FFCP PHASE1:Hg19::chr14:38064572..38064584,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |||
|TSSclassifier=strong | |||
|UniProt=P55317 | |||
|association_with_transcript=-83bp_to_NM_004496,uc001wuf.2_5end | |||
|cluster_id=chr14:38064572..38064584,- | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_5_at_FOXA1_5end | |||
|id=chr14:38064572..38064584,- | |||
|ontology_enrichment_celltype=CL:0000066!6.79e-24!254;CL:0000223!2.00e-14!59;CL:0000181!8.59e-09!12;CL:0000417!8.59e-09!12;CL:0000668!8.59e-09!12;CL:0000414!8.59e-09!12;CL:0000412!8.59e-09!12;CL:0000182!8.59e-09!12;CL:0002076!2.00e-08!43;CL:0002231!8.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.20e-19;12!CL:0002563;1.47e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.31e-19,12;CL:0002563,1.27e-10,4;CL:0000223,1.46e-09,58;CL:0000066,1.77e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.60e-13;3!UBERON:0003353;1.60e-13;3!UBERON:0009497;8.02e-12;13!UBERON:0008425;2.53e-11;1!UBERON:0004161;2.85e-08;11!UBERON:0001041;9.84e-08;30!UBERON:0003104;1.76e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.54e-41!106;DOID:0050687!3.37e-32!143;DOID:162!2.66e-19!235;DOID:14566!1.49e-18!239;DOID:7!1.17e-10!39;DOID:5093!1.97e-10!4;DOID:1612!1.97e-10!4;DOID:299!4.23e-08!25;DOID:1749!1.19e-07!14;DOID:0050615!2.57e-07!16;DOID:3119!7.16e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.18e-38;4!DOID:1612;1.18e-38;4!DOID:7;9.41e-16;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.36e-39,4;DOID:1612,3.36e-39,4;DOID:7,1.06e-18,39;DOID:305,3.66e-13,106;DOID:0050687,3.27e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.93e-22!129;UBERON:0004185!2.93e-22!129;UBERON:0001007!1.29e-21!155;UBERON:0001555!1.29e-21!155;UBERON:0007026!1.29e-21!155;UBERON:0005911!2.35e-21!82;UBERON:0004119!1.14e-20!169;UBERON:0000925!1.14e-20!169;UBERON:0006595!1.14e-20!169;UBERON:0000077!1.61e-18!130;UBERON:0009569!4.55e-15!113;UBERON:0005153!1.90e-14!37;UBERON:0003929!7.79e-14!54;UBERON:0005177!1.09e-13!107;UBERON:0001041!1.48e-12!98;UBERON:0000344!2.40e-12!12;UBERON:0009497!3.39e-12!25;UBERON:0000015!3.39e-12!25;UBERON:0002423!3.39e-12!25;UBERON:0006235!3.39e-12!25;UBERON:0004161!3.39e-12!25;UBERON:0000466!7.35e-12!126;UBERON:0000065!1.46e-10!53;UBERON:0007499!1.50e-10!25;UBERON:0008947!1.86e-10!38;UBERON:0003258!1.86e-10!38;UBERON:0005157!2.44e-10!51;UBERON:0009856!4.99e-10!26;UBERON:0002048!9.61e-10!22;UBERON:0000117!9.61e-10!22;UBERON:0000171!9.61e-10!22;UBERON:0000170!9.61e-10!22;UBERON:0005597!9.61e-10!22;UBERON:0000118!9.61e-10!22;UBERON:0003104!1.29e-09!238;UBERON:0009142!1.29e-09!238;UBERON:0002100!1.84e-09!216;UBERON:0000915!3.25e-09!52;UBERON:0005178!3.60e-09!34;UBERON:0002224!3.60e-09!34;UBERON:0001004!4.92e-09!72;UBERON:0005181!8.27e-09!35;UBERON:0008835!1.71e-08!22;UBERON:0003894!1.71e-08!22;UBERON:0005172!4.16e-08!55;UBERON:0005173!4.16e-08!55;UBERON:0009854!5.04e-08!23;UBERON:0002294!1.74e-07!7;UBERON:0001173!1.74e-07!7;UBERON:0004912!1.74e-07!7;UBERON:0001046!2.15e-07!19;UBERON:0003350!2.72e-07!5;UBERON:0002417!6.98e-07!61;UBERON:0000916!6.98e-07!61;UBERON:0002110!8.90e-07!3;UBERON:0006242!8.90e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.17e-15;10!UBERON:0001443;2.96e-14;11!UBERON:0002423;3.17e-13;25!UBERON:0002107;2.21e-12;19!UBERON:0006925;2.21e-12;19!UBERON:0001242;1.47e-10;4!UBERON:0001262;1.47e-10;4!UBERON:0004786;1.47e-10;4!UBERON:0004808;1.47e-10;4!UBERON:0001277;1.47e-10;4!UBERON:0002365;2.03e-10;31!UBERON:0002330;2.03e-10;31!UBERON:0002530;6.17e-09;57!UBERON:0002367;2.16e-08;11!UBERON:0010147;2.16e-08;11!UBERON:0003937;9.85e-08;12!UBERON:0005399;9.85e-08;12!UBERON:0002368;8.