FFCP PHASE1:Hg19::chr13:110959598..110959611,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2203 | |||
|TSSclassifier=strong | |||
|UniProt=P08572 | |||
|association_with_transcript=-2bp_to_ENST00000360467,ENST00000480771_5end | |||
|cluster_id=chr13:110959598..110959611,+ | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_2_at_COL4A2_5end | |||
|id=chr13:110959598..110959611,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.21e-18!119;CL:0000055!7.75e-16!180;CL:0000220!8.33e-12!246;CL:0002321!1.08e-11!248;CL:0000183!1.60e-09!59;CL:0000213!1.89e-09!57;CL:0000215!1.89e-09!57;CL:1000449!2.10e-09!16;CL:0002078!2.51e-09!44;CL:0000115!7.53e-09!35;CL:0002139!2.44e-08!24;CL:1000497!7.62e-08!18;CL:0002518!7.62e-08!18;CL:0000680!8.59e-08!57;CL:0000056!8.59e-08!57;CL:0000355!8.59e-08!57;CL:0000057!1.38e-07!75;CL:0002681!1.48e-07!13;CL:0002584!1.48e-07!13;CL:0000187!2.18e-07!54;CL:1000507!4.52e-07!12;CL:1000494!4.52e-07!12;CL:0000192!5.24e-07!42;CL:0000514!5.24e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.12e-09;15!CL:0002139;1.82e-08;24!CL:0000115;4.82e-08;36!CL:1000497;5.18e-08;17!CL:0002518;5.18e-08;17!CL:0002681;8.75e-08;12!CL:0002584;8.75e-08;12!CL:1000507;5.89e-07;10!CL:1000494;5.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.56e-18,121;CL:0002321,1.15e-11,250;CL:1000449,1.17e-09,15;CL:0002078,1.26e-09,45;CL:0000213,1.45e-09,58;CL:0000215,1.45e-09,58;CL:0000115,2.13e-09,36;CL:0002139,1.97e-08,24;CL:0000057,3.63e-08,76;CL:1000497,4.93e-08,17;CL:0002518,4.93e-08,17;CL:0000680,8.62e-08,58;CL:0000056,8.62e-08,58;CL:0000355,8.62e-08,58;CL:0002681,9.06e-08,12;CL:0002584,9.06e-08,12;CL:0000187,2.21e-07,55;CL:0000192,5.64e-07,43;CL:0000514,5.64e-07,43;CL:1000507,5.94e-07,10;CL:1000494,5.94e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.42e-18!79;UBERON:0007798!3.42e-18!79;UBERON:0003914!6.62e-18!118;UBERON:0004872!6.09e-16!84;UBERON:0001009!1.95e-15!113;UBERON:0004535!1.36e-14!110;UBERON:0000055!3.04e-14!69;UBERON:0000477!1.14e-13!286;UBERON:0000119!2.52e-13!312;UBERON:0000468!5.26e-13!659;UBERON:0005256!9.26e-13!143;UBERON:0000483!1.54e-12!309;UBERON:0000481!1.20e-11!347;UBERON:0001981!2.55e-11!60;UBERON:0007500!2.55e-11!60;UBERON:0004537!2.55e-11!60;UBERON:0006965!2.55e-11!60;UBERON:0003103!2.65e-11!69;UBERON:0004111!3.23e-11!241;UBERON:0000475!4.32e-11!365;UBERON:0000490!5.51e-10!138;UBERON:0002100!7.80e-10!216;UBERON:0004876!1.39e-09!20;UBERON:0006555!1.91e-09!17;UBERON:0005103!1.91e-09!17;UBERON:0000083!1.91e-09!17;UBERON:0009201!1.91e-09!17;UBERON:0004819!1.91e-09!17;UBERON:0006553!1.91e-09!17;UBERON:0003074!1.91e-09!17;UBERON:0003060!1.91e-09!17;UBERON:0004211!2.10e-09!16;UBERON:0001285!2.10e-09!16;UBERON:0007684!2.10e-09!16;UBERON:0003220!2.10e-09!16;UBERON:0004208!2.10e-09!16;UBERON:0000080!2.15e-09!18;UBERON:0002120!2.15e-09!18;UBERON:0004875!2.15e-09!18;UBERON:0005721!2.15e-09!18;UBERON:0005754!2.15e-09!18;UBERON:0007297!2.15e-09!18;UBERON