FFCP PHASE1:Hg19::chr13:110802669..110802680,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1282 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2202 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_M10941_5end | |||
|cluster_id=chr13:110802669..110802680,- | |||
|description=CAGE_peak_10_at_COL4A1_5end | |||
|id=chr13:110802669..110802680,- | |||
|ontology_enrichment_celltype=CL:0000057!4.86e-09!75;CL:0000055!9.90e-09!180;CL:0005020!8.41e-07!6;CL:0002138!8.41e-07!6;CL:0005022!8.41e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002615;7.20e-13;3!CL:0002144;7.20e-13;3!CL:0002617;7.46e-09;2!CL:0002188;6.08e-08;5!CL:0000136;1.65e-07;13!CL:0002579;9.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,8.95e-13,3;CL:0002615,1.01e-12,3;CL:0002617,1.82e-09,2;CL:0002188,5.20e-08,5;CL:0000115,2.02e-07,36;CL:0002579,9.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.87e-11!79;UBERON:0007798!4.87e-11!79;UBERON:0004535!8.88e-11!110;UBERON:0001009!1.04e-10!113;UBERON:0000055!8.96e-09!69;UBERON:0003914!1.10e-08!118;UBERON:0004872!4.15e-08!84;UBERON:0003886!4.70e-08!63;UBERON:0003688!9.59e-08!6;UBERON:0002358!9.59e-08!6;UBERON:0003684!9.59e-08!6;UBERON:0001178!9.59e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.42e-17;6!UBERON:0002358;2.42e-17;6!UBERON:0003684;2.42e-17;6!UBERON:0001178;2.42e-17;6!UBERON:0010523;7.20e-13;3!UBERON:0001915;7.20e-13;3!UBERON:0001982;7.20e-13;3!UBERON:0004457;1.86e-11;9!UBERON:0000042;1.86e-11;9!UBERON:0005284;1.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.24e-17,6;UBERON:0002358,3.24e-17,6;UBERON:0003684,3.24e-17,6;UBERON:0001178,3.24e-17,6;UBERON:0010523,8.95e-13,3;UBERON:0001915,8.95e-13,3;UBERON:0001982,8.95e-13,3;UBERON:0004457,1.91e-08,12;UBERON:0000042,1.91e-08,12;UBERON:0005284,1.27e-07,5 | |||
|phase1_expression=1.99846217197612,1.49870366723688,2.39622486963151,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.775250277507987,1.42306505074684,1.00416183829401,1.20848795132744,2.28081631715554,1.22031028774085,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,2.1349799145941,1.48000529050296,0.311211035399766,0.404132016209064,0.490385709340376,1.66493170409425,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0.30648779579902,0.45071417671979,0.794025282120147,0.179389635688862,0.213557388818567,0.635795703478686,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,1.26216887122057,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.6437217193015,1.15493158208859,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.560655421726804,1.30788020649984,0.66004457238855,0.775630294546667,0,0.845302752556,2.39344304926383,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0.699810938274399,0,0,0,0.958499421966331,1.14861935834114,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.356857977594324,0.157702415033935,0,0,0,0,1.32845119707087,0,0.0868836144680828,1.37060810223918,0.686286847621712,0,0,0,0,0,0,0.496215615637554,1.2276957863045,1.12264037773229,0.896974044789907,2.04682899626681,2.89537058058494,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.308061348417659,0,0,1.16106791782163,1.13733384070897,0.170093705276516,1.51141141271498,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0,1.116475108079,0.316379424718726,1.14378116354295,0,0.42793898803392,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0,1.32687795048244,0.876901770507525,1.15755106853338,0,1.01455188481352,0.30982349809975,0.563391205064483,0.143411352204052,0.294747123039363,0.35667105148125,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.359030577639089,0.108647371922008,0,1.09917112082235,1.06606955203727,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,1.22206028986725,0,0.370691816839509,0.313265848516366,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.446342914883745,0.335917362433631,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0.570930667089935,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0,1.14241563650639,0.406870733204662,0.363697318405119,0.322231671127465,0,2.3885753321917,0,0,0,0,0,0,0,0.226705925512272,0,0,0,1.23520578864389,0,0,0.192914038270915,0,1.02496607435179,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0.102662806856247,2.3196288626764,2.4285549652957,0,0,0,0,0,0,0.154348316215889,0.655678681511872,0,0.24514832175390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| |||
|short_description=p10@COL4A1 | |||
}} |
Latest revision as of 12:17, 16 September 2015
Short description: | p10@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_M10941_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 8.95e-13 | 3 |
adipocyte of omentum tissue | 1.01e-12 | 3 |
adipocyte of breast | 1.82e-09 | 2 |
glomerular endothelial cell | 5.20e-08 | 5 |
endothelial cell | 2.02e-07 | 36 |
omentum preadipocyte | 9.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.24e-17 | 6 |
peritoneum | 3.24e-17 | 6 |
abdominal cavity | 3.24e-17 | 6 |
visceral peritoneum | 3.24e-17 | 6 |
microcirculatory vessel | 8.95e-13 | 3 |
endothelium of capillary | 8.95e-13 | 3 |
capillary | 8.95e-13 | 3 |
cavity lining | 1.91e-08 | 12 |
serous membrane | 1.91e-08 | 12 |
brain vasculature | 1.27e-07 | 5 |