FFCP PHASE1:Hg19::chr13:24144532..24144589,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11915 | |||
|TSSclassifier=strong | |||
|UniProt=B4E2I6,Q9NS68 | |||
|association_with_transcript=23bp_to_ENST00000248484,NM_001204459,NM_148957_5end | |||
|cluster_id=chr13:24144532..24144589,+ | |||
|description=CAGE_peak_2_at_TNFRSF19_5end | |||
|id=chr13:24144532..24144589,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.17e-08!23;CL:0000148!6.29e-08!10;CL:0000541!6.29e-08!10;CL:0000055!1.24e-07!180;CL:0000147!6.63e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.94e-11;10!CL:0002620;2.84e-09;23!CL:0000710;2.80e-07;20!CL:0000147;3.77e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.28e-11,10;CL:0000541,4.28e-11,10;CL:0002620,2.62e-09,23;CL:0000710,2.67e-07,20;CL:0000147,3.98e-07,14;CL:0000133,6.83e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.79e-07;5!DOID:450;9.79e-07;5!DOID:66;9.79e-07;5!DOID:423;9.79e-07;5!DOID:0080000;9.79e-07;5!DOID:11722;9.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.45e-07,5;DOID:450,9.45e-07,5;DOID:66,9.45e-07,5;DOID:423,9.45e-07,5;DOID:0080000,9.45e-07,5;DOID:11722,9.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-13!115;UBERON:0005743!2.09e-11!86;UBERON:0001017!5.65e-11!82;UBERON:0004121!9.04e-11!169;UBERON:0000073!1.22e-10!94;UBERON:0001016!1.22e-10!94;UBERON:0000475!2.47e-10!365;UBERON:0000924!3.51e-10!173;UBERON:0006601!3.51e-10!173;UBERON:0003075!4.93e-09!86;UBERON:0007284!4.93e-09!86;UBERON:0000062!6.90e-09!511;UBERON:0000955!1.38e-08!69;UBERON:0006238!1.38e-08!69;UBERON:0002346!3.07e-08!90;UBERON:0000153!4.31e-08!129;UBERON:0007811!4.31e-08!129;UBERON:0000033!4.80e-08!123;UBERON:0002199!7.19e-08!45;UBERON:0002416!7.19e-08!45;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0002097!1.47e-07!40;UBERON:0000481!1.68e-07!347;UBERON:0002780!5.52e-07!41;UBERON:0001890!5.52e-07!41;UBERON:0006240!5.52e-07!41;UBERON:0002616!6.69e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.65e-09,46;UBERON:0002416,9.65e-09,46;UBERON:0002097,7.04e-08,41;UBERON:0011216,9.50e-08,223 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,5.06599756336621,0,0,0,0,0,0,1.73272894144065,0.994192127183747,0,0,0,0,0,0,0,7.72837165253853,2.73748850145768,4.14290710662849,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0,0.579386075843295,0.795285947051099,2.91980922181582,1.98523116044542,6.20842312895179,2.19586964232815,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,1.72667283892012,0.622422070799533,0.269421344139376,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0.23486899728753,0.971237666208789,0.842704840213491,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,4.82875382968922,1.5324389789951,3.00476117813194,0.567160915800105,7.89314397030993,12.1727711626583,4.4505699243508,7.50227740211006,9.89304280689013,9.53269998168828,11.353128236227,6.75105328965065,2.43592512902997,14.6411589061586,12.5187862153527,2.90962902273861,47.2162758047097,19.6466591543899,5.25637836162512,0,0,0,0.853815942907168,0.132529768321485,2.44007280025989,5.07939169575315,1.26160425437814,0.72995471815166,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,1.22988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.463721619900307,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0,0.37872730027914,36.447791323705,17.1894791501225,4.68869788840188,3.4214489204541,8.02054443085923,27.9319043794843,14.5771480641595,0.224262168690721,0,0,0.387815147273333,0,0,14.360658295583,8.32059495290929,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,17.53252907135,5.20559415430487,3.09315525111078,2.51274398001523,2.55175500661265,0,0,0,1.96306386750624,1.00034104211935,2.98391526069709,0,0,0.157702415033935,0,6.92176029373754,0,1.03473071292505,0.664225598535437,6.45292089895961,6.95068915744663,0.195801157462741,2.40200396667599,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,1.69630663182921,1.77561725313127,3.77784917663522,1.03850885836724,0.697262270759755,2.05461064305758,0,0,0.229628896329213,5.28064387219479,1.96686622439136,0,0.0770153371044148,0.784349769176855,0,0.73886140225013,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,1.64865618636356,2.47237555009527,2.22775649785588,0,0,0,0.773365746336976,0,0,0.137836572484531,0.322260734604821,0.870100163485371,0.0852266274161009,0.801288320820636,0,0,0,0,0,0.94443704049192,0,0,0,0.869932992075073,0.18532421910392,0,0,0.632758849437452,0.571890581771475,0,0.855877976067841,0,0,1.79872457583315,0.274537029736055,0.589062011728432,0,0,0,0.975267478179181,0,0,5.05049672209547,0.424216295861138,0,0,0,0,0.578775534266688,1.31178950409327,0.608731130888112,0,0,0,0,1.07001315444375,2.48332744849418,0.422215270595328,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0,0