FFCP PHASE1:Hg19::chr14:39735865..39735890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7057 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001wve.1_5end | |||
|cluster_id=chr14:39735865..39735890,+ | |||
|description=CAGE_peak_5_at_CTAGE5_5end | |||
|id=chr14:39735865..39735890,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.31e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.46e-08,12;CL:0000066,1.64e-07,253;CL:0000223,4.18e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.11e-08;13!UBERON:0003104;1.04e-07;31!UBERON:0004161;4.23e-07;11 | |||
|ontology_enrichment_disease=DOID:305!1.09e-10!106;DOID:0050687!1.93e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.68e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.09e-09!155;UBERON:0001555!9.09e-09!155;UBERON:0007026!9.09e-09!155;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0004921!1.50e-07!129;UBERON:0004185!1.50e-07!129;UBERON:0003929!2.14e-07!54;UBERON:0005911!9.96e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.11e-10;22!UBERON:0002423;1.68e-09;25!UBERON:0000160;3.69e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,7.20e-10,118;UBERON:0009497,1.12e-09,25;UBERON:0000015,1.12e-09,25;UBERON:0002423,1.12e-09,25;UBERON:0006235,1.12e-09,25;UBERON:0004161,1.12e-09,25;UBERON:0004119,1.80e-09,160;UBERON:0000925,1.80e-09,160;UBERON:0006595,1.80e-09,160;UBERON:0009854,1.97e-09,23;UBERON:0005911,4.65e-09,82;UBERON:0003929,5.32e-09,54;UBERON:0005409,6.71e-09,25;UBERON:0001007,7.54e-09,145;UBERON:0001555,7.54e-09,145;UBERON:0007026,7.54e-09,145;UBERON:0009856,9.73e-09,26;UBERON:0008835,1.13e-08,22;UBERON:0003894,1.13e-08,22;UBERON:0002417,1.33e-08,60;UBERON:0000916,1.33e-08,60;UBERON:0009569,3.15e-08,112;UBERON:0000160,3.63e-08,17;UBERON:0002100,4.03e-08,199;UBERON:0007499,5.05e-08,25 | |||
|phase1_expression=1.63510541343501,1.2846031433459,2.53717927372748,1.0007329835313,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,0.737201809504527,0,0.218441372130172,1.05506791291381,0.495065411840187,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,7.56492716904717,7.14275128214528,7.39881344348585,0.393364276848904,0.767658796194425,0.154816123316076,0,0.30120591877825,0,0.619737604642413,0.284338464974843,0.587200878669695,0,0,0.434021741431704,0.447830948479849,0.32389366601898,0.257575567634187,0.436194716338694,0,0,0,0.411167888021826,0.309706370895104,0,0,0,1.37898272294647,0.645484683583826,0,0.376484679085209,0.272906150057846,1.12361742222542,0.612167784741805,0.320929027076094,0,0,0,0.852449501065388,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0.633765858935825,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,0,0,0.263384084775077,0,0.393010762749165,0,0.334372990781356,0,0,0,0.445641827540694,0,0,0.270803863765016,0,0.130059347559878,0.493313713811028,0,0.289803085735052,0.296573126324121,0,0,1.13309342697566,0,0.68725489096526,0,0,0,0,0,0.255973222308837,0,0,0.821127996921047,0.201606743224732,0,0.289648807765598,7.31420598941885,2.01210257911091,0.383587685530591,0.361439152384566,0,1.01392563272577,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.527008714158756,3.66741411393595,0,0,0.97364218096405,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,0,0,0.208994966536811,1.29208379584664,1.77883131343355,2.00832367658802,0,0.760272105718513,0.488124115096339,1.10298924103761,0.81014194788176,1.25019619597712,2.2452937262617,0.900891843866578,0,1.89853131913626,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.506522046658319,1.72131935057184,0.860509862246441,0.354668382198357,1.68203280042692,1.06748995729705,0.24666754841716,0.933633106199299,0.942974704487816,0.653847612453835,0.756787138224657,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0.408308342509787,0.491337269247072,0.413303124703062,