FFCP PHASE1:Hg19::chr13:107210517..107210602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25482 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-474bp_to_ENST00000472226_5end | |||
|cluster_id=chr13:107210517..107210602,- | |||
|description=CAGE_peak_2_at_ARGLU1_5end | |||
|id=chr13:107210517..107210602,- | |||
|ontology_enrichment_celltype=CL:0000542!6.70e-09!53;CL:0000051!6.70e-09!53;CL:0000838!1.69e-08!52;CL:0002087!6.38e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.76e-10,53;CL:0000051,5.76e-10,53;CL:0000838,1.60e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.24e-12!235;DOID:14566!7.98e-12!239;DOID:0050686!2.34e-09!137;DOID:0050687!7.71e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-10,235;DOID:14566,8.02e-10,239;DOID:0050686,3.29e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.94e-12!57;UBERON:0005068!2.94e-12!57;UBERON:0006241!2.94e-12!57;UBERON:0007135!2.94e-12!57;UBERON:0002780!5.04e-11!41;UBERON:0001890!5.04e-11!41;UBERON:0006240!5.04e-11!41;UBERON:0000073!6.35e-11!94;UBERON:0001016!6.35e-11!94;UBERON:0002020!1.41e-10!34;UBERON:0003528!1.41e-10!34;UBERON:0003080!1.46e-10!42;UBERON:0001017!1.79e-10!82;UBERON:0000955!3.30e-10!69;UBERON:0006238!3.30e-10!69;UBERON:0005743!1.43e-09!86;UBERON:0002616!1.75e-09!59;UBERON:0002791!6.37e-09!33;UBERON:0001869!2.73e-08!32;UBERON:0007023!2.80e-08!115;UBERON:0001893!2.88e-08!34;UBERON:0002346!3.09e-07!90;UBERON:0005409!3.11e-07!35;UBERON:0002619!4.16e-07!22;UBERON:0000956!5.62e-07!25;UBERON:0000203!5.62e-07!25;UBERON:0003075!8.31e-07!86;UBERON:0007284!8.31e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.30e-09;34!UBERON:0002020;7.30e-09;34!UBERON:0002791;8.55e-09;32!UBERON:0002780;1.51e-08;41!UBERON:0001890;1.51e-08;41!UBERON:0001869;8.05e-08;32!UBERON:0000922;3.70e-07;49!UBERON:0002619;5.14e-07;22!UBERON:0000956;6.24e-07;25!UBERON:0000203;6.24e-07;25!UBERON:0001893;7.05e-07;34!UBERON:0000073;7.60e-07;53!UBERON:0002616;7.60e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.32e-12,56;UBERON:0005068,1.32e-12,56;UBERON:0006241,1.32e-12,56;UBERON:0007135,1.32e-12,56;UBERON:0001016,5.01e-12,89;UBERON:0000073,4.90e-11,53;UBERON:0002616,4.90e-11,53;UBERON:0002780,8.79e-11,41;UBERON:0001890,8.79e-11,41;UBERON:0003080,8.79e-11,41;UBERON:0006240,8.79e-11,41;UBERON:0001017,1.72e-10,81;UBERON:0000955,2.10e-10,68;UBERON:0006238,2.10e-10,68;UBERON:0003528,2.72e-10,34;UBERON:0002020,2.72e-10,34;UBERON:0002791,3.73e-09,32;UBERON:0002346,5.34e-08,86;UBERON:0001869,5.74e-08,32;UBERON:0001893,6.98e-08,34;UBERON:0003075,2.20e-07,82;UBERON:0007284,2.20e-07,82;UBERON:0007023,3.08e-07,114;UBERON:0002619,9.57e-07,22 | |||
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| |||
|short_description=p2@ARGLU1 | |||
}} |
Latest revision as of 10:28, 16 September 2015
Short description: | p2@ARGLU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARGLU1_5end |
Coexpression cluster: | NA |
Association with transcript: | -474bp_to_ENST00000472226_5end |
EntrezGene: | ARGLU1 |
HGNC: | 25482 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.76e-10 | 53 |
common lymphoid progenitor | 5.76e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.60e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.32e-12 | 56 |
neural rod | 1.32e-12 | 56 |
future spinal cord | 1.32e-12 | 56 |
neural keel | 1.32e-12 | 56 |
nervous system | 5.01e-12 | 89 |
regional part of nervous system | 4.90e-11 | 53 |
regional part of brain | 4.90e-11 | 53 |
regional part of forebrain | 8.79e-11 | 41 |
forebrain | 8.79e-11 | 41 |
anterior neural tube | 8.79e-11 | 41 |
future forebrain | 8.79e-11 | 41 |
central nervous system | 1.72e-10 | 81 |
brain | 2.10e-10 | 68 |
future brain | 2.10e-10 | 68 |
brain grey matter | 2.72e-10 | 34 |
gray matter | 2.72e-10 | 34 |
regional part of telencephalon | 3.73e-09 | 32 |
neurectoderm | 5.34e-08 | 86 |
cerebral hemisphere | 5.74e-08 | 32 |
telencephalon | 6.98e-08 | 34 |
neural plate | 2.20e-07 | 82 |
presumptive neural plate | 2.20e-07 | 82 |
adult organism | 3.08e-07 | 114 |
regional part of cerebral cortex | 9.57e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-10 | 235 |
disease of cellular proliferation | 8.02e-10 | 239 |
organ system cancer | 3.29e-08 | 137 |