:0000467!2.85e-09!625;UBERON:0003887!3.08e-09!21;UBERON:0002385!3.72e-09!63;UBERON:0001015!3.72e-09!63;UBERON:0000383!3.72e-09!63;UBERON:0000480!4.75e-09!626;UBERON:0000353!6.12e-09!17;UBERON:0001134!6.90e-09!61;UBERON:0002036!6.90e-09!61;UBERON:0003082!6.90e-09!61;UBERON:0003886!6.99e-09!63;UBERON:0003104!1.85e-08!238;UBERON:0009142!1.85e-08!238;UBERON:0000025!2.47e-08!194;UBERON:0003064!5.98e-08!37;UBERON:0001225!1.48e-07!13;UBERON:0008987!1.48e-07!13;UBERON:0002553!1.98e-07!70;UBERON:0000914!2.21e-07!83;UBERON:0002329!2.21e-07!83;UBERON:0003077!2.21e-07!83;UBERON:0003059!2.21e-07!83;UBERON:0007282!2.21e-07!83;UBERON:0009618!2.21e-07!83;UBERON:0007285!2.21e-07!83;UBERON:0000486!2.23e-07!82;UBERON:0004290!3.24e-07!70;UBERON:0007100!4.35e-07!27;UBERON:0009773!4.52e-07!12;UBERON:0001231!4.52e-07!12;UBERON:0004810!4.52e-07!12;UBERON:0002417!9.37e-07!61;UBERON:0000916!9.37e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.12e-09;15!UBERON:0004819;1.12e-09;15!UBERON:0001285;1.12e-09;15!UBERON:0007684;1.12e-09;15!UBERON:0000353;1.92e-08;15!UBERON:0002049;7.55e-08;75!UBERON:0007798;7.55e-08;75!UBERON:0003914;8.61e-08;74!UBERON:0001225;8.75e-08;12!UBERON:0008987;8.75e-08;12!UBERON:0000055;3.00e-07;65!UBERON:0007100;4.17e-07;25!UBERON:0004211;5.89e-07;10!UBERON:0009773;5.89e-07;10!UBERON:0001231;5.89e-07;10!UBERON:0004810;5.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.73e-18,117;UBERON:0002049,1.32e-17,78;UBERON:0007798,1.32e-17,78;UBERON:0001009,2.70e-15,112;UBERON:0004872,3.07e-15,83;UBERON:0004535,1.91e-14,109;UBERON:0000055,1.09e-13,68;UBERON:0003104,3.09e-13,160;UBERON:0009142,3.09e-13,160;UBERON:0000119,1.50e-11,309;UBERON:0003103,2.31e-11,68;UBERON:0000483,8.10e-11,306;UBERON:0007500,9.86e-11,59;UBERON:0001981,9.86e-11,59;UBERON:0004537,9.86e-11,59;UBERON:0006965,9.86e-11,59;UBERON:0007503,5.66e-10,78;UBERON:0004111,7.83e-10,240;UBERON:0006555,1.11e-09,16;UBERON:0004819,1.11e-09,16;UBERON:0004211,1.17e-09,15;UBERON:0009773,1.17e-09,15;UBERON:0001231,1.17e-09,15;UBERON:0001285,1.17e-09,15;UBERON:0007684,1.17e-09,15;UBERON:0004208,1.17e-09,15;UBERON:0005256,1.18e-09,122;UBERON:0002100,1.73e-09,199;UBERON:0002385,3.65e-09,64;UBERON:0001015,3.65e-09,64;UBERON:0000383,3.65e-09,64;UBERON:0000490,4.65e-09,148;UBERON:0001134,6.82e-09,62;UBERON:0002036,6.82e-09,62;UBERON:0003082,6.82e-09,62;UBERON:0000353,1.84e-08,15;UBERON:0001225,9.06e-08,12;UBERON:0008987,9.06e-08,12;UBERON:0000486,2.83e-07,83;UBERON:0002329,2.96e-07,71;UBERON:0003059,2.96e-07,71;UBERON:0007282,2.96e-07,71;UBERON:0004290,2.96e-07,71;UBERON:0009618,2.96e-07,71;UBERON:0007100,3.66e-07,27;UBERON:0007524,3.77e-07,73;UBERON:0003077,4.98e-07,72;UBERON:0007285,4.98e-07,72;UBERON:0000025,5.19e-07,192;UBERON:0004810,5.94e-07,10 | |||