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.901428353439581,0.226864366320042,1.07633781413317,0.640672166455702,0.211931901159562,1.80054657650641,0.618315175430633,0.772921620136887,0.37223371266318,1.5189869901714,0.779496041289589,1.26216887122057,0.644349290496095,0.646584227275248,1.77504796258307,0.705264687593482,0.508681776931463,3.28543450377605,0.545492241181669,1.14721838155602,0.609868530647977,0.132529768321485,0.813357600086629,0.518305275076852,1.26160425437814,0.72995471815166,0,0,1.38134921352481,0,0,0.473227200159376,0.505754070234305,0.723033089650446,0.55146986366197,0.653638332277218,0.949082476444386,1.48314438976181,0.392442930250692,0,1.4763109092493,0,0.4115740113314,0,38.0265104465493,19.6565443335525,25.9947558939818,0,22.1379189377604,1.02940686179115,0.219500570817251,0,0.100528972411631,0.648119116109707,0,0,0,0.115930404975077,0.70445216541493,0.721832238805369,1.85194205030644,0.190254152234598,0,0,0,0.234004265139238,0.594524649154913,0.93733833986777,2.85569617938061,1.41775097242386,0.358234090811393,0.581267877027924,0.766765358330422,0,0.528290604079356,0.621984346622316,0.576479813667846,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.2933531432838,1.42198887333556,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0.57191197463259,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,2.29723871668228,0,1.30303176000821,0.821905290201534,1.25342674267927,0.672510863961164,0.591092280605782,0.646882724578552,0.513372145118994,0.76228387266739,0,0,0,0,0.749007023947182,0,0,0.36807447515742,1.00034104211935,0,1.45579603071565,2.49800584316026,1.41932173530541,0.35142424497814,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,0.521301686808497,0,0.343143423810856,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0.30239029332968,2.48107807818777,1.84154367945675,1.40330047216537,2.17836553734692,1.02341449813341,1.44768529029247,0,0.154209693802656,0.355123450626254,0.246381468041427,1.03850885836724,0.232420756919918,10.9982099128376,0.601519410909855,1.47329582297434,0.34444334449382,0.910455840033585,1.04899531967539,0.451199612907412,2.46449078734127,0,2.92278449306521,1.68882606228601,0,0.680374821106063,0.863663664408557,0,0,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0,0.976135183992909,10.8193062230108,1.64825036673018,0.82509499920588,0,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| |||
|short_description=p5@CTAGE5 | |||
}} |
Latest revision as of 00:32, 20 September 2015
Short description: | p5@CTAGE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTAGE5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001wve.1_5end |
EntrezGene: | CTAGE5 |
HGNC: | 7057 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.46e-08 | 12 |
epithelial cell | 1.64e-07 | 253 |
endodermal cell | 4.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 7.20e-10 | 118 |
epithelium of foregut-midgut junction | 1.12e-09 | 25 |
anatomical boundary | 1.12e-09 | 25 |
hepatobiliary system | 1.12e-09 | 25 |
foregut-midgut junction | 1.12e-09 | 25 |
septum transversum | 1.12e-09 | 25 |
endoderm-derived structure | 1.80e-09 | 160 |
endoderm | 1.80e-09 | 160 |
presumptive endoderm | 1.80e-09 | 160 |
digestive tract diverticulum | 1.97e-09 | 23 |
endo-epithelium | 4.65e-09 | 82 |
gut epithelium | 5.32e-09 | 54 |
gastrointestinal system | 6.71e-09 | 25 |
digestive system | 7.54e-09 | 145 |
digestive tract | 7.54e-09 | 145 |
primitive gut | 7.54e-09 | 145 |
sac | 9.73e-09 | 26 |
hepatic diverticulum | 1.13e-08 | 22 |
liver primordium | 1.13e-08 | 22 |
abdominal segment of trunk | 1.33e-08 | 60 |
abdomen | 1.33e-08 | 60 |
subdivision of trunk | 3.15e-08 | 112 |
intestine | 3.63e-08 | 17 |
trunk | 4.03e-08 | 199 |
epithelial sac | 5.05e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.68e-10 | 106 |