,0,0,0,0.970884173996107,0.222886768554957,5.96685908293468,0,0,0,0,0.422008249231538,0,0,0,3.98495976502139,0.552567831062295,0,23.7263343404999,0.369254416383208,0.311039587661807,0,0,0,0.591860433821602,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0,0,0,0.325942115766024,0,7.7857954391583,0,0,0,0,0,0,0,0,0.317873157960757,0,0,1.69623685720729,9.7374887883941,0.995261931078505,0.530745387020035,3.05515072466813,0,0,0,1.07841812769083,4.81546588379273,0.468528891450678,0,0,0,4.3404284313433,1.20990716048664,3.36680037793539,0.821425535170343,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.969890164884194,0,4.51961481561065,0,0,0.696418755514666,0,0,1.06726497369676,4.59562102038899,0,1.03082936549324,0.171594997861965,0,0,0,1.08723364858891,0.627617077873999,0,6.93481415763645,0,0.273810757783986,0,0.859530882839914,0,42.1716425921104,20.3952777370398,6.46085722119133,31.1499240778426,65.6715853648953,11.3817443295355,60.2635748205935,0,4.65983798109815,7.01170322534291,4.36804049420182,7.00996856083523,0,0.0846733320657845,1.59045937961861,0.136203406111576,0,0,0,0,0.77380195455795,0.607495566580247,0,0.157611414598396,1.15400093896996,0,36.5746172239003,0,27.1584224021879,5.29673576292345,0,0,0.864221491201268,0.653174720218818,0,0.574647645245373,3.40776043570843,0,0,0,0.258565912723101,0.52893040697076,0,0,1.28144895081234,12.2619357977739,3.72815149812476,0,0,0,0,0,0,0,0,2.35581144375351,0,0.244052529803926,0,1.14681839138014,1.10929051536852,1.42821726765182,0.276697269872462,0,11.9802802857902,86.4959960641251,0,0,0.869526171664951,0.597019211547496,0.233713309847224,0.554805861502613,9.65955326902955,21.6348395507215,18.6860356535273,0,0.151230923763239,0,0.295710299979268,0.318593534327405,0,1.55262956876259,0.414706207840855,1.86089200190596,3.1304703708704,0,0,2.03435366602331,1.27294061441792,2.57785336901972,0,0.398095888698616,2.00013882331577,2.74716564146234,1.6837474438296,0,1.34833881285112,0,18.7915890214952,2.26705925512272,1.389134845943,0,5.90993175568908,0.617602894321944,8.77136198314828,0,0,0,0.512483037175893,0,0,0.138258436151731,0.584580926518165,0,0.163565394255844,0,0,0,0,0,0,0,0.736423801007363,0,0,0.511577485214607,0,0,3.49470842214445,0.169732529954025,0,0,0,0,0,7.20513673456923,2.1160556621441,0,0.578063025868136,0,0.638535436228605,0.41023272848151,3.02486035466062,0.345786262321089,0.645902582527404,1.42769420259154,0,0,0,0,0,0,1.39241355481392,0.601682626794058,0,0,0,2.12903492763126,0.887136517302272,0.742913430802341,0,1.03343398250592,0.19024743058172,3.28184885410932,27.9611461097163,1.48863353516788,0,0.127762427639595,2.67850917939143,6.05310699993883,5.46269043812968,3.87025725297206,0.620916591138472,0.230467975111559,0,0.40781839786099,0.460409414939944,0,0,1.72684804271131,0.157115589916002,0,2.73947616152849,0.215927591218621,0,6.36141243172241,0.94808167039636,0,1.04314963381548,5.61197955311177,0,0,0,58.941148158378,0.118332000730565,0,4.23387050190929,0,0,0,0,0.687051635306701,0,0,0.821302454849976,3.4794432940146,22.8284166737796,0,18.90032364033,0.594600453887843,11.181662121857,28.694474870557,6.34043942980029,0.540219106755613,1.31135736302374,0,1.22574160876953,0,1.57046773691956,1.18818560130834,11.4117046447518,0,0.657887425858975,0.45120521581504,0,0,0,0,1.46067277649303,44.0380112068359,2.86679166302903,4.1020606170228,0.339957450954573,2.61810414204226,1.0580536810308,4.83593523616777,0,0,0.630832124175395,0,9.2489905738349,0,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,5.33084954752452,2.3806443146374,0,0.248298857183432,0,0.0636471582781649,0,2.39488422686657,9.92476573147315,0.404112318087525,8.75010905790652,14.3043953314786,0,0,0,0,28.1569130884145,0.733448665097199,7.73102738799903,0,0.201273793591026,7.37307532297436 | |||
|short_description=p2@TNFRSF19 | |||
}} |
Latest revision as of 20:52, 16 September 2015
Short description: | p2@TNFRSF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF19_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000248484, NM_001204459, NM_148957_5end |
EntrezGene: | TNFRSF19 |
HGNC: | 11915 |
UniProt: | B4E2I6Q9NS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.28e-11 | 10 |
melanoblast | 4.28e-11 | 10 |
skin fibroblast | 2.62e-09 | 23 |
neurecto-epithelial cell | 2.67e-07 | 20 |
pigment cell | 3.98e-07 | 14 |
neurectodermal cell | 6.83e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
integument | 9.65e-09 | 46 |
integumental system | 9.65e-09 | 46 |
skin of body | 7.04e-08 | 41 |
organ system subdivision | 9.50e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.45e-07 | 5 |
myotonic disease | 9.45e-07 | 5 |
muscle tissue disease | 9.45e-07 | 5 |
myopathy | 9.45e-07 | 5 |
muscular disease | 9.45e-07 | 5 |
myotonic dystrophy | 9.45e-07 | 5 |