FFCP PHASE1:Hg19::chr14:70180571..70180575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:70180571..70180575,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr14:70180571..70180575,+ | |||
|id=chr14:70180571..70180575,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.89e-27!76;CL:0000738!1.45e-25!140;CL:0002087!1.71e-24!119;CL:0002194!6.61e-23!63;CL:0000576!6.61e-23!63;CL:0000040!6.61e-23!63;CL:0000559!6.61e-23!63;CL:0002057!6.78e-23!42;CL:0002031!7.03e-23!124;CL:0000839!1.58e-22!70;CL:0002009!2.09e-21!65;CL:0000988!7.76e-21!182;CL:0000037!1.96e-20!172;CL:0000566!1.96e-20!172;CL:0000557!2.83e-20!71;CL:0000860!5.69e-20!45;CL:0002032!1.91e-19!165;CL:0000837!1.91e-19!165;CL:0000763!6.75e-16!112;CL:0000049!6.75e-16!112;CL:0002320!5.05e-12!365;CL:0000134!5.50e-11!358;CL:0000048!1.98e-10!430;CL:0000723!3.70e-10!436;CL:0000034!4.52e-09!444;CL:0002371!1.35e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-18;33!CL:0002057;1.26e-18;33!CL:0000473;1.45e-18;39!CL:0000234;1.45e-18;39!CL:0000576;7.43e-15;48!CL:0000766;7.60e-13;69!CL:0002087;3.88e-08;104!CL:0000738;3.11e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.48e-30,72;CL:0000738,6.16e-28,136;CL:0000473,4.81e-27,48;CL:0000234,4.81e-27,48;CL:0002087,1.07e-26,115;CL:0002194,7.90e-26,59;CL:0000576,7.90e-26,59;CL:0000040,7.90e-26,59;CL:0000559,7.90e-26,59;CL:0000839,3.35e-25,66;CL:0002031,4.38e-25,120;CL:0002009,2.50e-24,61;CL:0000860,2.43e-23,42;CL:0002057,2.43e-23,42;CL:0000557,4.11e-23,67;CL:0000988,6.87e-23,177;CL:0000037,2.11e-22,168;CL:0002032,2.40e-21,161;CL:0000837,2.40e-21,161;CL:0000763,9.14e-18,108;CL:0000049,9.14e-18,108;CL:0002320,6.22e-13,361;CL:0000134,7.65e-12,354;CL:0000048,3.99e-11,427;CL:0000723,8.76e-11,433;CL:0000034,8.24e-10,441;CL:0000219,8.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.02e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.10e-21!112;UBERON:0002390!1.97e-21!102;UBERON:0003061!1.97e-21!102;UBERON:0002371!3.11e-17!80;UBERON:0002405!3.07e-15!115;UBERON:0001474!1.09e-14!86;UBERON:0003081!1.74e-14!216;UBERON:0004765!1.06e-12!101;UBERON:0001434!1.06e-12!101;UBERON:0002204!1.28e-10!167;UBERON:0002384!2.40e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.51e-24,108;UBERON:0002390,3.39e-24,98;UBERON:0003061,3.39e-24,98;UBERON:0002371,6.64e-20,76;UBERON:0002405,1.48e-19,93;UBERON:0004765,7.21e-17,90;UBERON:0001474,1.12e-16,82;UBERON:0003081,2.77e-16,203;UBERON:0001434,2.29e-14,100;UBERON:0002204,7.71e-12,167;UBERON:0002384,2.00e-11,371;UBERON:0000926,4.98e-10,315;UBERON:0004120,4.98e-10,315;UBERON:0006603,4.98e-10,315 | |||
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| |||
|short_description=p@chr14:70180571..70180575,+ | |||
}} |
Latest revision as of 22:19, 24 July 2015
Short description: | p@chr14:70180571..70180575, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:70180571..70180575, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.48e-30 | 72 |
leukocyte | 6.16e-28 | 136 |
defensive cell | 4.81e-27 | 48 |
phagocyte | 4.81e-27 | 48 |
nongranular leukocyte | 1.07e-26 | 115 |
monopoietic cell | 7.90e-26 | 59 |
monocyte | 7.90e-26 | 59 |
monoblast | 7.90e-26 | 59 |
promonocyte | 7.90e-26 | 59 |
myeloid lineage restricted progenitor cell | 3.35e-25 | 66 |
hematopoietic lineage restricted progenitor cell | 4.38e-25 | 120 |
macrophage dendritic cell progenitor | 2.50e-24 | 61 |
classical monocyte | 2.43e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-23 | 42 |
granulocyte monocyte progenitor cell | 4.11e-23 | 67 |
hematopoietic cell | 6.87e-23 | 177 |
hematopoietic stem cell | 2.11e-22 | 168 |
hematopoietic oligopotent progenitor cell | 2.40e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-21 | 161 |
myeloid cell | 9.14e-18 | 108 |
common myeloid progenitor | 9.14e-18 | 108 |
connective tissue cell | 6.22e-13 | 361 |
mesenchymal cell | 7.65e-12 | 354 |
multi fate stem cell | 3.99e-11 | 427 |
somatic stem cell | 8.76e-11 | 433 |
stem cell | 8.24e-10 | 441 |
motile cell | 8.03e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.51e-24 | 108 |
hematopoietic system | 3.39e-24 | 98 |
blood island | 3.39e-24 | 98 |
bone marrow | 6.64e-20 | 76 |
immune system | 1.48e-19 | 93 |
skeletal element | 7.21e-17 | 90 |
bone element | 1.12e-16 | 82 |
lateral plate mesoderm | 2.77e-16 | 203 |
skeletal system | 2.29e-14 | 100 |
musculoskeletal system | 7.71e-12 | 167 |
connective tissue | 2.00e-11 | 371 |
mesoderm | 4.98e-10 | 315 |
mesoderm-derived structure | 4.98e-10 | 315 |
presumptive mesoderm | 4.98e-10 | 315 |