|phase1_expression=15.6243406172679,26.5484649624819,26.3584735659466,18.0131937035635,25.4767823823554,13.9574163856059,78.5229622321763,6.31719873426831,48.3193412169701,43.2491728242656,33.4944560626765,9.82986174585775,20.8375912800478,4.95065411840187,6.95934489028623,8.0679017574213,8.43772339233568,5.84248072309899,8.29485757943862,5.66356867153224,8.97603041474713,15.6727360739044,10.5907315238491,9.58120975510189,29.7536055839683,0,0,0,0,0,0.154816123316076,0,1.204823675113,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,3.35350429851818,36.9522803727803,3.97583067623023,16.0428131403485,8.25625158076695,3.9764297352555,9.73269740605272,6.23929793282848,15.0775990274543,18.7088093526358,10.6093051153147,6.55731518926576,5.56176664176644,0,0,0,0,0,0,8.54678351676832,3.4409383804245,18.0513060835949,5.6530794192401,19.7164735018656,28.612276361767,17.3465822225553,26.6169261944409,28.8170672776235,75.6468584848155,58.8130802979355,26.6095237001479,188.659970484735,10.6622293300302,95.5967498500476,7.32257771929454,14.1453504754487,17.116945033465,7.66583187329416,7.59412527654503,18.1369726491103,0,0,7.41359888642308,61.6245220102195,20.6407734013265,11.2547803691236,21.512746556161,3.19201543978521,21.86642640555,41.6321083345849,143.807180727204,18.3614510885862,31.2528759201676,19.1250426642747,68.5649147231539,81.2408053516798,3.74914290934075,4.68240115245481,4.56377457235559,3.88566569434683,1.52664848236894,1.13311061057692,1.26405726032024,2.04154171254893,2.94802361548243,6.40619843289746,7.12801714369232,27.9411630084769,18.2032272387605,40.9612340835256,2.18836948140286,5.12985931475053,2.21651292387346,4.82875382968922,15.937365381549,32.4514207238249,39.4743997396873,16.3244568476864,13.6676728843883,11.0204588602972,17.4052835728953,5.87399416659102,27.0522567047911,10.9808945235638,53.5020973204814,15.3950468154694,17.9227979713321,7.64014158731085,4.84938170456436,22.0105947360301,8.7654325458047,14.243089754081,3.47869535693934,10.6370987030426,6.30970109855808,3.17131635936948,2.91565490307268,5.57730925773688,6.63430752098371,5.80337957013945,1.45990943630332,0,3.21620469096443,2.76269842704961,0.928735856063958,0,4.49565840151407,3.37169380156203,4.33819853790268,4.41175890929576,5.88274499049497,3.55905928666645,3.37078270400411,1.96221465125346,2.69323009862473,38.3840836404817,105.181330352584,34.5722169518376,30.8718293909638,0,0.982827216677626,5.90789906681404,0,0,16.2989419783599,1.42675371031213,1.1240175325762,4.12168786887686,6.11083738046295,1.62904152655162,2.07986957055916,8.6598805215164,20.4037512756135,156.270972027879,140.901653014808,70.3737979116448,91.892755529311,0,0,0,0,0,1.87467667973554,18.6460162300734,5.81277898693785,3.40322386270824,2.3250715081117,13.8017764499476,0,0,0.414656231081544,0.144119953416961,0,8.19122836368981,5.34783795781589,3.51652341630141,10.2643467613623,8.43185440167253,6.60754727256618,4.0015700568281,26.2386737368144,34.4408454378291,17.2344971679233,25.2079845727667,35.7656445851882,39.729229370132,80.8451874418006,41.6029747645464,5.65856223376713,1.41849132023278