FFCP PHASE1:Hg19::chr14:25501778..25501809,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:25501778..25501809,- | |||
|description=CAGE_peak_at_chr14:25501778..25501809,- | |||
|id=chr14:25501778..25501809,- | |||
|ontology_enrichment_celltype=CL:0000542!8.66e-10!53;CL:0000051!8.66e-10!53;CL:0000838!4.03e-09!52;CL:0000163!4.91e-09!9;CL:0000945!1.26e-08!24;CL:0000826!1.26e-08!24;CL:0002274!5.94e-08!5;CL:0000457!5.94e-08!5;CL:0002191!5.94e-08!5;CL:0000097!5.94e-08!5;CL:0000831!5.94e-08!5;CL:0002028!5.94e-08!5;CL:0000066!1.84e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.22e-15;5!CL:0000945;3.64e-13;24!CL:0000163;1.20e-11;9!CL:0002563;2.13e-07;4!CL:0002253;7.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.29e-15,5;CL:0002028,2.29e-15,5;CL:0000945,3.71e-13,24;CL:0000826,3.71e-13,24;CL:0000163,1.19e-11,9;CL:0000542,5.54e-09,53;CL:0000051,5.54e-09,53;CL:0000838,5.52e-08,52;CL:0002563,2.09e-07,4;CL:0002253,7.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.16e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.79e-31!235;DOID:0050687!1.64e-30!143;DOID:14566!3.74e-30!239;DOID:305!1.07e-29!106;DOID:0050686!2.34e-12!137;DOID:299!7.13e-09!25;DOID:1324!9.37e-08!15;DOID:0050615!4.23e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:299;6.17e-12;25!DOID:0060058;8.47e-11;10!DOID:3493;6.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.60e-21,235;DOID:14566,4.27e-20,239;DOID:0050687,9.75e-16,143;DOID:305,2.03e-15,106;DOID:299,6.86e-12,25;DOID:0050686,5.81e-11,137;DOID:0060058,7.71e-11,10;DOID:2531,7.35e-08,51;DOID:0060083,7.35e-08,51;DOID:3493,7.69e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.13e-07;4!UBERON:0001262;2.13e-07;4!UBERON:0004786;2.13e-07;4!UBERON:0004808;2.13e-07;4!UBERON:0001277;2.13e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.09e-07,4;UBERON:0001262,2.09e-07,4;UBERON:0004786,2.09e-07,4;UBERON:0004808,2.09e-07,4;UBERON:0001277,2.09e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2760554243136,14.6960055115403,14.5614945430307,0,0.383829398097213,0,0,0,0,8.44392486325288,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,1.20460095262218,0.511946444617674,0,0.473554504088034,0,0,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0.482022059766964,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,13.5287282397425,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,4.0502279646084,8.9151089682532,8.35895729818376,23.2286077504539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.747768497892312,0,0,1.30062222588003,0,0,0.637705090915289,0,0,0,0,0,0,1.72347885350326,0,0,0,0,0,0.687010689511529,0,0,0.333698283423817,0,1.11362469558097,1.23087398947712,0.540911356951966,0.66614393599564,0,10.4798702628603,0,0.121360521749513,5.79505598242887,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,4.4310529965985,0,0.449341755736634,8.05595286040241,0.511572370226872,0,0,0,0,0,0,0,2.18649999990489,0,5.68967241427498,1.27126825146383,4.49136595359079,0,0,0,0,0,0,0.110579259931225,0,0,6.42736934762042,4.46155981691531,0.153900517007594,0,0.23056390438806,0.0897576444097721,2.17294743844016,0.31900115973192,0,0,2.04386596391473,0,0,0,0,0,2.27704479269022,0,0,15.3438839669599,4.09923907158428,4.760550074326,0,0,0,0,0,0,0,0,0,12.7718352450966,0,0,0,0,0,0,0.901940516486955,0,0,0,0.313932918407225,0,22.4841541363536,0.832048038078832,0,0.0979923974143777,0.957651272384428,0.17472666824203,0.343972064943233,3.87025325156341,3.21592995179216,3.85942648150083,0,0,0,7.40026393092455,0,0,0,0.0801588202515337,0,0.999048047910651,3.74635084600676,0,0.171594997861965,0,0,0.235694034616795,0.815425236441684,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35101732456571,9.14816028030948,8.62765361333567,0.0984274815147488,8.89069986690737,0,0,0.160753148465019,0.275078873194468,0,0,0,0,2.68347750079413,1.02447419488958,0.104909176269996,0.211200673038813,0.35857467866569,0,0,0,0,0,0,0,0,1.23138781124008,0,0.113312091520126,0.293104467356165,0,0,0,1.19760786519031,0.704815022316672,0,0,0.828478110694391,0,4.54506753365272,22.7752158972275,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,2.70350199629091,0,0,0,24.282312132175,1.70254786070051,0,0,0,0,0,0,9.61044816089722,0,0,0,0,0,0.0788617450012534,21.6154102037077,0,0,0,0,0,0,0,0,0,0,14.4277146196508,0.471878893390961,0,0,0,0.690359926060101,0,0,0,0,0,2.12903492763126,1.18284868973636,0,0.781078098613847,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,0.0887023701626388,1.03710588800201,0,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0.9555033757741,0,0,5.23086414156564,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,8.24461962368041,3.16986604953901,0,0,0,0,0,0,0,0,0.549702583727146,0.301925687133347,0,0,0.470317296361523,0,3.77082475362602,0,0,0,0,0,0,10.9935271517422,1.96409332466223,0.352894871715692,0.401206833445841,0,0,0,0,0,0,0,0,0,0,1.13549782351571,0,22.6790316810472,0.101988829741982,0.801652215796681,0.827054095813604,0,1.89446745545599,3.21556956187414,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.673520530145875,0.215166616178029,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,1.28227396921293 | |||
|short_description=p@chr14:25501778..25501809,- | |||
}} |
Latest revision as of 19:59, 24 July 2015
Short description: | p@chr14:25501778..25501809, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:25501778..25501809, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.29e-15 | 5 |
basophil mast progenitor cell | 2.29e-15 | 5 |
lymphocyte of B lineage | 3.71e-13 | 24 |
pro-B cell | 3.71e-13 | 24 |
endocrine cell | 1.19e-11 | 9 |
lymphocyte | 5.54e-09 | 53 |
common lymphoid progenitor | 5.54e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.52e-08 | 52 |
intestinal epithelial cell | 2.09e-07 | 4 |
epithelial cell of large intestine | 7.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.09e-07 | 4 |
wall of intestine | 2.09e-07 | 4 |
gastrointestinal system mucosa | 2.09e-07 | 4 |
gastrointestinal system epithelium | 2.09e-07 | 4 |
intestinal epithelium | 2.09e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.60e-21 | 235 |
disease of cellular proliferation | 4.27e-20 | 239 |
cell type cancer | 9.75e-16 | 143 |
carcinoma | 2.03e-15 | 106 |
adenocarcinoma | 6.86e-12 | 25 |
organ system cancer | 5.81e-11 | 137 |
lymphoma | 7.71e-11 | 10 |
hematologic cancer | 7.35e-08 | 51 |
immune system cancer | 7.35e-08 | 51 |
signet ring cell adenocarcinoma | 7.69e-07 | 2 |