FFCP PHASE1:Hg19::chr8:145701030..145701041,-: Difference between revisions
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|id=chr8:145701030..145701041,-
|short_description=p3@FOXH1
|description=CAGE_peak_3_at_FOXH1_5end
|association_with_transcript=164bp_to_ENST00000525197_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8928 | |EntrezGene=8928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3814 | |HGNC=3814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000525197_5end | |||
|cluster_id=chr8:145701030..145701041,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_3_at_FOXH1_5end | |||
|id=chr8:145701030..145701041,- | |||
|ontology_enrichment_celltype=CL:0002322!5.87e-62!5;CL:0000039!4.12e-29!7;CL:0000586!4.12e-29!7;CL:0000540!2.20e-19!6;CL:0000031!2.20e-19!6;CL:0000404!2.20e-19!6;CL:0000047!1.06e-14!8;CL:0000148!7.00e-12!10;CL:0000541!7.00e-12!10;CL:0000147!1.21e-08!14;CL:0000133!4.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.07e-57;5!CL:0000039;1.09e-41;7!CL:0000586;1.09e-41;7!CL:0002321;1.68e-19;15!CL:0000148;8.11e-17;10!CL:0000540;5.76e-13;6!CL:0000404;5.76e-13;6!CL:0000147;3.31e-12;14!CL:0000710;1.00e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.80e-57,5;CL:0000039,1.49e-41,7;CL:0000586,1.49e-41,7;CL:0000148,8.57e-17,10;CL:0000541,8.57e-17,10;CL:0000540,4.52e-13,6;CL:0000031,4.52e-13,6;CL:0000404,4.52e-13,6;CL:0000147,3.45e-12,14;CL:0000047,4.84e-10,8;CL:0000710,1.03e-08,20;CL:0000133,1.84e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.36e-29;10!UBERON:0005564;2.36e-29;10!CL:0000031;5.76e-13;6 | |||
|ontology_enrichment_disease=DOID:3095!4.65e-20!22;DOID:2994!4.65e-20!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.39e-13;22!DOID:2994;1.39e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.54e-13,22;DOID:2994,1.54e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.59e-25!8;UBERON:0003135!1.16e-18!11;UBERON:0000991!7.04e-15!21;UBERON:0009196!7.04e-15!21;UBERON:0009117!7.04e-15!21;UBERON:0005564!7.04e-15!21;UBERON:0004176!3.34e-14!22;UBERON:0003101!1.84e-09!22;UBERON:0000079!1.84e-09!22;UBERON:0002323!9.48e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.49e-36;8!UBERON:0003135;9.86e-27;11!UBERON:0000922;2.79e-16;49!UBERON:0000991;3.27e-14;21!UBERON:0003101;1.39e-13;22!UBERON:0000079;1.39e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.97e-36,8;UBERON:0003135,1.20e-26,11;UBERON:0000991,3.63e-14,21;UBERON:0009196,3.63e-14,21;UBERON:0009117,3.63e-14,21;UBERON:0005564,3.63e-14,21;UBERON:0004176,1.54e-13,22;UBERON:0003101,1.54e-13,22;UBERON:0000079,1.54e-13,22 | |||
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|short_description=p3@FOXH1 | |||
}} | }} |
Latest revision as of 02:08, 17 September 2015
Short description: | p3@FOXH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXH1_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 164bp_to_ENST00000525197_5end |
EntrezGene: | FOXH1 |
HGNC: | 3814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.80e-57 | 5 |
germ line cell | 1.49e-41 | 7 |
germ cell | 1.49e-41 | 7 |
melanocyte | 8.57e-17 | 10 |
melanoblast | 8.57e-17 | 10 |
neuron | 4.52e-13 | 6 |
neuroblast | 4.52e-13 | 6 |
electrically signaling cell | 4.52e-13 | 6 |
pigment cell | 3.45e-12 | 14 |
neuronal stem cell | 4.84e-10 | 8 |
neurecto-epithelial cell | 1.03e-08 | 20 |
neurectodermal cell | 1.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.97e-36 | 8 |
male reproductive organ | 1.20e-26 | 11 |
gonad | 3.63e-14 | 21 |
indifferent external genitalia | 3.63e-14 | 21 |
indifferent gonad | 3.63e-14 | 21 |
gonad primordium | 3.63e-14 | 21 |
external genitalia | 1.54e-13 | 22 |
male organism | 1.54e-13 | 22 |
male reproductive system | 1.54e-13 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.54e-13 | 22 |
germ cell cancer | 1.54e-13 | 22 |