,5.86128793835419,51.9010116979076,71.083430306279,37.0458151551346,31.922146060786,63.9705507736582,32.4700267902706,14.7705294759197,22.6598699236076,36.0902498167226,0,0,0,44.3305982659428,37.9044388252576,5.70547620162874,8.68687840005475,10.2738161275192,14.6829989856714,0,0,0,0,5.08189248444927,7.8083912314573,3.86644406388848,4.35542289869307,1.91381625495949,0,0,0,17.4221918241179,10.5035809422532,2.98391526069709,29.9478040604362,18.3781858461077,19.23969463414,14.1741112141183,3.61135319673263,40.9333507300773,17.5904221197258,33.8755055253073,14.7495334833363,4.08352987999989,154.682914395565,82.3544217146054,0,0,0,0.303127571446259,8.32177197552485,5.74541557326393,5.70647957983187,51.2562990782129,15.436305193819,11.4043842837574,15.3512174720011,47.934468500795,16.325987308949,1.69630663182921,4.79416658345443,1.72467027628999,8.82732529612156,1.16210378459959,0,17.0430499757792,0.644566922551274,8.38145471601629,12.3821994244568,10.7522020266728,59.1071492908709,46.7483096223798,90.9845732245152,67.2240433404999,58.3700507777603,53.4546905133214,21.0916194542879,76.6501502162595,246.763604304463,57.1696983217529,126.927512785278,17.5864628401076,19.1147482053607,44.9988256991578,0,0,5.64190275256056,25.9131570102768,1.95227036798582,19.680833224715,0,0,17.8022316778813,7.80072295243825,20.8889108797407,2.80345083047154,4.62145851343933,6.14014698904518,6.753992051742,5.04875150880886,10.151168573996,10.994234936677,7.47869099432594,6.61139661443912,19.0268166691455,24.246415373971,7.28336022159959,0.464845549297286,15.740617341532,4.8792608911242,8.00887308457831,7.98459045475533,1.73986598415015,15.7525586238332,14.1693637874571,26.0510858551767,56.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| |||
|short_description=p2@COL4A2 | |||
}} |
Latest revision as of 12:40, 16 September 2015
Short description: | p2@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL4A2_5end |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | -2bp_to_ENST00000360467, ENST00000480771_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | P08572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.56e-18 | 121 |
embryonic cell | 1.15e-11 | 250 |
epithelial cell of nephron | 1.17e-09 | 15 |
meso-epithelial cell | 1.26e-09 | 45 |
lining cell | 1.45e-09 | 58 |
barrier cell | 1.45e-09 | 58 |
endothelial cell | 2.13e-09 | 36 |
endothelial cell of vascular tree | 1.97e-08 | 24 |
fibroblast | 3.63e-08 | 76 |
kidney cell | 4.93e-08 | 17 |
kidney epithelial cell | 4.93e-08 | 17 |
muscle precursor cell | 8.62e-08 | 58 |
myoblast | 8.62e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.62e-08 | 58 |
kidney cortical cell | 9.06e-08 | 12 |
renal cortical epithelial cell | 9.06e-08 | 12 |
muscle cell | 2.21e-07 | 55 |
smooth muscle cell | 5.64e-07 | 43 |
smooth muscle myoblast | 5.64e-07 | 43 |
kidney tubule cell | 5.94e-07 | 10 |
nephron tubule epithelial cell | 5.94e-07 | 10 |