FFCP PHASE1:Hg19::chr12:91498004..91498039,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:91498004..91498039,- | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_at_chr12:91498004..91498039,- | |||
|id=chr12:91498004..91498039,- | |||
|ontology_enrichment_celltype=CL:0000153!3.47e-08!9;CL:0000447!3.47e-08!9;CL:0000055!9.93e-08!180;CL:0002620!1.83e-07!23;CL:0000057!8.23e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.31e-14;9!CL:0000447;1.31e-14;9!CL:0000499;6.29e-10;28!CL:0000135;8.89e-10;3!CL:0000388;8.89e-10;3!CL:0000214;8.82e-09;3!CL:0002579;1.90e-08;3!CL:0000327;2.67e-08;15!CL:0000138;5.19e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.54e-14,9;CL:0000447,1.54e-14,9;CL:0000499,7.71e-10,28;CL:0000135,9.08e-10,3;CL:0000388,9.08e-10,3;CL:0000214,1.21e-08,3;CL:0000327,2.94e-08,15;CL:0002579,2.94e-08,3;CL:0000058,4.86e-08,6;CL:0000138,4.86e-08,6;CL:0000136,5.92e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.12e-07!45;UBERON:0002416!1.12e-07!45;UBERON:0003688!4.10e-07!6;UBERON:0002358!4.10e-07!6;UBERON:0003684!4.10e-07!6;UBERON:0001178!4.10e-07!6;UBERON:0004923!5.97e-07!57;UBERON:0004457!7.15e-07!12;UBERON:0000042!7.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.25e-18;9!UBERON:0000042;7.25e-18;9!UBERON:0003688;6.03e-11;6!UBERON:0002358;6.03e-11;6!UBERON:0003684;6.03e-11;6!UBERON:0001178;6.03e-11;6!UBERON:0007846;8.89e-10;3!UBERON:0000043;8.89e-10;3!UBERON:0007845;8.89e-10;3!UBERON:0006915;8.82e-09;3!UBERON:0007616;8.82e-09;3!UBERON:0002217;8.82e-09;3!UBERON:0002018;8.82e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.06e-12,12;UBERON:0000042,1.06e-12,12;UBERON:0003688,1.24e-10,6;UBERON:0002358,1.24e-10,6;UBERON:0003684,1.24e-10,6;UBERON:0001178,1.24e-10,6;UBERON:0007846,9.08e-10,3;UBERON:0000043,9.08e-10,3;UBERON:0007845,9.08e-10,3;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3;UBERON:0004923,1.34e-07,66 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.845726424575827,1.0007329835313,3.5756887554183,2.61701557230111,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0.670700859703636,0,4.69870898099936,0.50133791063589,6.51809335323707,1.5905718941022,15.5723158496843,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0,0.132409180813219,1.72101972449288,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0,1.97328599257748,4.05759038755278,0.635795703478686,0,0.515262646192195,1.8034837803194,1.67505170698431,0,0,2.01947019395292,1.93304787148829,0.161646056818812,5.32514388774922,0.806016785821122,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,2.57296375277154,0,0.928735856063958,0.721879481669586,0.591534000199219,1.01150814046861,0.723033089650446,0.661763836394364,0.435758888184812,0,0.539325232640658,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,1.03985430765404,1.96271887676878,0.473107245101804,0.117141414992713,0.601892199455438,0,1.03473071292505,0,0,1.04260337361699,0,0,0,0,0,0,3.32870879020994,0,0.744323423456331,1.53461973288062,1.12264037773229,1.02511319404561,2.55853624533352,1.44768529029247,0,0.462629081407967,0.710246901252508,0,0,0.464841513839837,0,0,0,0.803701137152247,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0.27470839445503,0.495056999523528,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.537101224341368,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0.632758849437452,1.33441135746677,0,0.42793898803392,0,0,1.2591072030832,0.274537029736055,0.706874414074119,0,0,0,0,0.243713489631284,0,0.409499734223957,1.41405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.286822704408103,0.0982490410131212,0,1.06428319221179,1.47775344708365,2.30506425071931,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,2.67268212749375,0.307160702099232,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0.153900517007594,0.569710279235006,0,0,0,3.50901275705111,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,1.9980960958213,0,0.458146384663663,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,3.0721064139948,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.35857467866569,0,2.1440859791201,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,1.60181118851542,0.157204305099666,3.31391244277756,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.447764408660622,1.16856654923612,0,0.568209015825267,0.754703705257725,2.66943366478961,0.686520205190771,0.604923695052956,0.466311601748341,0,0,0,0.155262956876259,0,1.86089200190596,0,0.751288044986092,0.380805212168795,0.406870733204662,1.81848659202559,0.214821114084977,0,0,0,2.40376993627955,2.69399591012735,0,0,0,0,0.906823702049089,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0.318004350653419,0,0,6.70084293012299,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,1.79024599904647,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,0,1.77404740325278,0,0.514464028312255,0.0679697329768317,0,0,0,0.706437835654626,0,0.280272163313789,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.846774100381858,0,0,0,0,0,0,0,0,2.3196288626764,6.31424290976881,0,0,1.30812099855325,0,0,0,0.154348316215889,0.655678681511872,0,2.45148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0510303085114,0,0,0,3.34795516350076,9.24351257262837,4.32626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.426467963801962,1.42838658878244,0,0,0.112131862580613,0.381882949668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| |||
|short_description=p@chr12:91498004..91498039,- | |||
}} |
Latest revision as of 13:28, 24 July 2015
Short description: | p@chr12:91498004..91498039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91498004..91498039, - |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.54e-14 | 9 |
carbohydrate secreting cell | 1.54e-14 | 9 |
stromal cell | 7.71e-10 | 28 |
fibrocyte | 9.08e-10 | 3 |
tendon cell | 9.08e-10 | 3 |
synovial cell | 1.21e-08 | 3 |
extracellular matrix secreting cell | 2.94e-08 | 15 |
omentum preadipocyte | 2.94e-08 | 3 |
chondroblast | 4.86e-08 | 6 |
chondrocyte | 4.86e-08 | 6 |
fat cell | 5.92e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.06e-12 | 12 |
serous membrane | 1.06e-12 | 12 |
omentum | 1.24e-10 | 6 |
peritoneum | 1.24e-10 | 6 |
abdominal cavity | 1.24e-10 | 6 |
visceral peritoneum | 1.24e-10 | 6 |
dense regular connective tissue | 9.08e-10 | 3 |
tendon | 9.08e-10 | 3 |
regular connective tissue | 9.08e-10 | 3 |
stratified squamous epithelium | 1.21e-08 | 3 |
layer of synovial tissue | 1.21e-08 | 3 |
synovial joint | 1.21e-08 | 3 |
synovial membrane of synovial joint | 1.21e-08 | 3 |
organ component layer | 1.34e-07 | 66 |