FFCP PHASE1:Hg19::chr14:60072110..60072126,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=100bp_to_ENST00000490111_5end | |||
|cluster_id=chr14:60072110..60072126,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_RTN1_5end | |||
|id=chr14:60072110..60072126,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.14e-15;3!UBERON:0006238;9.26e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.96e-51;20!UBERON:0002619;1.06e-46;22!UBERON:0000956;3.48e-41;25!UBERON:0000203;3.48e-41;25!UBERON:0002791;7.44e-38;32!UBERON:0001869;7.44e-38;32!UBERON:0003528;1.42e-32;34!UBERON:0002020;1.42e-32;34!UBERON:0001893;9.19e-32;34!UBERON:0000955;1.43e-22;68!UBERON:0002780;6.29e-21;41!UBERON:0001890;6.29e-21;41!UBERON:0001872;1.80e-20;5!UBERON:0002021;2.43e-20;5!UBERON:0001017;1.77e-19;75!UBERON:0000073;3.16e-18;53!UBERON:0002616;3.16e-18;53!UBERON:0000200;1.75e-17;6!UBERON:0001016;1.44e-16;83!UBERON:0001871;4.92e-15;6!UBERON:0002581;3.08e-12;1!UBERON:0001874;3.08e-12;1!UBERON:0002037;2.71e-08;6!UBERON:0002771;4.55e-07;2!UBERON:0002702;5.26e-07;2!UBERON:0001876;5.90e-07;2!UBERON:0011216;6.27e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,3.97659059106519,0.562677665642051,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,1.66982576691332,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,1.21637185924347,2.36438095162838,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,11.1043901060786,0.3755727921195,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,0.638535436228605,1.64093091392604,1.76450187355203,0.829887029570615,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0.781078098613847,1.65349437200947,0.570742291745161,4.92277328116398,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,1.38122824481983,0,0,0,1.09980912941201,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.611923411718232,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@RTN1 | |||
}} |
Latest revision as of 19:50, 24 September 2015
Short description: | p13@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RTN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 100bp_to_ENST00000490111_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data