FFCP PHASE1:Hg19::chr13:29012385..29012399,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:29012385..29012399,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:29012385..29012399,- | |||
|id=chr13:29012385..29012399,- | |||
|ontology_enrichment_celltype=CL:0002057!1.14e-13!42;CL:0000860!3.05e-12!45;CL:0002194!1.50e-09!63;CL:0000576!1.50e-09!63;CL:0000040!1.50e-09!63;CL:0000559!1.50e-09!63;CL:0002009!5.12e-09!65;CL:0000839!7.85e-08!70;CL:0000557!1.29e-07!71;CL:0000766!3.07e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.76e-22;3!CL:0000860;4.08e-13;33!CL:0002057;4.08e-13;33!CL:0000473;1.12e-10;39!CL:0000234;1.12e-10;39!CL:0000576;7.66e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.47e-22,3;CL:0000860,5.17e-12,42;CL:0002057,5.17e-12,42;CL:0000473,2.46e-10,48;CL:0000234,2.46e-10,48;CL:0002194,5.46e-08,59;CL:0000576,5.46e-08,59;CL:0000040,5.46e-08,59;CL:0000559,5.46e-08,59;CL:0002009,1.10e-07,61;CL:0000839,5.20e-07,66;CL:0000557,6.91e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-09;42!UBERON:0003124;1.41e-08;1!UBERON:0005754;3.56e-08;1!UBERON:0003099;3.56e-08;1!UBERON:0003852;3.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.86e-23!115;UBERON:0001049!1.67e-10!57;UBERON:0005068!1.67e-10!57;UBERON:0006241!1.67e-10!57;UBERON:0007135!1.67e-10!57;UBERON:0002780!4.82e-09!41;UBERON:0001890!4.82e-09!41;UBERON:0006240!4.82e-09!41;UBERON:0002616!6.90e-09!59;UBERON:0002020!9.80e-09!34;UBERON:0003528!9.80e-09!34;UBERON:0002308!1.00e-08!9;UBERON:0000125!1.00e-08!9;UBERON:0003080!1.08e-08!42;UBERON:0001017!1.40e-08!82;UBERON:0001893!2.15e-08!34;UBERON:0000955!2.83e-08!69;UBERON:0006238!2.83e-08!69;UBERON:0002791!6.85e-08!33;UBERON:0005743!8.66e-08!86;UBERON:0003075!2.19e-07!86;UBERON:0007284!2.19e-07!86;UBERON:0001869!3.85e-07!32;UBERON:0000468!7.36e-07!659;UBERON:0009663!9.28e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.76e-22;3!UBERON:0000920;3.76e-22;3!UBERON:0005631;9.64e-12;10!UBERON:0000158;9.64e-12;10!UBERON:0000998;3.56e-08;1!UBERON:0002171;3.56e-08;1!UBERON:0005705;3.56e-08;1!UBERON:0006868;3.56e-08;1!UBERON:0008193;3.56e-08;1!UBERON:0010912;3.56e-08;1!UBERON:0006518;3.56e-08;1!UBERON:0008949;3.56e-08;1!UBERON:0002514;3.56e-08;1!UBERON:0003457;3.56e-08;1!UBERON:0008907;3.56e-08;1!UBERON:0008001;3.56e-08;1!UBERON:0007213;3.56e-08;1!UBERON:0009891;3.56e-08;1!UBERON:0007914;3.56e-08;1!UBERON:0007375;3.56e-08;1!UBERON:0003323;3.56e-08;1!UBERON:0010258;3.56e-08;1!UBERON:0000101;3.56e-08;1!UBERON:0005253;3.56e-08;1!UBERON:0007842;3.56e-08;1!UBERON:0002167;3.56e-08;1!UBERON:0002397;3.56e-08;1!UBERON:0003113;3.56e-08;1!UBERON:0003277;3.56e-08;1!UBERON:0001709;3.56e-08;1!UBERON:0002244;3.56e-08;1!UBERON:0005620;3.56e-08;1!UBERON:0010364;3.56e-08;1!UBERON:0004288;3.56e-08;1!UBERON:0000478;2.54e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.47e-22,3;UBERON:0003124,9.31e-17,7;UBERON:0005631,8.73e-13,14;UBERON:0000158,8.73e-13,14;UBERON:0000998,3.83e-08,1;UBERON:0006868,3.83e-08,1;UBERON:0002171,4.72e-08,1;UBERON:0006518,4.72e-08,1;UBERON:0008949,4.72e-08,1;UBERON:0000101,4.72e-08,1;UBERON:0002167,4.72e-08,1;UBERON:0005705,5.82e-08,1;UBERON:0008193,5.82e-08,1;UBERON:0010912,5.82e-08,1;UBERON:0002514,5.82e-08,1;UBERON:0003457,5.82e-08,1;UBERON:0008907,5.82e-08,1;UBERON:0008001,5.82e-08,1;UBERON:0007213,5.82e-08,1;UBERON:0009891,5.82e-08,1;UBERON:0007914,5.82e-08,1;UBERON:0009292,5.82e-08,1;UBERON:0003099,5.82e-08,1;UBERON:0007375,5.82e-08,1;UBERON:0003323,5.82e-08,1;UBERON:0010258,5.82e-08,1;UBERON:0007842,5.82e-08,1;UBERON:0009494,5.82e-08,1;UBERON:0010042,5.82e-08,1;UBERON:0010045,5.82e-08,1;UBERON:0010259,5.82e-08,1;UBERON:0010359,5.82e-08,1;UBERON:0009526,5.82e-08,1;UBERON:0002397,5.82e-08,1;UBERON:0003113,5.82e-08,1;UBERON:0003277,5.82e-08,1;UBERON:0001709,5.82e-08,1;UBERON:0004066,5.82e-08,1;UBERON:0002244,5.82e-08,1;UBERON:0005620,5.82e-08,1;UBERON:0004362,5.82e-08,1;UBERON:0010364,5.82e-08,1;UBERON:0010046,5.82e-08,1;UBERON:0005868,5.82e-08,1;UBERON:0007238,5.82e-08,1;UBERON:0004288,5.82e-08,1;UBERON:0004068,5.82e-08,1;UBERON:0010334,5.82e-08,1;UBERON:0003852,5.82e-08,1;UBERON:0010253,5.82e-08,1;UBERON:0000478,2.35e-07,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13362783106643,0,0.464858073811369,0.411167888021826,0.309706370895104,0.575384784644301,0,0.709446689665756,1.37898272294647,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.306083892370903,1.92557416245656,0.639337125799041,0.329851300186716,0.398927315243264,0,2.32167390902867,0.56738522469114,1.24564449799115,1.25624332628372,2.08593167368081,0.434377689410233,0.605399502633369,0.736555271975129,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,1.6507082516404,0.626984899610432,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.446498641420399,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.538168907066586,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.608731130888112,0.30982349809975,0.845086807596724,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,4.53614521001611,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.552896299656123,0,0,0,0,0.153900517007594,0,0,0,0,23.925086979894,1.64875668123352,115.135511620025,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,1.80784592624426,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0.199679000498991,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0.482259445395058,0.137539436597234,2.07720169014593,0,0,0.0607495566580247,0,0.236417121897595,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,1.3223260174269,0,0,0,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0.327872630709804,0,0,2.19647276823534,0.500763722825999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,1.05802783107205,0,0,0,1.27707087245721,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,0,0,0,0.606965604236632,0,2.12885688390333,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0.8453114551668,0.169927114687817,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0.213233981900981,0,0,0.0620747142958579,0,0.25458863311266,0.606351566874658,0.435433495793923,0.342233301085281,0.0673520530145875,0.143444410785353,0.665320713092027,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p@chr13:29012385..29012399,- | |||
}} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29012385..29012399, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29012385..29012399, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.47e-22 | 3 |
classical monocyte | 5.17e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.17e-12 | 42 |
defensive cell | 2.46e-10 | 48 |
phagocyte | 2.46e-10 | 48 |
monopoietic cell | 5.46e-08 | 59 |
monocyte | 5.46e-08 | 59 |
monoblast | 5.46e-08 | 59 |
promonocyte | 5.46e-08 | 59 |
macrophage dendritic cell progenitor | 1.10e-07 | 61 |
myeloid lineage restricted progenitor cell | 5.20e-07 | 66 |
granulocyte monocyte progenitor cell | 6.91e-07 | 67 |