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.36e-19,54;UBERON:0000310,7.18e-16,10;UBERON:0008835,3.99e-15,22;UBERON:0003894,3.99e-15,22;UBERON:0005911,8.90e-15,82;UBERON:0009854,1.89e-14,23;UBERON:0001443,1.89e-14,11;UBERON:0007499,2.90e-13,25;UBERON:0009497,2.90e-13,25;UBERON:0000015,2.90e-13,25;UBERON:0002423,2.90e-13,25;UBERON:0006235,2.90e-13,25;UBERON:0004161,2.90e-13,25;UBERON:0009856,9.74e-13,26;UBERON:0002107,2.32e-12,19;UBERON:0006925,2.32e-12,19;UBERON:0008836,2.32e-12,19;UBERON:0002530,7.87e-12,59;UBERON:0004921,2.26e-11,118;UBERON:0002365,1.14e-10,31;UBERON:0002330,1.14e-10,31;UBERON:0001242,1.27e-10,4;UBERON:0001262,1.27e-10,4;UBERON:0004786,1.27e-10,4;UBERON:0004808,1.27e-10,4;UBERON:0001277,1.27e-10,4;UBERON:0009569,2.47e-10,112;UBERON:0002100,1.10e-09,199;UBERON:0001007,7.02e-09,145;UBERON:0001555,7.02e-09,145;UBERON:0007026,7.02e-09,145;UBERON:0002367,2.45e-08,11;UBERON:0010147,2.45e-08,11;UBERON:0009846,2.45e-08,11;UBERON:0003353,2.45e-08,11;UBERON:0004902,2.45e-08,11;UBERON:0003820,2.45e-08,11;UBERON:0009847,2.45e-08,11;UBERON:0001046,3.14e-08,19;UBERON:0004119,7.42e-08,160;UBERON:0000925,7.42e-08,160;UBERON:0006595,7.42e-08,160;UBERON:0003937,1.11e-07,12;UBERON:0005399,1.11e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.18157981336281,0,2.45976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,0.200506470303285,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61119057208048,0,0,0,0,0,0,0,1.82299432759663,8.57107999962718,0,0.227586896570999,0.508507300585533,0,0,0,1.04174996959975,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0.216388639742091,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.60129367765797,1.24425829676697,0,0,0,0,0,0,0.867798691675654,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0,0,0,0.782205530939212,0.0801588202515337,0.426905989478705,0,0,0.916292769327325,0.343189995723929,0,0.49701014226173,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,1.26053091691558,1.40106959247983,1.48287796479207,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,1.26720403823288,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,1.24415452006595,0,0.107824811396682,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,1.4460082245969,1.02041020705668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0.467878926924211,6.76432635548652,0,0.45178432815584,0,0.603851374266694,0.154348316215889,0.437119121007915,0.470317296361523,0,0.942706188406504,0,0,0,0,0,0,0,0.535661815816973,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,1.2192774916755,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@FOXA1 | |||
}} |
Latest revision as of 23:26, 19 September 2015
Short description: | p5@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -83bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.31e-19 | 12 |
intestinal epithelial cell | 1.27e-10 | 4 |
endodermal cell | 1.46e-09 | 58 |
epithelial cell | 1.77e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.36e-39 | 4 |
breast cancer | 3.36e-39 | 4 |
disease of anatomical entity | 1.06e-18 | 39 |
carcinoma | 3.66e-13 | 106 |
cell type cancer | 3.27e-09 | 143 |