FFCP PHASE1:Hg19::chr14:36982935..36982943,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |||
|TSSclassifier=strong | |||
|UniProt=E5RG42 | |||
|association_with_transcript=36bp_to_ENST00000518446_5end | |||
|cluster_id=chr14:36982935..36982943,- | |||
|coexpression_cluster_id=C2293 | |||
|description=CAGE_peak_9_at_SFTA3_5end | |||
|id=chr14:36982935..36982943,- | |||
|ontology_enrichment_celltype=CL:0002553!3.27e-12!1;CL:0000082!2.72e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.54e-29;1!CL:0000082;3.38e-14;19!CL:0000322;8.57e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1;CL:0000082,3.31e-14,19;CL:0000322,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.16e-35;29!UBERON:0001041;4.55e-34;30!UBERON:0007123;6.39e-07;5 | |||
|ontology_enrichment_disease=DOID:3112!9.61e-12!1;DOID:1324!1.01e-11!15;DOID:3905!2.51e-11!9;DOID:0050615!5.32e-11!16;DOID:3908!1.20e-09!5;DOID:1325!5.34e-07!7;DOID:3904!5.34e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.02e-23;5!DOID:1324;9.02e-18;15!DOID:0050615;1.04e-16;16!DOID:3910;1.66e-15;2!DOID:3905;1.15e-13;9!DOID:4556;7.07e-11;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.02e-23,5;DOID:1324,8.77e-18,15;DOID:0050615,1.01e-16,16;DOID:3910,1.78e-15,2;DOID:3905,1.15e-13,9;DOID:4556,6.73e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.54e-34!5;UBERON:0004117!6.54e-34!5;UBERON:0007689!6.54e-34!5;UBERON:0007123!6.54e-34!5;UBERON:0003091!6.54e-34!5;UBERON:0002048!2.99e-23!22;UBERON:0000117!2.99e-23!22;UBERON:0000171!2.99e-23!22;UBERON:0000170!2.99e-23!22;UBERON:0005597!2.99e-23!22;UBERON:0000118!2.99e-23!22;UBERON:0005178!3.86e-19!34;UBERON:0002224!3.86e-19!34;UBERON:0005181!1.44e-18!35;UBERON:0005153!1.39e-17!37;UBERON:0008947!4.94e-17!38;UBERON:0003258!4.94e-17!38;UBERON:0005911!6.42e-17!82;UBERON:0009722!1.34e-15!11;UBERON:0007690!1.34e-15!11;UBERON:0005157!1.65e-12!51;UBERON:0000915!3.34e-12!52;UBERON:0002171!5.05e-12!1;UBERON:0006518!5.05e-12!1;UBERON:0008949!5.05e-12!1;UBERON:0000101!5.05e-12!1;UBERON:0002167!5.05e-12!1;UBERON:0000065!5.91e-12!53;UBERON:0008814!1.67e-11!15;UBERON:0001007!1.53e-09!155;UBERON:0001555!1.53e-09!155;UBERON:0007026!1.53e-09!155;UBERON:0004802!2.72e-09!19;UBERON:0000115!2.72e-09!19;UBERON:0004119!1.37e-08!169;UBERON:0000925!1.37e-08!169;UBERON:0006595!1.37e-08!169;UBERON:0001004!1.50e-08!72;UBERON:0002368!2.09e-07!35;UBERON:0001048!2.60e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;2.88e-46;22!UBERON:0000117;2.88e-46;22!UBERON:0000171;2.88e-46;22!UBERON:0000170;2.88e-46;22!UBERON:0002171;3.16e-29;1!UBERON:0006518;3.16e-29;1!UBERON:0008949;3.16e-29;1!UBERON:0000101;3.16e-29;1!UBERON:0002167;3.16e-29;1!UBERON:0005178;4.09e-26;34!UBERON:0002224;4.09e-26;34!UBERON:0005181;8.54e-23;35!UBERON:0000065;4.06e-17;44!UBERON:0004903;1.66e-15;2!UBERON:0002173;1.66e-15;2!UBERON:0002186;1.66e-15;2!UBERON:0004802;3.38e-14;19!UBERON:0000115;3.38e-14;19!UBERON:0004807;2.30e-12;22!UBERON:0000915;4.50e-12;52!UBERON:0004821;8.57e-11;3!UBERON:0007499;8.57e-11;3!UBERON:0003215;8.57e-11;3!UBERON:0010368;8.57e-11;3!UBERON:0009911;8.57e-11;3!UBERON:0002299;8.57e-11;3!UBERON:0006524;8.57e-11;3!UBERON:0008874;8.57e-11;3!UBERON:0002169;8.57e-11;3!UBERON:0004894;8.57e-11;3!UBERON:0001004;1.01e-09;65!UBERON:0009856;2.03e-08;4!UBERON:0005911;5.52e-07;36!UBERON:0002046;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.88e-46,22;UBERON:0000117,2.88e-46,22;UBERON:0000171,2.88e-46,22;UBERON:0000170,2.88e-46,22;UBERON:0005597,2.88e-46,22;UBERON:0000118,2.88e-46,22;UBERON:0005178,4.07e-30,34;UBERON:0002224,4.07e-30,34;UBERON:0005181,2.87e-29,35;UBERON:0002171,4.20e-29,1;UBERON:0006518,4.20e-29,1;UBERON:0008949,4.20e-29,1;UBERON:0000101,4.20e-29,1;UBERON:0002167,4.20e-29,1;UBERON:0005153,1.04e-27,37;UBERON:0008947,5.41e-27,38;UBERON:0003258,5.41e-27,38;UBERON:0005157,6.66e-22,47;UBERON:0000915,7.83e-20,52;UBERON:0000065,4.12e-19,54;UBERON:0005911,4.16e-17,82;UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0004802,3.31e-14,19;UBERON:0000115,3.31e-14,19;UBERON:0001004,4.96e-14,74;UBERON:0001041,5.68e-12,87;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0005177,2.42e-10,101;UBERON:0004807,7.13e-10,28;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0009569,2.41e-09,112;UBERON:0001048,7.33e-09,160;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0004921,8.36e-09,118;UBERON:0002046,6.39e-07,5;UBERON:0004117,6.39e-07,5;UBERON:0007689,6.39e-07,5;UBERON:0007123,6.39e-07,5;UBERON:0003091,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64641480685389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38823636338003,4.24451623769098,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0.897054900644907,1.2729431655633,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@SFTA3 | |||
}} |
Latest revision as of 22:20, 19 September 2015
Short description: | p9@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SFTA3_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | 36bp_to_ENST00000518446_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | E5RG42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.33e-29 | 1 |
epithelial cell of lung | 3.31e-14 | 19 |
pneumocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.02e-23 | 5 |
lung cancer | 8.77e-18 | 15 |
respiratory system cancer | 1.01e-16 | 16 |
lung adenocarcinoma | 1.78e-15 | 2 |
lung carcinoma | 1.15e-13 | 9 |
lung large cell carcinoma | 6.73e-11 | 3 |