBERON:0002073,3.31e-08,5;UBERON:0005086,3.31e-08,5;UBERON:0002199,3.96e-08,46;UBERON:0002416,3.96e-08,46;UBERON:0003102,3.23e-07,99 | |||
|phase1_expression=5.4503513781167,5.78071414505655,1.40954404095971,6.00439790118782,1.78784437770915,4.36169262050184,0,0,0,0.737201809504527,0.697801167972428,0.873765488520689,0.527533956456907,0.247532705920093,0.662794751455832,0.672325146451775,0,2.92124036154949,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,1.43846196161075,0,0,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.612167784741805,0,0,0,0,0,2.32167390902867,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0,0.50133791063589,0.869079113764942,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,2.09749718104953,1.92582629358047,0.208994966536811,0.775250277507987,0,0.66944122552934,2.01414658554573,0.760272105718513,4.14905497831888,1.10298924103761,0.81014194788176,0.267899184852239,0.898117490504679,0.112611480483322,0,0.949265659568129,0.732806975721629,0,0,0,4.96971951695318,0.886413581652058,1.05927344650575,1.72101972449288,0.354668382198357,0,1.06748995729705,4.19334832309172,0,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0.448346041655403,0,0.161872944368132,0.140450806702248,0,0,0,1.18800285728205,3.70900393917835,0,0,0.168336113954066,0,0,0.438977620880838,4.59731693698529,1.80285670687916,0.226864366320042,7.5343646989322,1.49490172172997,1.27159140695737,4.80145753735044,0.721367704669072,4.3798891807757,1.67505170698431,1.85653965465393,0.876933046450788,3.78650661366172,1.28869858099219,0.161646056818812,3.90510551768276,0.201504196455281,0.67824236924195,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,5.78916844373597,0,2.3218396401599,2.88751792667834,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.548751427043128,0,0.804231779293047,0,0,1.03993478527958,0,0,0,1.44366447761074,1.85194205030644,3.04406643575357,0,0,0,0,0,0,0.503946384596579,1.13420077793909,0.895585227028483,1.45316969256981,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,1.690605505112,1.06375246633948,8.32059495290929,0,1.41849132023278,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,4.57535895367776,6.78030157429215,3.78485796081443,2.34282829985426,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0.606255142892519,0,1.81434175997808,3.2254015016441,8.28694655755537,8.41980283299221,1.28139149255701,2.55853624533352,5.30817939773905,4.45254199334973,0.462629081407967,1.06537035187876,0.246381468041427,0.519254429183621,0.116210378459959,0,1.00253235151642,0.184161977871793,0.114814448164607,0.182091168006717,0.655622074797121,0,0,0,0,0,0,1.36074964221213,0.647747748306418,3.08454505380579,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0.413509717453592,0,0,0,0.267096106940212,0.165284915360978,0.576570202095319,1.02090169995667,0,0.464845549297286,1.88887408098384,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0.842516912477962,0,1.21856744815642,0,0.272999822815972,0.707027159768564,1.13008116620243,0,2.65375590096488,0,0,0,0.202910376962704,0.6196469961995,0,0,0.196498082026242,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,2.15252686335615,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0.0671834724867263,5.76479813667846,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,3.57814845749386,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0.233713309847224,0,0,0.754703705257725,1.77962244319307,0,0,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0,0.380805212168795,0,0,0,0.464033759878494,3.18476710958893,1.20008329398946,0.686791410365586,0,0,0,0,0.260994291965212,2.04035332961045,0.231522474323834,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,1.05802783107205,1.8374728641192,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0.808679663052368,0,0,0.198916222116275,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0.193373663920732,0,0,0.352894871715692,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,0,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0.202117188958219,0.217716747896961,0,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr15:39882120..39882131,- | |||
}} |
Latest revision as of 01:17, 25 July 2015
Short description: | p@chr15:39882120..39882131, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39882120..39882131, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.47e-22 | 76 |
preadipocyte | 3.30e-12 | 12 |
preadipocyte of the breast | 7.15e-09 | 3 |
skin fibroblast | 1.38e-08 | 23 |
hair follicle cell | 3.31e-08 | 5 |
omentum preadipocyte | 5.51e-08 | 3 |
adipocyte of omentum tissue | 6.83e-08 | 3 |
receptor cell | 3.45e-07 | 6 |
sensory epithelial cell | 3.45e-07 | 6 |
olfactory epithelial cell | 3.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.33e-14 | 6 |
peritoneum | 3.33e-14 | 6 |
abdominal cavity | 3.33e-14 | 6 |
visceral peritoneum | 3.33e-14 | 6 |
skin of body | 2.60e-08 | 41 |
hair follicle | 3.31e-08 | 5 |
hair follicle placode | 3.31e-08 | 5 |
integument | 3.96e-08 | 46 |
integumental system | 3.96e-08 | 46 |
surface structure | 3.23e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.39e-08 | 5 |
myotonic disease | 4.39e-08 | 5 |
muscle tissue disease | 4.39e-08 | 5 |
myopathy | 4.39e-08 | 5 |
muscular disease | 4.39e-08 | 5 |
myotonic dystrophy | 4.39e-08 | 5 |