FFCP PHASE1:Hg19::chr13:45781036..45781049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:45781036..45781049,+ | |||
|coexpression_cluster_id=C2265 | |||
|description=CAGE_peak_at_chr13:45781036..45781049,+ | |||
|id=chr13:45781036..45781049,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.83e-09!254;CL:0002076!9.35e-09!43;CL:0000076!3.37e-08!62;CL:0002321!7.66e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.03e-13;42!CL:0002166;1.00e-11;3!CL:0002573;2.78e-11;2!CL:0002621;2.78e-11;3!CL:0002368;1.27e-09;13!CL:0002159;3.99e-09;14!CL:0002327;1.11e-08;4!CL:0000312;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.81e-13,42;CL:0002166,1.03e-11,3;CL:0002573,2.04e-11,2;CL:0002621,2.93e-11,3;CL:0002368,1.42e-09,13;CL:0000223,2.20e-09,58;CL:0002159,3.78e-09,14;CL:0002327,1.16e-08,4;CL:0000066,1.38e-08,253;CL:0000312,5.15e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.40e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.35e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.06e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.44e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.78e-11;3!UBERON:0003729;9.09e-10;13!UBERON:0001708;5.22e-09;4!UBERON:0008895;5.22e-09;4!UBERON:0003343;9.37e-09;4!UBERON:0004785;9.37e-09;4!UBERON:0001911;1.11e-08;4!UBERON:0011159;2.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.93e-11,3;UBERON:0003729,1.03e-09,13;UBERON:0001708,5.32e-09,4;UBERON:0008895,5.32e-09,4;UBERON:0003343,1.12e-08,4;UBERON:0004785,1.12e-08,4;UBERON:0001911,1.16e-08,4;UBERON:0005333,1.16e-08,4;UBERON:0008425,1.16e-08,4;UBERON:0005311,1.16e-08,4;UBERON:0011159,2.31e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.410623275218653,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.378139268656271,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0,0.966304265816484,2.45471508531751,1.14721838155602,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.53650399572076,0,1.10581869652794,0.555530670951178,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0.93733833986777,7.22323151255096,3.1190521393325,2.05984602216551,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,1.01346914667305,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,3.40860999515584,0.644566922551274,0,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,2.31398881505369,1.15314040419064,1.02090169995667,0.2023155617111,0,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,1.25088746543166,0,0,0,0.86101074534246,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0.281338832821026,0,0,0,0,0,0,6.64746436264006,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,1.48000651186684,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.411125773940253,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0.0607495566580247,0.335434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,8.93677760878255,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0.999843263696853,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0,0,0.406870733204662,0.181848659202559,0,0,0,1.20008329398946,0,0,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.389720617678777,0,0,0,0.245772908753719,0,0,0,0,0,0,0.979156554036111,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,4.2203518955441,0.11796972334774,1.10057159113007,0.693153996902029,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.638812138197976,0,0,0,0.91064876540519,0,0,0.857440047187092,0.0679697329768317,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,1.53831600949735,2.04512171421978,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.71421575442263,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0.248298857183432,0,0,0,0,0,0,0,0,0.407016343054873,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:45781036..45781049,+ | |||
}} |
Latest revision as of 16:15, 24 July 2015
Short description: | p@chr13:45781036..45781049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45781036..45781049, + |
Coexpression cluster: | C2265_Mallassezderived_astrocytoma_Prostate_malignant_oral_Gingival_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.81e-13 | 42 |
epithelial cell of Malassez | 1.03e-11 | 3 |
Schwann cell | 2.04e-11 | 2 |
gingival epithelial cell | 2.93e-11 | 3 |
respiratory epithelial cell | 1.42e-09 | 13 |
endodermal cell | 2.20e-09 | 58 |
general ecto-epithelial cell | 3.78e-09 | 14 |
mammary gland epithelial cell | 1.16e-08 | 4 |
epithelial cell | 1.38e-08 | 253 |
keratinocyte | 5.15e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.93e-11 | 3 |
mouth mucosa | 1.03e-09 | 13 |
jaw skeleton | 5.32e-09 | 4 |
splanchnocranium | 5.32e-09 | 4 |
mucosa of oral region | 1.12e-08 | 4 |
respiratory system mucosa | 1.12e-08 | 4 |
mammary gland | 1.16e-08 | 4 |
mammary bud | 1.16e-08 | 4 |
mammary ridge | 1.16e-08 | 4 |
mammary placode | 1.16e-08 | 4 |
primary subdivision of cranial skeletal system | 2.31e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.06e-13 | 14 |